FFCP PHASE1:Hg19::chr5:81046859..81046902,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23635 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15831 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z1J2,E9PDA8 | |||
|association_with_transcript=0bp_to_ENST00000505980,ENST00000509053_5end | |||
|cluster_id=chr5:81046859..81046902,- | |||
|coexpression_cluster_id=C4522 | |||
|description=CAGE_peak_1_at_SSBP2_5end | |||
|id=chr5:81046859..81046902,- | |||
|ontology_enrichment_celltype=CL:0000945!1.85e-09!24;CL:0000826!1.85e-09!24;CL:0000542!2.01e-09!53;CL:0000051!2.01e-09!53;CL:0000838!4.50e-09!52;CL:0000236!2.71e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.83e-09;24!CL:0000236;1.31e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.85e-09,24;CL:0000826,1.85e-09,24;CL:0000542,2.01e-09,53;CL:0000051,2.01e-09,53;CL:0000838,4.49e-09,52;CL:0000236,2.70e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.32e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.30e-29!115;UBERON:0001049!1.08e-21!57;UBERON:0005068!1.08e-21!57;UBERON:0006241!1.08e-21!57;UBERON:0007135!1.08e-21!57;UBERON:0001017!2.27e-21!82;UBERON:0005743!9.69e-21!86;UBERON:0000955!1.32e-20!69;UBERON:0006238!1.32e-20!69;UBERON:0002616!3.16e-20!59;UBERON:0000073!2.80e-18!94;UBERON:0001016!2.80e-18!94;UBERON:0003080!3.06e-17!42;UBERON:0002780!4.02e-17!41;UBERON:0001890!4.02e-17!41;UBERON:0006240!4.02e-17!41;UBERON:0002020!4.19e-15!34;UBERON:0003528!4.19e-15!34;UBERON:0001893!7.64e-15!34;UBERON:0002791!1.78e-14!33;UBERON:0001869!3.80e-14!32;UBERON:0003075!1.09e-13!86;UBERON:0007284!1.09e-13!86;UBERON:0002346!2.02e-13!90;UBERON:0000153!3.37e-13!129;UBERON:0007811!3.37e-13!129;UBERON:0000033!7.07e-12!123;UBERON:0003056!2.70e-11!61;UBERON:0000956!5.05e-11!25;UBERON:0000203!5.05e-11!25;UBERON:0002619!9.09e-11!22;UBERON:0001950!2.91e-10!20;UBERON:0004121!3.36e-10!169;UBERON:0000924!3.50e-10!173;UBERON:0006601!3.50e-10!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;4.53e-13;34!UBERON:0002020;4.53e-13;34!UBERON:0002791;5.46e-13;32!UBERON:0001869;7.20e-13;32!UBERON:0001893;8.93e-13;34!UBERON:0002780;1.49e-12;41!UBERON:0001890;1.49e-12;41!UBERON:0000073;2.06e-12;53!UBERON:0002616;2.06e-12;53!UBERON:0000956;4.94e-11;25!UBERON:0000203;4.94e-11;25!UBERON:0002619;8.82e-11;22!UBERON:0001950;2.80e-10;20!UBERON:0001017;5.03e-10;75!UBERON:0000955;5.39e-10;68!UBERON:0001016;1.08e-08;83!UBERON:0007023;3.96e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.36e-28,114;UBERON:0001049,1.46e-21,56;UBERON:0005068,1.46e-21,56;UBERON:0006241,1.46e-21,56;UBERON:0007135,1.46e-21,56;UBERON:0001017,3.35e-21,81;UBERON:0000073,1.74e-20,53;UBERON:0002616,1.74e-20,53;UBERON:0000955,1.90e-20,68;UBERON:0006238,1.90e-20,68;UBERON:0001016,1.42e-18,89;UBERON:0002780,4.02e-17,41;UBERON:0001890,4.02e-17,41;UBERON:0003080,4.02e-17,41;UBERON:0006240,4.02e-17,41;UBERON:0003075,1.83e-15,82;UBERON:0007284,1.83e-15,82;UBERON:0002346,4.06e-15,86;UBERON:0003528,4.18e-15,34;UBERON:0002020,4.18e-15,34;UBERON:0001893,7.63e-15,34;UBERON:0002791,3.00e-14,32;UBERON:0001869,3.80e-14,32;UBERON:0004121,1.69e-11,171;UBERON:0000924,1.69e-11,171;UBERON:0006601,1.69e-11,171;UBERON:0000956,5.05e-11,25;UBERON:0000203,5.05e-11,25;UBERON:0003056,6.07e-11,61;UBERON:0002619,9.08e-11,22;UBERON:0010371,2.18e-10,104;UBERON:0001950,2.90e-10,20;UBERON:0010314,1.82e-07,132 | |||
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| |||
|short_description=p1@SSBP2 | |||
}} |
Latest revision as of 23:43, 18 September 2015
Short description: | p1@SSBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SSBP2_5end |
Coexpression cluster: | C4522_non_parietal_occipital_thymus_temporal_duodenum_Hodgkin |
Association with transcript: | 0bp_to_ENST00000505980, ENST00000509053_5end |
EntrezGene: | SSBP2 |
HGNC: | 15831 |
UniProt: | B7Z1J2E9PDA8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.85e-09 | 24 |
pro-B cell | 1.85e-09 | 24 |
lymphocyte | 2.01e-09 | 53 |
common lymphoid progenitor | 2.01e-09 | 53 |
lymphoid lineage restricted progenitor cell | 4.49e-09 | 52 |
B cell | 2.70e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.36e-28 | 114 |
neural tube | 1.46e-21 | 56 |
neural rod | 1.46e-21 | 56 |
future spinal cord | 1.46e-21 | 56 |
neural keel | 1.46e-21 | 56 |
central nervous system | 3.35e-21 | 81 |
regional part of nervous system | 1.74e-20 | 53 |
regional part of brain | 1.74e-20 | 53 |
brain | 1.90e-20 | 68 |
future brain | 1.90e-20 | 68 |
nervous system | 1.42e-18 | 89 |
regional part of forebrain | 4.02e-17 | 41 |
forebrain | 4.02e-17 | 41 |
anterior neural tube | 4.02e-17 | 41 |
future forebrain | 4.02e-17 | 41 |
neural plate | 1.83e-15 | 82 |
presumptive neural plate | 1.83e-15 | 82 |
neurectoderm | 4.06e-15 | 86 |
brain grey matter | 4.18e-15 | 34 |
gray matter | 4.18e-15 | 34 |
telencephalon | 7.63e-15 | 34 |
regional part of telencephalon | 3.00e-14 | 32 |
cerebral hemisphere | 3.80e-14 | 32 |
ectoderm-derived structure | 1.69e-11 | 171 |
ectoderm | 1.69e-11 | 171 |
presumptive ectoderm | 1.69e-11 | 171 |
cerebral cortex | 5.05e-11 | 25 |
pallium | 5.05e-11 | 25 |
pre-chordal neural plate | 6.07e-11 | 61 |
regional part of cerebral cortex | 9.08e-11 | 22 |
ecto-epithelium | 2.18e-10 | 104 |
neocortex | 2.90e-10 | 20 |
structure with developmental contribution from neural crest | 1.82e-07 | 132 |