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FFCP PHASE1:Mm9::chr3:133899295..133899337,+: Difference between revisions

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{{FFCP|EntrezGene=319478|HGNC=|UniProt=Q6NXI8|association_with_transcript=-121bp_to_NM_001004367,uc008rkv.1_5end|description=CAGE_peak_2_at_Cxxc4_5end|id=chr3:133899295..133899337,+|ontology_enrichment_celltype=CL:0000117!1.34e-09!23;CL:0000337!1.34e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.23e-12,23;CL:0000337,1.23e-12,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.34e-20!71;UBERON:0003075!1.34e-20!71;UBERON:0007284!1.34e-20!71;UBERON:0004121!3.39e-20!102;UBERON:0000924!3.39e-20!102;UBERON:0006601!3.39e-20!102;UBERON:0000033!4.82e-19!63;UBERON:0001049!4.78e-17!52;UBERON:0005068!4.78e-17!52;UBERON:0006241!4.78e-17!52;UBERON:0007135!4.78e-17!52;UBERON:0002616!5.05e-16!49;UBERON:0000955!6.40e-16!50;UBERON:0006238!6.40e-16!50;UBERON:0003056!1.36e-15!49;UBERON:0001017!3.14e-15!73;UBERON:0005743!3.14e-15!73;UBERON:0000073!2.11e-14!75;UBERON:0001016!2.11e-14!75;UBERON:0003080!6.11e-12!40;UBERON:0002780!2.61e-11!39;UBERON:0001890!2.61e-11!39;UBERON:0006240!2.61e-11!39;UBERON:0007811!2.06e-09!86;UBERON:0000153!2.97e-09!94;UBERON:0000468!3.96e-09!333;UBERON:0002020!1.50e-08!34;UBERON:0000922!1.18e-07!328;UBERON:0002791!9.11e-07!29;UBERON:0003528!9.11e-07!29;UBERON:0001893!9.11e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.51e-24,64;UBERON:0003075,2.51e-24,64;UBERON:0007284,2.51e-24,64;UBERON:0010371,9.67e-24,73;UBERON:0000073,3.14e-23,54;UBERON:0001049,8.67e-22,52;UBERON:0005068,8.67e-22,52;UBERON:0006241,8.67e-22,52;UBERON:0007135,8.67e-22,52;UBERON:0004121,4.98e-20,95;UBERON:0000924,4.98e-20,95;UBERON:0006601,4.98e-20,95;UBERON:0003056,7.57e-20,49;UBERON:0010314,4.25e-19,92;UBERON:0002616,3.19e-18,46;UBERON:0000955,1.66e-17,47;UBERON:0006238,1.66e-17,47;UBERON:0001017,1.07e-16,73;UBERON:0001016,9.62e-16,75;UBERON:0003080,2.11e-15,40;UBERON:0002780,1.45e-14,39;UBERON:0001890,1.45e-14,39;UBERON:0006240,1.45e-14,39;UBERON:0002020,6.58e-11,34;UBERON:0003528,1.51e-08,29;UBERON:0002791,1.51e-08,29;UBERON:0001893,1.51e-08,29;UBERON:0001894,8.44e-08,10;UBERON:0006222,8.44e-08,10;UBERON:0003076,3.75e-07,12;UBERON:0003057,3.75e-07,12|phase1_expression=0.480446541314382,0,0,0,1.00179145989269,1.51091344720701,0,0,0.140788722151667,0,0,0.0797721589953364,0.171200729931206,0,0,0,0,0,0,0,0.850432901510698,0,0,0.319984845586813,0.22940928106717,0,0,0,0.570070258369122,1.00812051903972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0.436050312760893,0,0.58328969722285,0.55994568650145,0,0,0,0,0,0,0,4.65327859977075,2.11596391708813,2.53532561402472,0.677689064138264,0,0,0,0,0.299600110518405,0.384218305321555,1.34796496001021,1.08004750665353,1.68259969081106,1.71390590642282,1.10434270475807,2.57230678351403,3.06705507258356,0,2.20231761998777,3.57524546638526,4.6081959976873,5.67111037239834,6.58711033937349,5.73004707612436,1.3959149950069,2.25105044012672,3.20876320331301,2.65165726926301,3.27454865837937,3.72798891650601,0.075726193333184,0.0755715601067855,3.18850937571846,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.34255163915718,0.517875767294343,1.03909497345377,0.346970653532272,0.608930956624282,2.53677046981664,1.20578112442098,1.99900802130698,0.628332956648377,0,0.578397427679647,0,0,0.220841518460394,0,0,5.85561594023094,4.81727425670947,0,0,0,0,5.24267237916879,2.28750301409313,1.38219787324151,2.78118912307642,2.30143911597297,3.32460871295296,2.75810147215188,1.83310854930569,0.248813941220186,0,3.36706969418358,1.56144531555244,0.459804208866946,1.62055916824814,3.0140963567143,2.99360596265843,4.48398020996974,3.09215691