FFCP PHASE1:Hg19::chr8:18067644..18067662,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7645 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=1bp_to_ENST00000517574_5end | |||
|cluster_id=chr8:18067644..18067662,+ | |||
|description=CAGE_peak_2_at_NAT1_5end | |||
|id=chr8:18067644..18067662,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.89e-37!172;CL:0000566!1.89e-37!172;CL:0000988!1.25e-36!182;CL:0002032!3.55e-36!165;CL:0000837!3.55e-36!165;CL:0000738!2.82e-32!140;CL:0000763!1.91e-31!112;CL:0000049!1.91e-31!112;CL:0002031!3.38e-30!124;CL:0000134!1.93e-28!358;CL:0002087!1.39e-27!119;CL:0002009!2.39e-26!65;CL:0000839!3.40e-26!70;CL:0000557!3.44e-26!71;CL:0002320!7.42e-26!365;CL:0002194!4.61e-25!63;CL:0000576!4.61e-25!63;CL:0000040!4.61e-25!63;CL:0000559!4.61e-25!63;CL:0000766!7.51e-25!76;CL:0000219!4.74e-23!390;CL:0002057!5.28e-21!42;CL:0000048!5.41e-19!430;CL:0000860!1.35e-18!45;CL:0000723!1.20e-17!436;CL:0000034!3.89e-17!444;CL:0000063!8.65e-17!578;CL:0000003!5.88e-11!722;CL:0002371!3.42e-10!591;CL:0000144!2.28e-09!625;CL:0000012!1.31e-07!682;CL:0000548!1.74e-07!679;CL:0000004!1.74e-07!679;CL:0000255!1.74e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.64e-18;39!CL:0000234;5.64e-18;39!CL:0000860;6.55e-18;33!CL:0002057;6.55e-18;33!CL:0000576;4.00e-17;48!CL:0000766;4.49e-13;69!CL:0000763;1.49e-10;100!CL:0000738;8.10e-10;136!CL:0002087;1.40e-08;104!CL:0000988;4.97e-07;177!CL:0000990;6.58e-07;8!CL:0000451;9.54e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.96e-42,168;CL:0000988,2.05e-41,177;CL:0002032,7.72e-41,161;CL:0000837,7.72e-41,161;CL:0000763,9.29e-38,108;CL:0000049,9.29e-38,108;CL:0000738,1.45e-35,136;CL:0002031,2.40e-33,120;CL:0000557,9.53e-32,67;CL:0002009,9.64e-32,61;CL:0000839,2.15e-31,66;CL:0002194,2.87e-30,59;CL:0000576,2.87e-30,59;CL:0000040,2.87e-30,59;CL:0000559,2.87e-30,59;CL:0002087,4.63e-30,115;CL:0000766,5.32e-30,72;CL:0000134,1.26e-29,354;CL:0002320,3.00e-27,361;CL:0000473,1.04e-26,48;CL:0000234,1.04e-26,48;CL:0000219,2.23e-24,386;CL:0000860,7.87e-23,42;CL:0002057,7.87e-23,42;CL:0000048,4.61e-19,427;CL:0000723,1.40e-17,433;CL:0000034,1.25e-16,441;CL:0000990,4.17e-07,8;CL:0000451,4.80e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;8.07e-17;42!CL:0000049;1.35e-10;108 | |||
|ontology_enrichment_disease=DOID:1240!1.41e-08!39;DOID:2531!3.08e-08!51;DOID:0060083!3.08e-08!51;DOID:8692!8.39e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.04e-07;39!DOID:8692;1.92e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.16e-09,39;DOID:2531,8.44e-09,51;DOID:0060083,8.44e-09,51;DOID:8692,1.12e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.04e-29!112;UBERON:0002390!2.03e-29!102;UBERON:0003061!2.03e-29!102;UBERON:0002384!2.26e-24!375;UBERON:0002371!6.07e-24!80;UBERON:0001474!2.72e-21!86;UBERON:0002405!2.00e-18!115;UBERON:0004765!5.21e-18!101;UBERON:0001434!5.21e-18!101;UBERON:0003081!1.58e-12!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.86e-34,98;UBERON:0003061,4.86e-34,98;UBERON:0002193,1.47e-33,108;UBERON:0002405,7.86e-29,93;UBERON:0002371,9.76e-29,76;UBERON:0002384,5.96e-26,371;UBERON:0001474,6.42e-25,82;UBERON:0004765,1.29e-21,90;UBERON:0001434,1.21e-18,100;UBERON:0003081,7.65e-15,203;UBERON:0000926,4.46e-08,315;UBERON:0004120,4.46e-08,315;UBERON:0006603,4.46e-08,315 | |||
