FFCP PHASE1:Hg19::chrX:24167548..24167617,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:24167548..24167617,+
|short_description=p2@ZFX
|description=CAGE_peak_2_at_ZFX_5end
|association_with_transcript=-128bp_to_ENST00000428571_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7543 | |EntrezGene=7543 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12869 | |HGNC=12869 | ||
|TSSclassifier=strong | |||
|UniProt=C9J682 | |UniProt=C9J682 | ||
|association_with_transcript=-128bp_to_ENST00000428571_5end | |||
|cluster_id=chrX:24167548..24167617,+ | |||
|description=CAGE_peak_2_at_ZFX_5end | |||
|id=chrX:24167548..24167617,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.54e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.62e-33!115;UBERON:0001049!3.11e-18!57;UBERON:0005068!3.11e-18!57;UBERON:0006241!3.11e-18!57;UBERON:0007135!3.11e-18!57;UBERON:0000073!3.14e-16!94;UBERON:0001016!3.14e-16!94;UBERON:0001017!4.63e-16!82;UBERON:0005743!7.14e-16!86;UBERON:0003080!2.35e-15!42;UBERON:0002780!6.42e-15!41;UBERON:0001890!6.42e-15!41;UBERON:0006240!6.42e-15!41;UBERON:0002616!2.10e-13!59;UBERON:0000955!4.87e-13!69;UBERON:0006238!4.87e-13!69;UBERON:0002020!1.20e-12!34;UBERON:0003528!1.20e-12!34;UBERON:0001893!2.14e-12!34;UBERON:0002791!4.53e-12!33;UBERON:0002346!1.38e-11!90;UBERON:0001869!2.12e-11!32;UBERON:0003075!3.79e-11!86;UBERON:0007284!3.79e-11!86;UBERON:0003056!4.57e-09!61;UBERON:0002619!4.93e-09!22;UBERON:0000956!1.69e-08!25;UBERON:0000203!1.69e-08!25;UBERON:0000924!2.41e-08!173;UBERON:0006601!2.41e-08!173;UBERON:0001950!5.88e-08!20;UBERON:0004121!6.06e-08!169;UBERON:0000153!2.07e-07!129;UBERON:0007811!2.07e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;4.09e-11;34!UBERON:0002020;4.09e-11;34!UBERON:0002780;8.01e-11;41!UBERON:0001890;8.01e-11;41!UBERON:0002791;1.08e-10;32!UBERON:0001893;1.10e-10;34!UBERON:0001869;2.42e-10;32!UBERON:0000073;7.63e-10;53!UBERON:0002616;7.63e-10;53!UBERON:0007023;5.16e-09;114!UBERON:0002619;6.18e-09;22!UBERON:0000956;1.22e-08;25!UBERON:0000203;1.22e-08;25!UBERON:0001950;7.84e-08;20!UBERON:0001017;5.37e-07;75!UBERON:0001016;7.28e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.29e-33,114;UBERON:0001049,3.67e-18,56;UBERON:0005068,3.67e-18,56;UBERON:0006241,3.67e-18,56;UBERON:0007135,3.67e-18,56;UBERON:0000073,1.76e-16,53;UBERON:0002616,1.76e-16,53;UBERON:0001016,2.64e-16,89;UBERON:0001017,5.60e-16,81;UBERON:0002780,3.76e-15,41;UBERON:0001890,3.76e-15,41;UBERON:0003080,3.76e-15,41;UBERON:0006240,3.76e-15,41;UBERON:0002346,1.01e-13,86;UBERON:0003075,2.77e-13,82;UBERON:0007284,2.77e-13,82;UBERON:0000955,6.46e-13,68;UBERON:0006238,6.46e-13,68;UBERON:0003528,7.72e-13,34;UBERON:0002020,7.72e-13,34;UBERON:0001893,1.39e-12,34;UBERON:0002791,8.89e-12,32;UBERON:0001869,1.43e-11,32;UBERON:0010371,3.42e-11,104;UBERON:0003056,7.56e-10,61;UBERON:0002619,3.66e-09,22;UBERON:0004121,5.97e-09,171;UBERON:0000924,5.97e-09,171;UBERON:0006601,5.97e-09,171;UBERON:0000956,1.28e-08,25;UBERON:0000203,1.28e-08,25;UBERON:0001950,4.55e-08,20;UBERON:0010314,4.70e-07,132 | |||
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| ||
|short_description=p2@ZFX | |||
}} | }} |
Latest revision as of 18:26, 24 September 2015
Short description: | p2@ZFX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZFX_5end |
Coexpression cluster: | NA |
Association with transcript: | -128bp_to_ENST00000428571_5end |
EntrezGene: | ZFX |
HGNC: | 12869 |
UniProt: | C9J682 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 6.29e-33 | 114 |
neural tube | 3.67e-18 | 56 |
neural rod | 3.67e-18 | 56 |
future spinal cord | 3.67e-18 | 56 |
neural keel | 3.67e-18 | 56 |
regional part of nervous system | 1.76e-16 | 53 |
regional part of brain | 1.76e-16 | 53 |
nervous system | 2.64e-16 | 89 |
central nervous system | 5.60e-16 | 81 |
regional part of forebrain | 3.76e-15 | 41 |
forebrain | 3.76e-15 | 41 |
anterior neural tube | 3.76e-15 | 41 |
future forebrain | 3.76e-15 | 41 |
neurectoderm | 1.01e-13 | 86 |
neural plate | 2.77e-13 | 82 |
presumptive neural plate | 2.77e-13 | 82 |
brain | 6.46e-13 | 68 |
future brain | 6.46e-13 | 68 |
brain grey matter | 7.72e-13 | 34 |
gray matter | 7.72e-13 | 34 |
telencephalon | 1.39e-12 | 34 |
regional part of telencephalon | 8.89e-12 | 32 |
cerebral hemisphere | 1.43e-11 | 32 |
ecto-epithelium | 3.42e-11 | 104 |
pre-chordal neural plate | 7.56e-10 | 61 |
regional part of cerebral cortex | 3.66e-09 | 22 |
ectoderm-derived structure | 5.97e-09 | 171 |
ectoderm | 5.97e-09 | 171 |
presumptive ectoderm | 5.97e-09 | 171 |
cerebral cortex | 1.28e-08 | 25 |
pallium | 1.28e-08 | 25 |
neocortex | 4.55e-08 | 20 |
structure with developmental contribution from neural crest | 4.70e-07 | 132 |