047105,4.9153640440413,1.29340795759705,1.70195472151037,0.879755620819744,0.657587197282725,0.556094498451196,0,0.205782136407943,0.995171334092466,0,0,0,1.44988040774851,2.11073453982987,0.900310307305074,1.42046841351126,1.96764231747404,2.1597395804233,1.62773761325285,0.536546802799238,1.5179494507732,0.987359099480883,0.492502392237286,0.810688095458557,0.584799949701329,0.658650345873152,0.536825675041487,2.52347938276953,1.02904612379284,0.330418782983798,0.264450566663544,2.34617075588757,1.16118335930219,0.257734922644187,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0.754005626400808,0.795825888164603,0,0,0.432276099749388,0.199141273254367,1.70701110857774,2.85621281524322,1.1270773567308,1.62921062276251,0.581857461502877,0.49095073923223,0,0.147610147979602,0.156998727841375,0,0,0.500535317148282,0.393117990226406,0,0,0.72353147925725,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0.947457058852424,0.651859905768103,0.509235257325564,0.938760993154008,0.167506257441816,0.476087281772027,0.390267295715598,0.315270288212382,0,0.159454768657487,0.327726629431476,0,0.433947175744535,0,0,4.42587845717133,4.41498794087572,3.37156238974363,3.5163505977661,0.163934945376675,0,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0,0.566153061577665,0,0.584511715822624,0.395287777946524,0.642642632843614,0.709700426041343,0.890328018336276,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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=319478
|HGNC=
|TSSclassifier=NA
|UniProt=Q6NXI8
|association_with_transcript=-121bp_to_NM_001004367,uc008rkv.1_5end
|cluster_id=chr3:133899295..133899337,+
|description=CAGE_peak_2_at_Cxxc4_5end
|id=chr3:133899295..133899337,+
|ontology_enrichment_celltype=CL:0000117!1.34e-09!23;CL:0000337!1.34e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.23e-12,23;CL:0000337,1.23e-12,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.34e-20!71;UBERON:0003075!1.34e-20!71;UBERON:0007284!1.34e-20!71;UBERON:0004121!3.39e-20!102;UBERON:0000924!3.39e-20!102;UBERON:0006601!3.39e-20!102;UBERON:0000033!4.82e-19!63;UBERON:0001049!4.78e-17!52;UBERON:0005068!4.78e-17!52;UBERON:0006241!4.78e-17!52;UBERON:0007135!4.78e-17!52;UBERON:0002616!5.05e-16!49;UBERON:0000955!6.40e-16!50;UBERON:0006238!6.40e-16!50;UBERON:0003056!1.36e-15!49;UBERON:0001017!3.14e-15!73;UBERON:0005743!3.14e-15!73;UBERON:0000073!2.11e-14!75;UBERON:0001016!2.11e-14!75;UBERON:0003080!6.11e-12!40;UBERON:0002780!2.61e-11!39;UBERON:0001890!2.61e-11!39;UBERON:0006240!2.61e-11!39;UBERON:0007811!2.06e-09!86;UBERON:0000153!2.97e-09!94;UBERON:0000468!3.96e-09!333;UBERON:0002020!1.50e-08!34;UBERON:0000922!1.18e-07!328;UBERON:0002791!9.11e-07!29;UBERON:0003528!9.11e-07!29;UBERON:0001893!9.11e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.51e-24,64;UBERON:0003075,2.51e-24,64;UBERON:0007284,2.51e-24,64;UBERON:0010371,9.67e-24,73;UBERON:0000073,3.14e-23,54;UBERON:0001049,8.67e-22,52;UBERON:0005068,8.67e-22,52;UBERON:0006241,8.67e-22,52;UBERON:0007135,8.67e-22,52;UBERON:0004121,4.98e-20,95;UBERON:0000924,4.98e-20,95;UBERON:0006601,4.98e-20,95;UBERON:0003056,7.57e-20,49;UBERON:0010314,4.25e-19,92;UBERON:0002616,3.19e-18,46;UBERON:0000955,1.66e-17,47;UBERON:0006238,1.66e-17,47;UBERON:0001017,1.07e-16,73;UBERON:0001016,9.62e-16,75;UBERON:0003080,2.11e-15,40;UBERON:0002780,1.45e-14,39;UBERON:0001890,1.45e-14,39;UBERON:0006240,1.45e-14,39;UBERON:0002020,6.58e-11,34;UBERON:0003528,1.51e-08,29;UBERON:0002791,1.51e-08,29;UBERON:0001893,1.51e-08,29;UBERON:0001894,8.44e-08,10;UBERON:0006222,8.44e-08,10;UBERON:0003076,3.75e-07,12;UBERON:0003057,3.75e-07,12