|phase1_expression=3.99692434395225,1.71280419112787,4.22863212287913,4.00293193412522,1.78784437770915,3.48935409640147,2.53299878168311,3.15859936713415,0.783556884599516,4.66894479352867,2.09340350391728,0.655324116390517,0.263766978228454,0.495065411840187,0,1.34465029290355,1.20538905604795,1.46062018077475,0,0.123121058076788,0,0,0.572471974262113,0.136874425072884,0.502170558379211,3.20936304141395,2.46301768349837,2.67616656466509,0.786728553697808,2.68680578668049,2.63187409637329,1.83884244895785,0.6024118375565,0.369754010166788,3.17615522379237,0.284338464974843,2.93600439334847,2.76997704265939,2.4065333696417,4.12320654360118,2.68698569087909,5.18229865630367,6.69696475848885,6.97911546141911,3.40088349319928,4.36651310138069,5.11343881192506,4.93401465626191,6.19412741790207,6.61692502340946,6.66017836975662,13.4794871036494,5.17118521104928,7.74581620300591,13.5426486594342,4.51781614902251,5.45812300115692,11.4608977066993,4.59125838556354,9.9487998393589,10.2293940127847,4.61791820261403,4.78712778291916,3.83602275479425,7.2552309657146,5.10646702222026,12.4564449799115,8.29120595347253,8.86520961314342,13.4657083717172,5.44859552370032,16.2042159834528,21.5194423459801,4.01385043992689,3.61427309940574,3.56419697364239,3.70684482783434,2.25265339262259,0.803627933485401,3.42015292489498,3.9783335439818,2.92262646023414,0,3.82297027883492,4.44754626931777,3.84057200309856,4.00395987036012,4.59801951963587,3.30522436392431,2.86216126360609,1.70763890732835,2.34894875748376,0.764546456250458,0,1.68152568894461,3.95076127162616,0.393419540227666,0.786021525498329,1.02800749499755,3.17654341242288,1.30368906653436,0.946895611469467,0,5.79334375802903,3.82987679717288,2.65840673500345,1.89562704635511,2.0494611156108,2.21100890851793,3.78207180588455,2.76350017785848,4.05724320029073,1.63115219478266,0.802622484269139,1.04535523804977,3.28597093822942,2.68254345521345,2.06176467289578,2.02415753615602,2.54852331459277,1.95325036156926,0.950452044448374,3.312652619711,3.07167866770604,2.49861453104692,1.4206635122641,1.64225599384209,1.61285394579786,1.06976078313403,1.30341963494519,0,2.01210257911091,1.15076305659177,3.2529523714611,1.00267582127178,1.30361867064741,2.3858578411533,0.973269740605272,0.378139268656271,0.443458794925128,0.702678285545008,1.0478326039817,0,0,7.7891374477124,7.31344896656922,7.17972986801872,1.90792499444274,2.28797964312051,1.85728750664782,1.39133685156694,1.72046919021225,0.694281003215189,1.13061588384802,1.25849830862972,0.275118041940067,0.417989933073621,2.32575083252396,1.42306505074684,1.67360306382335,0.805658634218294,4.56163263431108,0.732186172644509,2.94130464276695,0,2.14319347881791,0.898117490504679,1.68917220724983,1.53316637465883,0.949265659568129,0.366403487860815,2.63560834872127,0,0,2.48485975847659,2.65924074495618,1.85372853138506,2.29469296599051,2.4826786753885,1.68203280042692,0,0.74000264525148,1.24484414159907,1.61652806483626,1.47115712802113,0,0.576175924479999,0,0.936480230490962,0.570471821544449,0.448346041655403,0.352303495931295,0.161872944368132,0.140450806702248,2.04154171254893,0.491337269247072,0.309977343527296,2.37600571456411,1.23633464639278,0.910161361938026,0.718618141816238,0.168336113954066,0.125118519871964,1.93944880838928,0.877955241761676,2.45190236639216,1.05166641234618,2.83580457900053,1.07633781413317,1.49490172172997,1.69545520927649,0.600182192168805,2.37020817248409,1.03056216018252,2.41951913231067,1.18143432568886,2.82567314967476,2.77677151668526,2.11714766877288,2.10139873864455,0.355009592516614,3.22406714328449,1.18692414617341,2.31913023795956,0.818238361772504,1.14721838155602,0.853815942907168,0.530119073285941,0.813357600086629,0.725