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FFCP PHASE1:Mm9::chr2:151566958..151566962,-: Difference between revisions

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{{FFCP|EntrezGene=228769|HGNC=|UniProt=D6REH2,A2AU35,Q8BHL8,A2VCP7|association_with_transcript=66bp_to_ENSMUST00000123449,ENSMUST00000155939,NM_212446,uc008nek.1,uc008nel.1,uc008nem.1_5end|description=CAGE_peak_7_at_Psmf1_5end|id=chr2:151566958..151566962,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002612,1.12e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.68e-11!71;UBERON:0003075!1.68e-11!71;UBERON:0007284!1.68e-11!71;UBERON:0002020!8.70e-11!34;UBERON:0001049!9.19e-11!52;UBERON:0005068!9.19e-11!52;UBERON:0006241!9.19e-11!52;UBERON:0007135!9.19e-11!52;UBERON:0000153!3.74e-10!94;UBERON:0001017!1.89e-09!73;UBERON:0005743!1.89e-09!73;UBERON:0007811!2.44e-09!86;UBERON:0000073!3.42e-09!75;UBERON:0001016!3.42e-09!75;UBERON:0002619!5.44e-09!17;UBERON:0004121!5.53e-09!102;UBERON:0000924!5.53e-09!102;UBERON:0006601!5.53e-09!102;UBERON:0000956!1.31e-08!21;UBERON:0001869!1.31e-08!21;UBERON:0000203!1.31e-08!21;UBERON:0003056!2.09e-08!49;UBERON:0002791!3.50e-08!29;UBERON:0003528!3.50e-08!29;UBERON:0001893!3.50e-08!29;UBERON:0002780!4.29e-08!39;UBERON:0001890!4.29e-08!39;UBERON:0006240!4.29e-08!39;UBERON:0002616!5.08e-08!49;UBERON:0003080!6.74e-08!40;UBERON:0000033!1.06e-07!63;UBERON:0000955!1.87e-07!50;UBERON:0006238!1.87e-07!50;UBERON:0002021!4.49e-07!10;UBERON:0000411!4.49e-07!10;UBERON:0001950!4.49e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.64e-18,34;UBERON:0002021,1.44e-15,10;UBERON:0000411,1.44e-15,10;UBERON:0001950,1.44e-15,10;UBERON:0001049,4.82e-15,52;UBERON:0005068,4.82e-15,52;UBERON:0006241,4.82e-15,52;UBERON:0007135,4.82e-15,52;UBERON:0001017,2.46e-14,73;UBERON:0000073,2.62e-14,54;UBERON:0001016,8.38e-14,75;UBERON:0002346,1.33e-12,64;UBERON:0003075,1.33e-12,64;UBERON:0007284,1.33e-12,64;UBERON:0003528,3.13e-12,29;UBERON:0002791,3.13e-12,29;UBERON:0001893,3.13e-12,29;UBERON:0002780,1.79e-11,39;UBERON:0001890,1.79e-11,39;UBERON:0006240,1.79e-11,39;UBERON:0003080,4.24e-11,40;UBERON:0002619,5.89e-11,17;UBERON:0002616,1.09e-10,46;UBERON:0000956,1.73e-10,21;UBERON:0001869,1.73e-10,21;UBERON:0000203,1.73e-10,21;UBERON:0010371,1.94e-10,73;UBERON:0000955,2.22e-10,47;UBERON:0006238,2.22e-10,47;UBERON:0004121,1.01e-09,95;UBERON:0000924,1.01e-09,95;UBERON:0006601,1.01e-09,95;UBERON:0003056,1.99e-08,49;UBERON:0001948,4.58e-08,5;UBERON:0002315,4.58e-08,5;UBERON:0002257,1.12e-07,3;UBERON:0010314,2.77e-07,92;UBERON:0000025,2.91e-07,114|phase1_expression=0.640595388419176,0.697950815278722,0,0,0,0,0.467225281191051,0.387369970324729,0.703943610758334,1.17032263160997,0.34243593645101,0.478632953972018,0.171200729931206,0.262261207256992,0,0,0,0.315462165358238,0.137114433605739,0.42438965179803,0.425216450755349,0.0992909512008853,0.261199789138935,0.159992422793407,0.22940928106717,0,0,0.430942465371778,0,0.252030129759931,0.443461021310609,1.27006134691926,0.61506478758457,0,0,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0.405507724878058,1.10128051297009,1.56478268869608,0.436050312760893,0.439372365468944,0.777719596297134,0.55994568650145,0,0,0.725362142011344,1.00828139742739,0.257259436035947,0.85960031981627,0.515672092277442,0.809265843438391,1.05798195854407,0,0,0.889294796111139,0,0,0,0,1.15265491596466,0.311068836925433,0.540023753326763,0.210324961351382,0.856952953211411,1.76694832761291,0.734944795289724,0.670918297127655,0.919218786610021,0,0.510749352340751,0.46081959976873,0.791317726381163,1.55528994124096,0,0.279182999001381,1.12552522006336,0.30559649555362,1.17851434189467