FFCP PHASE1:Mm9::chr18:34407302..34407307,+: Difference between revisions
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{{FFCP|EntrezGene=11789|HGNC=|MCL_coexpression_id=158|UniProt=Q8C493|association_with_transcript=-40bp_to_ENSMUST00000170195,uc008ekf.1_5end|description=CAGE_peak_6_at_Apc_5end|id=chr18:34407302..34407307,+|ontology_enrichment_celltype=CL:0000540!2.10e-14!33;CL:0000047!2.10e-14!33;CL:0000031!2.10e-14!33;CL:0000404!2.10e-14!33;CL:0000393!5.03e-11!39;CL:0000211!5.03e-11!39;CL:0002319!6.12e-11!43;CL:0000117!6.37e-11!23;CL:0000337!6.37e-11!23;CL:0000221!2.08e-10!44;CL:0000133!2.08e-10!44;CL:0000055!2.89e-08!50|ontology_enrichment_celltype_v019_2=CL:0000540,6.41e-11,33;CL:0000047,6.41e-11,33;CL:0000031,6.41e-11,33;CL:0000404,6.41e-11,33;CL:0000117,5.23e-09,23;CL:0000337,5.23e-09,23;CL:0002319,7.62e-09,43;CL:0000393,1.02e-08,39;CL:0000211,1.02e-08,39;CL:0000221,1.46e-08,44;CL:0000133,1.46e-08,44;CL:0002612,1.98e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.51e-25!75;UBERON:0001016!1.51e-25!75;UBERON:0001017!2.68e-24!73;UBERON:0005743!2.68e-24!73;UBERON:0004121!1.19e-19!102;UBERON:0000924!1.19e-19!102;UBERON:0006601!1.19e-19!102;UBERON:0002346!6.38e-19!71;UBERON:0003075!6.38e-19!71;UBERON:0007284!6.38e-19!71;UBERON:0000955!2.16e-18!50;UBERON:0006238!2.16e-18!50;UBERON:0001049!2.54e-18!52;UBERON:0005068!2.54e-18!52;UBERON:0006241!2.54e-18!52;UBERON:0007135!2.54e-18!52;UBERON:0002616!8.27e-18!49;UBERON:0002020!9.30e-17!34;UBERON:0000033!1.11e-16!63;UBERON:0002791!4.47e-15!29;UBERON:0003528!4.47e-15!29;UBERON:0001893!4.47e-15!29;UBERON:0003080!5.86e-15!40;UBERON:0003056!6.64e-15!49;UBERON:0002780!2.66e-14!39;UBERON:0001890!2.66e-14!39;UBERON:0006240!2.66e-14!39;UBERON:0000956!2.74e-10!21;UBERON:0001869!2.74e-10!21;UBERON:0000203!2.74e-10!21;UBERON:0002021!1.00e-09!10;UBERON:0000411!1.00e-09!10;UBERON:0001950!1.00e-09!10;UBERON:0002619!7.57e-09!17;UBERON:0007811!3.24e-08!86;UBERON:0000153!8.43e-08!94|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.35e-25,75;UBERON:0001017,3.94e-24,73;UBERON:0002021,1.14e-22,10;UBERON:0000411,1.14e-22,10;UBERON:0001950,1.14e-22,10;UBERON:0002020,1.22e-22,34;UBERON:0000073,1.71e-20,54;UBERON:0003528,2.83e-19,29;UBERON:0002791,2.83e-19,29;UBERON:0001893,2.83e-19,29;UBERON:0004121,3.64e-18,95;UBERON:0000924,3.64e-18,95;UBERON:0006601,3.64e-18,95;UBERON:0001049,6.34e-18,52;UBERON:0005068,6.34e-18,52;UBERON:0006241,6.34e-18,52;UBERON:0007135,6.34e-18,52;UBERON:0002619,1.15e-17,17;UBERON:0002346,2.52e-16,64;UBERON:0003075,2.52e-16,64;UBERON:0007284,2.52e-16,64;UBERON:0003080,2.56e-16,40;UBERON:0000956,4.21e-16,21;UBERON:0001869,4.21e-16,21;UBERON:0000203,4.21e-16,21;UBERON:0002616,3.16e-15,46;UBERON:0002780,4.89e-15,39;UBERON:0001890,4.89e-15,39;UBERON:0006240,4.89e-15,39;UBERON:0000955,8.55e-15,47;UBERON:0006238,8.55e-15,47;UBERON:0010371,1.54e-13,73;UBERON:0003056,1.97e-12,49;UBERON:0010314,1.79e-09,92;UBERON:0002257,1.98e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0.841299845405528,0,0.441737081903227,0.979926393719632,0.958454710182364,0,1.10115880999389,1.40456071893706,0.768032666281217,1.58263545276233,0.914876436024097,2.6045668527838,0.558365998002762,1.12552522006336,0.61119299110724,2.65165726926301,3.55929201997757,1.1183966749518,0.605809546665472,1.51143120213571,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.608930956624282,0,0,0.352766121407114,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,1.19832511523858,0.915001205637253,3.26701315493447,1.21677024134594,2.30143911597297,0.83115217823824,1.78465389374533,0,0.124406970610093,0,0,0.130120442962704,0,0.360124259610698,0.452114453507145,0.204109497453984,0.12811372028485,0.468508622798644,0.258703370739016,0.215567992932842,0,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0,0.292399974850665,0,0.134206418760372,1.05144974282064,2.6755199218614,0,0,0,0.696710015581316,0,0,0,