FFCP PHASE1:Mm9::chr10:84849558..84849591,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:84849558..84849591,+
|short_description=p1@Btbd11
|description=CAGE_peak_1_at_Btbd11_5end
|association_with_transcript=0bp_to_ENSMUST00000020231,ENSMUST00...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=74007 | |EntrezGene=74007 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9QMN2,Q6GQW0,B2RUH2 | |UniProt=E9QMN2,Q6GQW0,B2RUH2 | ||
|association_with_transcript=0bp_to_ENSMUST00000020231,ENSMUST00000038045,ENSMUST00000105307,NM_028709,uc007glg.2_5end | |||
|cluster_id=chr10:84849558..84849591,+ | |||
|description=CAGE_peak_1_at_Btbd11_5end | |||
|id=chr10:84849558..84849591,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.36e-13!23;CL:0000337!4.36e-13!23;CL:0000540!2.05e-08!33;CL:0000047!2.05e-08!33;CL:0000031!2.05e-08!33;CL:0000404!2.05e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.65e-14,23;CL:0000337,3.65e-14,23;CL:0000540,6.47e-08,33;CL:0000047,6.47e-08,33;CL:0000031,6.47e-08,33;CL:0000404,6.47e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.65e-21!94;UBERON:0007811!1.45e-18!86;UBERON:0001049!3.05e-16!52;UBERON:0005068!3.05e-16!52;UBERON:0006241!3.05e-16!52;UBERON:0007135!3.05e-16!52;UBERON:0004121!1.32e-14!102;UBERON:0000924!1.32e-14!102;UBERON:0006601!1.32e-14!102;UBERON:0002616!1.48e-14!49;UBERON:0001017!3.57e-14!73;UBERON:0005743!3.57e-14!73;UBERON:0000955!8.01e-14!50;UBERON:0006238!8.01e-14!50;UBERON:0000033!1.31e-13!63;UBERON:0002346!2.80e-13!71;UBERON:0003075!2.80e-13!71;UBERON:0007284!2.80e-13!71;UBERON:0000073!2.82e-13!75;UBERON:0001016!2.82e-13!75;UBERON:0002020!5.15e-13!34;UBERON:0003080!5.11e-12!40;UBERON:0003056!1.02e-11!49;UBERON:0002780!2.15e-11!39;UBERON:0001890!2.15e-11!39;UBERON:0006240!2.15e-11!39;UBERON:0000064!1.42e-10!99;UBERON:0002791!5.65e-10!29;UBERON:0003528!5.65e-10!29;UBERON:0001893!5.65e-10!29;UBERON:0000475!3.69e-09!200;UBERON:0000956!4.79e-07!21;UBERON:0001869!4.79e-07!21;UBERON:0000203!4.79e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.72e-18,54;UBERON:0010371,8.79e-18,73;UBERON:0001049,1.74e-16,52;UBERON:0005068,1.74e-16,52;UBERON:0006241,1.74e-16,52;UBERON:0007135,1.74e-16,52;UBERON:0002346,5.57e-15,64;UBERON:0003075,5.57e-15,64;UBERON:0007284,5.57e-15,64;UBERON:0004121,6.76e-15,95;UBERON:0000924,6.76e-15,95;UBERON:0006601,6.76e-15,95;UBERON:0001017,1.24e-13,73;UBERON:0002020,2.34e-13,34;UBERON:0002616,1.24e-12,46;UBERON:0001016,1.40e-12,75;UBERON:0003080,5.26e-12,40;UBERON:0000955,5.86e-12,47;UBERON:0006238,5.86e-12,47;UBERON:0003056,9.03e-12,49;UBERON:0002780,2.43e-11,39;UBERON:0001890,2.43e-11,39;UBERON:0006240,2.43e-11,39;UBERON:0003528,4.33e-10,29;UBERON:0002791,4.33e-10,29;UBERON:0001893,4.33e-10,29;UBERON:0000153,9.21e-08,43;UBERON:0000072,1.43e-07,27;UBERON:0000956,6.23e-07,21;UBERON:0001869,6.23e-07,21;UBERON:0000203,6.23e-07,21 | |||
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| ||
|short_description=p1@Btbd11 | |||
}} | }} |
Latest revision as of 12:21, 26 September 2015
Short description: | p1@Btbd11 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Btbd11_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000020231, ENSMUST00000038045, ENSMUST00000105307, NM_028709, uc007glg.2_5end |
EntrezGene: | Btbd11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.65e-14 | 23 |
neuroblast (sensu Vertebrata) | 3.65e-14 | 23 |
neuron | 6.47e-08 | 33 |
neuronal stem cell | 6.47e-08 | 33 |
neuroblast | 6.47e-08 | 33 |
electrically signaling cell | 6.47e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 4.72e-18 | 54 |
ecto-epithelium | 8.79e-18 | 73 |
neural tube | 1.74e-16 | 52 |
neural rod | 1.74e-16 | 52 |
future spinal cord | 1.74e-16 | 52 |
neural keel | 1.74e-16 | 52 |
neurectoderm | 5.57e-15 | 64 |
neural plate | 5.57e-15 | 64 |
presumptive neural plate | 5.57e-15 | 64 |
ectoderm-derived structure | 6.76e-15 | 95 |
ectoderm | 6.76e-15 | 95 |
presumptive ectoderm | 6.76e-15 | 95 |
central nervous system | 1.24e-13 | 73 |
gray matter | 2.34e-13 | 34 |
regional part of brain | 1.24e-12 | 46 |
nervous system | 1.40e-12 | 75 |
anterior neural tube | 5.26e-12 | 40 |
brain | 5.86e-12 | 47 |
future brain | 5.86e-12 | 47 |
pre-chordal neural plate | 9.03e-12 | 49 |
regional part of forebrain | 2.43e-11 | 39 |
forebrain | 2.43e-11 | 39 |
future forebrain | 2.43e-11 | 39 |
brain grey matter | 4.33e-10 | 29 |
regional part of telencephalon | 4.33e-10 | 29 |
telencephalon | 4.33e-10 | 29 |
anterior region of body | 9.21e-08 | 43 |
segment of respiratory tract | 1.43e-07 | 27 |
cerebral cortex | 6.23e-07 | 21 |
cerebral hemisphere | 6.23e-07 | 21 |
pallium | 6.23e-07 | 21 |