|phase1_expression=0.480446541314382,0,0,0,1.00179145989269,1.51091344720701,0,0,0.140788722151667,0,0,0.0797721589953364,0.171200729931206,0,0,0,0,0,0,0,0.850432901510698,0,0,0.319984845586813,0.22940928106717,0,0,0,0.570070258369122,1.00812051903972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0.436050312760893,0,0.58328969722285,0.55994568650145,0,0,0,0,0,0,0,4.65327859977075,2.11596391708813,2.53532561402472,0.677689064138264,0,0,0,0,0.299600110518405,0.384218305321555,1.34796496001021,1.08004750665353,1.68259969081106,1.71390590642282,1.10434270475807,2.57230678351403,3.06705507258356,0,2.20231761998777,3.57524546638526,4.6081959976873,5.67111037239834,6.58711033937349,5.73004707612436,1.3959149950069,2.25105044012672,3.20876320331301,2.65165726926301,3.27454865837937,3.72798891650601,0.075726193333184,0.0755715601067855,3.18850937571846,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.34255163915718,0.517875767294343,1.03909497345377,0.346970653532272,0.608930956624282,2.53677046981664,1.20578112442098,1.99900802130698,0.628332956648377,0,0.578397427679647,0,0,0.220841518460394,0,0,5.85561594023094,4.81727425670947,0,0,0,0,5.24267237916879,2.28750301409313,1.38219787324151,2.78118912307642,2.30143911597297,3.32460871295296,2.75810147215188,1.83310854930569,0.248813941220186,0,3.36706969418358,1.56144531555244,0.459804208866946,1.62055916824814,3.0140963567143,2.99360596265843,4.48398020996974,3.09215691047105,4.9153640440413,1.29340795759705,1.70195472151037,0.879755620819744,0.657587197282725,0.556094498451196,0,0.205782136407943,0.995171334092466,0,0,0,1.44988040774851,2.11073453982987,0.900310307305074,1.42046841351126,1.96764231747404,2.1597395804233,1.62773761325285,0.536546802799238,1.5179494507732,0.987359099480883,0.492502392237286,0.810688095458557,0.584799949701329,0.658650345873152,0.536825675041487,2.52347938276953,1.02904612379284,0.330418782983798,0.264450566663544,2.34617075588757,1.16118335930219,0.257734922644187,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0.754005626400808,0.795825888164603,0,0,0.432276099749388,0.199141273254367,1.70701110857774,2.85621281524322,1.1270773567308,1.62921062276251,0.581857461502877,0.49095073923223,0,0.147610147979602,0.156998727841375,0,0,0.500535317148282,0.393117990226406,0,0,0.72353147925725,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0.947457058852424,0.651859905768103,0.509235257325564,0.938760993154008,0.167506257441816,0.476087281772027,0.390267295715598,0.315270288212382,0,0.159454768657487,0.327726629431476,0,0.433947175744535,0,0,4.42587845717133,4.41498794087572,3.37156238974363,3.5163505977661,0.163934945376675,0,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0,0.566153061577665,0,0.584511715822624,0.395287777946524,0.642642632843614,0.709700426041343,0.890328018336276,0.162886959353576,0.494910368917606,1.32745138339963,2.18502572539483,1.51161778482376,2.45186603682668,3.54362271456927,1.84461088766356,1.03371317267288,2.18120237686503,1.78248689192361,2.52829406348653,1.05418608574999,3.09406629744561,5.10659408630682,2.52085531643834,3.62204314591713,3.42939256050548,3.54680467284547,2.85390108163313,2.30368628842969,1.2178597964584,0,0.21183207086382,2.8668691747145,1.97863503529776,0.484393280087717,0.784068024066026,0.596861720015682,2.1338316966858,0,4.07935664423121,0,0.619160603889667,0.370389054739423,0.376736914009382,0,0,0,0,0,1.90934123603023,2.68885594543965,1.01659733563424,2.05210147561422,1.67270636811575,0,0.404593039154462,0.495920734352016,0.523511883968059,0.777689839750757,1.24267862617385,0,1.79419855252775,1.15820943319968,2.13896307178452,0.516639293910924,2.02747350588934,2.58185925020659,1.3020438484395,0.943734099831398,0.241584120826006,0.288030006257865,0,0.405450430580328,1.43795340030758,0.