,1.13897344639282,1.4911955666024,0.151452386666368,0.453429360640713,0,0,0.679971333707751,0,0,0.448026887097336,0.140444420131752,0.340860645156116,0.779358013808606,1.06001872353102,0.14084341977668,0,0,0,0.432982082022428,0,0.505524445014783,0.34255163915718,0.258937883647172,0.593768556259299,0.173485326766136,0.608930956624282,0.230615497256059,0.301445281105245,0.705532242814229,0.376999773989026,0.247194967734374,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0.83778682725382,0.255457055208591,0.359445373517761,0,0.381210681219194,0.299581278809645,0,1.88481528169297,1.21677024134594,0.511430914660661,0.62336413367868,0.162241263067758,0.407357455401265,0.497627882440372,0,0.210441855886474,0.520481771850815,0.919608417733892,0.720248519221397,0.30140963567143,0.476255494059295,0.896796041993948,0.749613796477831,0,0.862271971731369,0.567318240503458,0.703804496655795,0.43839146485515,0.834141747676794,0.348252166522167,0.205782136407943,0.59710280045548,0,0.51469581422943,0.284163499395593,0.207125772535502,0.469052119962192,0,0.473489471170421,0,0.154267112887378,0.465067889500816,0,0.467061369468678,0.493679549740441,0.164167464079095,0.324275238183423,0.146199987425332,0.219550115291051,0.268412837520744,0.630869845692382,1.9551876352064,0.991256348951394,0.264450566663544,0.853153002140936,0,0.128867461322093,0,0,0.570676878337677,0,0.823494773620054,0.754005626400808,0.397912944082302,0.5848922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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=228769
|HGNC=
|TSSclassifier=NA
|UniProt=D6REH2,A2AU35,Q8BHL8,A2VCP7
|association_with_transcript=66bp_to_ENSMUST00000123449,ENSMUST00000155939,NM_212446,uc008nek.1,uc008nel.1,uc008nem.1_5end
|cluster_id=chr2:151566958..151566962,-
|description=CAGE_peak_7_at_Psmf1_5end
|id=chr2:151566958..151566962,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002612,1.12e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.68e-11!71;UBERON:0003075!1.68e-11!71;UBERON:0007284!1.68e-11!71;UBERON:0002020!8.70e-11!34;UBERON:0001049!9.19e-11!52;UBERON:0005068!9.19e-11!52;UBERON:0006241!9.19e-11!52;UBERON:0007135!9.19e-11!52;UBERON:0000153!3.74e-10!94;UBERON:0001017!1.89e-09!73;UBERON:0005743!1.89e-09!73;UBERON:0007811!2.44e-09!86;UBERON:0000073!3.42e-09!75;UBERON:0001016!3.42e-09!75;UBERON:0002619!5.44e-09!17;UBERON:0004121!5.53e-09!102;UBERON:0000924!5.53e-09!102;UBERON:0006601!5.53e-09!102;UBERON:0000956!1.31e-08!21;UBERON:0001869!1.31e-08!21;UBERON:0000203!1.31e-08!21;UBERON:0003056!2.09e-08!49;UBERON:0002791!3.50e-08!29;UBERON:0003528!3.50e-08!29;UBERON:0001893!3.50e-08!29;UBERON:0002780!4.29e-08!39;UBERON:0001890!4.29e-08!39;UBERON:0006240!4.29e-08!39;UBERON:0002616!5.08e-08!49;UBERON:0003080!6.74e-08!40;UBERON:0000033!1.06e-07!63;UBERON:0000955!1.87e-07!50;UBERON:0006238!1.87e-07!50;UBERON:0002021!4.49e-07!10;UBERON:0000411!4.49e-07!10;UBERON:0001950!4.49e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.64e-18,34;UBERON:0002021,1.44e-15,10;UBERON:0000411,1.44e-15,10;UBERON:0001950,1.44e-15,10;UBERON:0001049,4.82e-15,52;UBERON:0005068,4.82e-15,52;UBERON:0006241,4.82e-15,52;UBERON:0007135,4.82e-15,52;UBERON:0001017,2.46e-14,73;UBERON:0000073,2.62e-14,54;UBERON:0001016,8.38e-14,75;UBERON:0002346,1.33e-12,64;UBERON:0003075,1.33e-12,64;UBERON:0007284,1.33e-12,64;UBERON:0003528,3.13e-12,29;UBERON:0002791,3.13e-12,29;UBERON:0001893,3.13e-12,29;UBERON:0002780,1.79e-11,39;UBERON:0001890,1.79e-11,39;UBERON:0006240,1.79e-11,39;UBERON:0003080,4.24e-11,40;UBERON:0002619,5.89e-11,17;UBERON:0002616,1.09e-10,46;UBERON:0000956,1.73e-10,21;UBERON:0001869,1.73e-10,21;UBERON:0000203,1.73e-10,21;UBERON:0010371,1.94e-10,73;UBERON:0000955,2.22e-10,47;UBERON:0006238,2.22e-10,47;UBERON:0004121,1.01e-09,95;UBERON:0000924,1.01e-09,95;UBERON:0006601,1.01e-09,95;UBERON:0003056,1.99e-08,49;UBERON:0001948,4.58e-08,5;UBERON:0002315,4.58e-08,5;UBERON:0002257,1.12e-07,3;UBERON:0010314,2.77e-07,92;UBERON:0000025,2.91e-07,114