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.456994050438915,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0,0.321101179975584,1.52375192569864,0,0,0.94652465824877,1.17131623288992,1.29254038639679,0,0.891194696329576,1.13230612315533,0.404810701674894,0.584511715822624,1.18586333383957,0.963963949265421,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0.388076051348264,0,0,0.891844088010353,0.329098041204242,0,0,0,0,0,0,0.241251699712623,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.627264888043406,0,0,0.165306911450672,0,0,0,0,0,0,0,0.258319646955462,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0,0,0.183151624267265,0,0,6.7770221114048,8.74617949363636,7.44764167471216,3.26521046453006,2.05524755931193,3.7769694869485,2.02506750069542,2.2516060161211,1.81256963593682,1.55328093525546,0.31136204275253,0.798049746802062,0.512200817262403,1.21553358534147,0.628839487883947,0.735374033800057,0.888986911206461,0.412070114477788,0.962757628775446,0.505394423527595,0.25347929989024,1.32038438970253,0.37456602987953,0.704276676453562,0.689225627467359,0.476293691283074,0.463537303779422,0.38581844092741,0,1.03039244094078,0.685738504770831,0.532427418478012,0.715308569841963,0.581385666529314,0.470546902076653,1.09998990259179,1.09756783723664,1.05227884575137,0.407412341537585,1.12228454331548,0.593175090620871,0.492522411877817,1.63692417267876,1.08455788830176,0.578719832943424,0.999242311751784,0.701794825336225,0,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p6@Apc}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11789 | |||
|HGNC= | |||
|MCL_coexpression_id=158 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C493 | |||
|association_with_transcript=-40bp_to_ENSMUST00000170195,uc008ekf.1_5end | |||
|cluster_id=chr18:34407302..34407307,+ | |||
|description=CAGE_peak_6_at_Apc_5end | |||
|id=chr18:34407302..34407307,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.10e-14!33;CL:0000047!2.10e-14!33;CL:0000031!2.10e-14!33;CL:0000404!2.10e-14!33;CL:0000393!5.03e-11!39;CL:0000211!5.03e-11!39;CL:0002319!6.12e-11!43;CL:0000117!6.37e-11!23;CL:0000337!6.37e-11!23;CL:0000221!2.08e-10!44;CL:0000133!2.08e-10!44;CL:0000055!2.89e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.41e-11,33;CL:0000047,6.41e-11,33;CL:0000031,6.41e-11,33;CL:0000404,6.41e-11,33;CL:0000117,5.23e-09,23;CL:0000337,5.23e-09,23;CL:0002319,7.62e-09,43;CL:0000393,1.02e-08,39;CL:0000211,1.02e-08,39;CL:0000221,1.46e-08,44;CL:0000133,1.46e-08,44;CL:0002612,1.98e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.51e-25!75;UBERON:0001016!1.51e-25!75;UBERON:0001017!2.68e-24!73;UBERON:0005743!2.68e-24!73;UBERON:0004121!1.19e-19!102;UBERON:0000924!1.19e-19!102;UBERON:0006601!1.19e-19!102;UBERON:0002346!6.38e-19!71;UBERON:0003075!6.38e-19!71;UBERON:0007284!6.38e-19!71;UBERON:0000955!2.16e-18!50;UBERON:0006238!2.16e-18!50;UBERON:0001049!2.54e-18!52;UBERON:0005068!2.54e-18!52;UBERON:0006241!2.54e-18!52;UBERON:0007135!2.54e-18!52;UBERON:0002616!8.27e-18!49;UBERON:0002020!9.30e-17!34;UBERON:0000033!1.11e-16!63;UBERON:0002791!4.47e-15!29;UBERON:0003528!4.47e-15!29;UBERON:0001893!4.47e-15!29;UBERON:0003080!5.86e-15!40;UBERON:0003056!6.64e-15!49;UBERON:0002780!2.66e-14!39;UBERON:0001890!2.66e-14!39;UBERON:0006240!2.66e-14!39;UBERON:0000956!2.74e-10!21;UBERON:0001869!2.74e-10!21;UBERON:0000203!2.74e-10!21;UBERON:0002021!1.00e-09!10;UBERON:0000411!1.00e-09!10;UBERON:0001950!1.00e-09!10;UBERON:0002619!7.57e-09!17;UBERON:0007811!3.24e-08!86;UBERON:0000153!8.43e-08!