627385107593,0.504641701751257,0,0,0.643240938192885,1.38134921352481,6.96551892047969,7.21879481669586,1.0647612003586,1.01150814046861,1.44606617930089,1.10293972732394,2.17879444092406,1.89816495288877,0.539325232640658,1.37355025587742,1.15424147083917,0.738155454624648,0,0.4115740113314,0,0,0,0.590789906681404,6.18048339180511,8.48620225947483,0.686271241194102,0.768251997860379,0,0.502644862058154,0.925884451585296,0,0,1.44331342025273,0.34779121492523,0.939269553886573,2.7429625074604,2.31492756288305,2.28304982681518,3.1608175918371,3.43394464837949,4.92434012174795,11.7002132569619,4.7561971932393,0.93733833986777,3.19166043577833,3.54437743105966,0.358234090811393,1.45316969256981,0.383382679165211,12.8092441852945,5.10680917276711,1.86595303986695,1.58531948758658,1.51490920111656,2.15892840593375,0.381988425558278,0,3.4214489204541,1.95372236136315,2.10240140490742,3.14409075893636,0.897048674762886,0,0.8800594298514,0.904902010304444,0,0.845302752556,2.12750493267896,1.04007436911366,0,0,0.799266537048298,1.28680194292333,1.08524321078289,1.64648067356154,0.977208552881205,1.06617584622764,0,15.0719688529793,11.3299349618038,7.09808237392605,7.29742683847143,5.52482800575339,8.43335757932127,1.4377491329495,1.14861935834114,0,1.73737568001095,2.054763225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| |||
|short_description=p2@NAT1 | |||
}} |
Latest revision as of 06:09, 17 September 2015
Short description: | p2@NAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NAT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENST00000517574_5end |
EntrezGene: | NAT1 |
HGNC: | 7645 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 6.96e-42 | 168 |
hematopoietic cell | 2.05e-41 | 177 |
hematopoietic oligopotent progenitor cell | 7.72e-41 | 161 |
hematopoietic multipotent progenitor cell | 7.72e-41 | 161 |
myeloid cell | 9.29e-38 | 108 |
common myeloid progenitor | 9.29e-38 | 108 |
leukocyte | 1.45e-35 | 136 |
hematopoietic lineage restricted progenitor cell | 2.40e-33 | 120 |
granulocyte monocyte progenitor cell | 9.53e-32 | 67 |
macrophage dendritic cell progenitor | 9.64e-32 | 61 |
myeloid lineage restricted progenitor cell | 2.15e-31 | 66 |
monopoietic cell | 2.87e-30 | 59 |
monocyte | 2.87e-30 | 59 |
monoblast | 2.87e-30 | 59 |
promonocyte | 2.87e-30 | 59 |
nongranular leukocyte | 4.63e-30 | 115 |
myeloid leukocyte | 5.32e-30 | 72 |
mesenchymal cell | 1.26e-29 | 354 |
connective tissue cell | 3.00e-27 | 361 |
defensive cell | 1.04e-26 | 48 |
phagocyte | 1.04e-26 | 48 |
motile cell | 2.23e-24 | 386 |
classical monocyte | 7.87e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.87e-23 | 42 |
multi fate stem cell | 4.61e-19 | 427 |
somatic stem cell | 1.40e-17 | 433 |
stem cell | 1.25e-16 | 441 |
conventional dendritic cell | 4.17e-07 | 8 |
dendritic cell | 4.80e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.86e-34 | 98 |
blood island | 4.86e-34 | 98 |
hemolymphoid system | 1.47e-33 | 108 |
immune system | 7.86e-29 | 93 |
bone marrow | 9.76e-29 | 76 |
connective tissue | 5.96e-26 | 371 |
bone element | 6.42e-25 | 82 |
skeletal element | 1.29e-21 | 90 |
skeletal system | 1.21e-18 | 100 |
lateral plate mesoderm | 7.65e-15 | 203 |
mesoderm | 4.46e-08 | 315 |
mesoderm-derived structure | 4.46e-08 | 315 |
presumptive mesoderm | 4.46e-08 | 315 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.16e-09 | 39 |
hematologic cancer | 8.44e-09 | 51 |
immune system cancer | 8.44e-09 | 51 |
myeloid leukemia | 1.12e-07 | 31 |