FFCP PHASE1:Hg19::chr6:3000057..3000118,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4835 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7856 | |||
|TSSclassifier=strong | |||
|UniProt=Q5TD05,P16083 | |||
|association_with_transcript=0bp_to_ENST00000397717,NM_000904,uc003mus.2,uc003mut.2_5end | |||
|cluster_id=chr6:3000057..3000118,+ | |||
|description=CAGE_peak_1_at_NQO2_5end | |||
|id=chr6:3000057..3000118,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.58e-11!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!1.00e-10!59;UBERON:0001049!1.33e-10!57;UBERON:0005068!1.33e-10!57;UBERON:0006241!1.33e-10!57;UBERON:0007135!1.33e-10!57;UBERON:0000955!2.47e-10!69;UBERON:0006238!2.47e-10!69;UBERON:0001017!3.98e-10!82;UBERON:0005743!7.75e-10!86;UBERON:0000073!3.21e-09!94;UBERON:0001016!3.21e-09!94;UBERON:0003075!9.53e-09!86;UBERON:0007284!9.53e-09!86;UBERON:0002346!1.77e-08!90;UBERON:0001869!2.62e-08!32;UBERON:0007023!4.24e-08!115;UBERON:0002020!4.48e-08!34;UBERON:0003528!4.48e-08!34;UBERON:0000033!9.84e-08!123;UBERON:0001893!1.32e-07!34;UBERON:0003080!2.03e-07!42;UBERON:0002791!2.54e-07!33;UBERON:0002780!3.38e-07!41;UBERON:0001890!3.38e-07!41;UBERON:0006240!3.38e-07!41;UBERON:0004121!4.17e-07!169;UBERON:0000924!5.11e-07!173;UBERON:0006601!5.11e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.12e-07;32!UBERON:0003528;3.06e-07;34!UBERON:0002020;3.06e-07;34!UBERON:0001893;3.61e-07;34!UBERON:0002791;3.96e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.27e-10,56;UBERON:0005068,2.27e-10,56;UBERON:0006241,2.27e-10,56;UBERON:0007135,2.27e-10,56;UBERON:0000073,2.67e-10,53;UBERON:0002616,2.67e-10,53;UBERON:0000955,4.14e-10,68;UBERON:0006238,4.14e-10,68;UBERON:0001017,6.46e-10,81;UBERON:0001016,3.04e-09,89;UBERON:0010314,4.17e-09,132;UBERON:0003075,6.45e-09,82;UBERON:0007284,6.45e-09,82;UBERON:0002346,1.26e-08,86;UBERON:0001869,2.62e-08,32;UBERON:0003528,4.48e-08,34;UBERON:0002020,4.48e-08,34;UBERON:0007023,7.60e-08,114;UBERON:0001893,1.32e-07,34;UBERON:0002791,1.35e-07,32;UBERON:0002780,3.38e-07,41;UBERON:0001890,3.38e-07,41;UBERON:0003080,3.38e-07,41;UBERON:0006240,3.38e-07,41;UBERON:0004121,8.02e-07,171;UBERON:0000924,8.02e-07,171;UBERON:0006601,8.02e-07,171 | |||
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| |||
|short_description=p1@NQO2 | |||
}} |
Latest revision as of 15:14, 17 September 2015
Short description: | p1@NQO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NQO2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000397717, NM_000904, uc003mus.2, uc003mut.2_5end |
EntrezGene: | NQO2 |
HGNC: | 7856 |
UniProt: | Q5TD05P16083 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 2.27e-10 | 56 |
neural rod | 2.27e-10 | 56 |
future spinal cord | 2.27e-10 | 56 |
neural keel | 2.27e-10 | 56 |
regional part of nervous system | 2.67e-10 | 53 |
regional part of brain | 2.67e-10 | 53 |
brain | 4.14e-10 | 68 |
future brain | 4.14e-10 | 68 |
central nervous system | 6.46e-10 | 81 |
nervous system | 3.04e-09 | 89 |
structure with developmental contribution from neural crest | 4.17e-09 | 132 |
neural plate | 6.45e-09 | 82 |
presumptive neural plate | 6.45e-09 | 82 |
neurectoderm | 1.26e-08 | 86 |
cerebral hemisphere | 2.62e-08 | 32 |
brain grey matter | 4.48e-08 | 34 |
gray matter | 4.48e-08 | 34 |
adult organism | 7.60e-08 | 114 |
telencephalon | 1.32e-07 | 34 |
regional part of telencephalon | 1.35e-07 | 32 |
regional part of forebrain | 3.38e-07 | 41 |
forebrain | 3.38e-07 | 41 |
anterior neural tube | 3.38e-07 | 41 |
future forebrain | 3.38e-07 | 41 |
ectoderm-derived structure | 8.02e-07 | 171 |
ectoderm | 8.02e-07 | 171 |
presumptive ectoderm | 8.02e-07 | 171 |