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.35e-25,75;UBERON:0001017,3.94e-24,73;UBERON:0002021,1.14e-22,10;UBERON:0000411,1.14e-22,10;UBERON:0001950,1.14e-22,10;UBERON:0002020,1.22e-22,34;UBERON:0000073,1.71e-20,54;UBERON:0003528,2.83e-19,29;UBERON:0002791,2.83e-19,29;UBERON:0001893,2.83e-19,29;UBERON:0004121,3.64e-18,95;UBERON:0000924,3.64e-18,95;UBERON:0006601,3.64e-18,95;UBERON:0001049,6.34e-18,52;UBERON:0005068,6.34e-18,52;UBERON:0006241,6.34e-18,52;UBERON:0007135,6.34e-18,52;UBERON:0002619,1.15e-17,17;UBERON:0002346,2.52e-16,64;UBERON:0003075,2.52e-16,64;UBERON:0007284,2.52e-16,64;UBERON:0003080,2.56e-16,40;UBERON:0000956,4.21e-16,21;UBERON:0001869,4.21e-16,21;UBERON:0000203,4.21e-16,21;UBERON:0002616,3.16e-15,46;UBERON:0002780,4.89e-15,39;UBERON:0001890,4.89e-15,39;UBERON:0006240,4.89e-15,39;UBERON:0000955,8.55e-15,47;UBERON:0006238,8.55e-15,47;UBERON:0010371,1.54e-13,73;UBERON:0003056,1.97e-12,49;UBERON:0010314,1.79e-09,92;UBERON:0002257,1.98e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0.841299845405528,0,0.441737081903227,0.979926393719632,0.958454710182364,0,1.10115880999389,1.40456071893706,0.768032666281217,1.58263545276233,0.914876436024097,2.6045668527838,0.558365998002762,1.12552522006336,0.61119299110724,2.65165726926301,3.55929201997757,1.1183966749518,0.605809546665472,1.51143120213571,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.608930956624282,0,0,0.352766121407114,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,1.19832511523858,0.915001205637253,3.26701315493447,1.21677024134594,2.30143911597297,0.83115217823824,1.78465389374533,0,0.124406970610093,0,0,0.130120442962704,0,0.360124259610698,0.452114453507145,0.204109497453984,0.12811372028485,0.468508622798644,0.258703370739016,0.215567992932842,0,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0,0.292399974850665,0,0.134206418760372,1.05144974282064,2.6755199218614,0,0,0,0.696710015581316,0,0,0,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0,0,0,0,0,0.456994050438915,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0,0.321101179975584,1.52375192569864,0,0,0.94652465824877,1.17131623288992,1.29254038639679,0,0.891194696329576,1.13230612315533,0.404810701674894,0.584511715822624,1.18586333383957,0.963963949265421,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0.388076051348264,0,0,0.891844088010353,0.329098041204242,0,0,0,0,0,0,0.241251699712623,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.627264888043406,0,0,0.165306911450672,0,0,0,0,0,0,0,0.258319646955462,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0,0,0.183151624267265,0,0,6.7770221114048,8.74617949363636,7.44764167471216,3.26521046453006,2.05524755931193,3.7769694869485,2.02506750069542,2.2516060161211,1.81256963593682,1.55328093525546,0.31136204275253,0.798049746802062,0.512200817262403,1.21553358534147,0.628839487883947,0.735374033800057,0.888986911206461,0.412070114477788,0.962757628775446,0.505394423527595,0.25347929989024,1.32038438970253,0.37456602987953,0.704276676453562,0.689225627467359,0.476293691283074,0.463537303779422,0.38581844092741,0,1.03039244094078,0.685738504770831,0.532427418478012,0.715308569841963,0.581385666529314,0.470546902076653,1.09998990259179,1.09756783723664,1.05227884575137,0.407412341537585,1.12228454331548,0.593175090620871,0.492522411877817,1.63692417267876,1.08455788830176,0.578719832943424,0.999242311751784,0.701794825336225,0,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p6@Apc | |||
}} |
Latest revision as of 04:07, 27 September 2015
Short description: | p6@Apc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Apc_5end |
Coexpression cluster: | MCL_coexpression_mm9:158 |
Association with transcript: | -40bp_to_ENSMUST00000170195, uc008ekf.1_5end |
EntrezGene: | Apc |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.41e-11 | 33 |
neuronal stem cell | 6.41e-11 | 33 |
neuroblast | 6.41e-11 | 33 |
electrically signaling cell | 6.41e-11 | 33 |
CNS neuron (sensu Vertebrata) | 5.23e-09 | 23 |
neuroblast (sensu Vertebrata) | 5.23e-09 | 23 |
neural cell | 7.62e-09 | 43 |
electrically responsive cell | 1.02e-08 | 39 |
electrically active cell | 1.02e-08 | 39 |
ectodermal cell | 1.46e-08 | 44 |
neurectodermal cell | 1.46e-08 | 44 |
neuron of the ventral spinal cord | 1.98e-07 | 3 |