|phase1_expression=0.640595388419176,0.697950815278722,0,0,0,0,0.467225281191051,0.387369970324729,0.703943610758334,1.17032263160997,0.34243593645101,0.478632953972018,0.171200729931206,0.262261207256992,0,0,0,0.315462165358238,0.137114433605739,0.42438965179803,0.425216450755349,0.0992909512008853,0.261199789138935,0.159992422793407,0.22940928106717,0,0,0.430942465371778,0,0.252030129759931,0.443461021310609,1.27006134691926,0.61506478758457,0,0,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0.405507724878058,1.10128051297009,1.56478268869608,0.436050312760893,0.439372365468944,0.777719596297134,0.55994568650145,0,0,0.725362142011344,1.00828139742739,0.257259436035947,0.85960031981627,0.515672092277442,0.809265843438391,1.05798195854407,0,0,0.889294796111139,0,0,0,0,1.15265491596466,0.311068836925433,0.540023753326763,0.210324961351382,0.856952953211411,1.76694832761291,0.734944795289724,0.670918297127655,0.919218786610021,0,0.510749352340751,0.46081959976873,0.791317726381163,1.55528994124096,0,0.279182999001381,1.12552522006336,0.30559649555362,1.17851434189467,1.13897344639282,1.4911955666024,0.151452386666368,0.453429360640713,0,0,0.679971333707751,0,0,0.448026887097336,0.140444420131752,0.340860645156116,0.779358013808606,1.06001872353102,0.14084341977668,0,0,0,0.432982082022428,0,0.505524445014783,0.34255163915718,0.258937883647172,0.593768556259299,0.173485326766136,0.608930956624282,0.230615497256059,0.301445281105245,0.705532242814229,0.376999773989026,0.247194967734374,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0,0.83778682725382,0.255457055208591,0.359445373517761,0,0.381210681219194,0.299581278809645,0,1.88481528169297,1.21677024134594,0.511430914660661,0.62336413367868,0.162241263067758,0.407357455401265,0.497627882440372,0,0.210441855886474,0.520481771850815,0.919608417733892,0.720248519221397,0.30140963567143,0.476255494059295,0.896796041993948,0.749613796477831,0,0.862271971731369,0.567318240503458,0.703804496655795,0.43839146485515,0.834141747676794,0.348252166522167,0.205782136407943,0.59710280045548,0,0.51469581422943,0.284163499395593,0.207125772535502,0.469052119962192,0,0.473489471170421,0,0.154267112887378,0.465067889500816,0,0.467061369468678,0.493679549740441,0.164167464079095,0.324275238183423,0.146199987425332,0.219550115291051,0.268412837520744,0.630869845692382,1.9551876352064,0.991256348951394,0.264450566663544,0.853153002140936,0,0.128867461322093,0,0,0.570676878337677,0,0.823494773620054,0.754005626400808,0.397912944082302,0.58489226135736,0,0.216138049874694,0.199141273254367,0.379335801906163,0.456994050438915,0,0,0.193952487167626,0.420814919341911,0,0.295220295959204,0.31399745568275,0.246794327843601,0.592905254174298,0.500535317148282,0.982794975566015,0.899448449539415,0,0.241177159752417,0.50925170356284,1.15078454980324,0.648540907100142,1.37280706594041,0,1.48856379067401,0,0.252578877947112,0,0,0.184753190166605,0.568474235311454,0.488894929326078,0,0.234690248288502,0.167506257441816,0,0,0.630540576424764,0.44292937929755,0.318909537314974,0,0.345369963731791,0,0,0,0.491764273019036,0.551873492609465,0.642202359951168,0.468846746368813,0.327869890753351,0,0.94652465824877,0,1.07711698866399,0,0.445597348164788,0,0.809621403349789,0.292255857911312,1.58115111178609,0,0.425820255624806,0.712262414669021,0.488660