909445760844565,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0,0.15241361331,0.100826185136841,0,0,0.116876902181569,0.453460767230423,0.221985953374065,0.0897138566094757,0,0,0.375364950902364,0,0,0.501572104035363,1.6942555278512,1.84130094602871,0.572895513439397,1.20297227640581,2.05524755931193,1.5107877947794,1.35004500046361,2.70192721934532,0,4.14208249401456,3.00983307994112,1.99512436700516,1.87806966329548,2.18796045361465,1.25767897576789,1.2869045591501,1.11123363900808,1.23621034343337,0.64183841918363,1.76888048234658,1.77435509923168,1.13175804831646,1.49826411951812,1.08842759088278,1.20614484806788,0,0.579421629724277,1.54327376370964,0,1.17759136107518,1.71434626192708,0.354951612318675,0.476872379894642,0.872078499793971,0.658765662907314,0.676916863133412,1.09756783723664,0.789209134313529,1.35804113845862,2.24456908663095,0.949080144993393,0.886540341380071,0,0.77468420592983,1.73615949883027,0.499621155875892,0.467863216890817,1.28922632428979,0.191288332068843,0.441182838239031,0.231867835620421
|short_description=p2@Cxxc4
}}

Latest revision as of 15:39, 1 October 2015

Short description:p2@Cxxc4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cxxc4_5end
Coexpression cluster:NA
Association with transcript: -121bp_to_NM_001004367, uc008rkv.1_5end
EntrezGene:Cxxc4
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p2@Cxxc4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.65
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.07
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.67
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.59
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.73
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.86
cerebellum, neonate N30.CNhs11135.1395-42I24.82
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.24
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D52.78
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D43.01
eyeball, neonate N00.CNhs11207.633-15C62.99
eyeball, neonate N01.CNhs11140.1532-43E74.48
eyeball, neonate N02.CNhs11205.1551-44G83.09
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C62.16
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F82.86
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H24.41
medulla oblongata, adult.CNhs10477.17-12C23.37
medulla oblongata, neonate N30.CNhs11200.1396-42A33.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C73.62
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E32.69
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B72.58
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I83.01
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.23e-1223
neuroblast (sensu Vertebrata)1.23e-1223

Uber anatomy
Ontology termp-valuen
neurectoderm2.51e-2464
neural plate2.51e-2464
presumptive neural plate2.51e-2464
ecto-epithelium9.67e-2473
regional part of nervous system3.14e-2354
neural tube8.67e-2252
neural rod8.67e-2252
future spinal cord8.67e-2252
neural keel8.67e-2252
ectoderm-derived structure4.98e-2095
ectoderm4.98e-2095
presumptive ectoderm4.98e-2095
pre-chordal neural plate7.57e-2049
structure with developmental contribution from neural crest4.25e-1992
regional part of brain3.19e-1846
brain1.66e-1747
future brain1.66e-1747
central nervous system1.07e-1673
nervous system9.62e-1675
anterior neural tube2.11e-1540
regional part of forebrain1.45e-1439
forebrain1.45e-1439
future forebrain1.45e-1439
gray matter6.58e-1134
brain grey matter1.51e-0829
regional part of telencephalon1.51e-0829
telencephalon1.51e-0829
diencephalon8.44e-0810
future diencephalon8.44e-0810
posterior neural tube3.75e-0712
chordal neural plate3.75e-0712
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