878060728,0,1.32745138339963,0.485561272309963,0.604647113929502,0,0.885905678642318,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,0,1.03135543248187,1.70219802876894,0.720244376125241,0,0.643011105094777,0.177340233642274,0.535106452806212,0.164549020602121,1.2178597964584,0.23467170806371,0,0.441056796109924,0.32977250588296,0.322928853391811,0.301564624640779,0.119372344003136,0.164140899745061,0.291480836629851,0.370850604021019,0.341741761595705,0.206386867963223,0.185194527369712,0.565105371014073,0.820165366326151,0.457556346413045,0.169978429993855,0.139951452323658,0.138199973804424,0,0.474503990371703,0.203319467126849,0,0,0.218362563746178,0.269728692769641,0.0826534557253359,0,0,0.621339313086926,1.69107881605257,0,0.496375471371293,0.777804753376191,0.645799117388655,0.168956125490778,0.352071715937262,0.651021924219751,0.524296722128554,1.20792060413003,0,0.632022241256357,0.608175645870493,0.513554785824136,0.389762468933385,0.537080087002444,0.39736270956253,0.600977247599844,0.738447635872886,1.21159739937777,0.990688486514998,1.10908803650525,0.38983152295901,0.481059208201647,0.584384510907845,0,0.443971906748129,0.448569283047378,0.335769232728157,0,0.375364950902364,0.36630324853453,0.428736758158132,0,1.12950368523413,0.920650473014354,0.572895513439397,1.71853182343688,1.37016503954128,2.2661816921691,1.35004500046361,2.2516060161211,1.35942722695261,2.07104124700728,0.518936737920883,0,0.341467211508268,0.243106717068294,0.838452650511929,0.183843508450014,0,0,0,0.505394423527595,0.760437899670719,0,0.280924522409647,0.320125762024346,0.34461281373368,0,0,0.578727661391115,0.412085900803307,0.147198920134397,0,0.354951612318675,0.238436189947321,0.290692833264657,0.282328141245992,0.338458431566706,0.182927972872773,0.526139422875686,0.271608227691724,0,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0.382576664137687,0,0.695603506861264
|short_description=p7@Psmf1
}}

Latest revision as of 21:41, 25 September 2015

Short description:p7@Psmf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Psmf1_5end
Coexpression cluster:NA
Association with transcript: 66bp_to_ENSMUST00000123449, ENSMUST00000155939, NM_212446, uc008nek.1, uc008nel.1, uc008nem.1_5end
EntrezGene:Psmf1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Psmf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E41.11
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron of the ventral spinal cord1.12e-073

Uber anatomy
Ontology termp-valuen
gray matter7.64e-1834
occipital lobe1.44e-1510
visual cortex1.44e-1510
neocortex1.44e-1510
neural tube4.82e-1552
neural rod4.82e-1552
future spinal cord4.82e-1552
neural keel4.82e-1552
central nervous system2.46e-1473
regional part of nervous system2.62e-1454
nervous system8.38e-1475
neurectoderm1.33e-1264
neural plate1.33e-1264
presumptive neural plate1.33e-1264
brain grey matter3.13e-1229
regional part of telencephalon3.13e-1229
telencephalon3.13e-1229
regional part of forebrain1.79e-1139
forebrain1.79e-1139
future forebrain1.79e-1139
anterior neural tube4.24e-1140
regional part of cerebral cortex5.89e-1117
regional part of brain1.09e-1046
cerebral cortex1.73e-1021
cerebral hemisphere1.73e-1021
pallium1.73e-1021
ecto-epithelium1.94e-1073
brain2.22e-1047
future brain2.22e-1047
ectoderm-derived structure1.01e-0995
ectoderm1.01e-0995
presumptive ectoderm1.01e-0995
pre-chordal neural plate1.99e-0849
regional part of spinal cord4.58e-085
gray matter of spinal cord4.58e-085
ventral horn of spinal cord1.12e-073
structure with developmental contribution from neural crest2.77e-0792
tube2.91e-07114
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