FFCP PHASE1:Mm9::chr5:37438641..37438657,+: Difference between revisions
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{{FFCP|EntrezGene=76071|HGNC=|MCL_coexpression_id=122|UniProt=|association_with_transcript=-13bp_to_ENSMUST00000147014,uc008xfg.1,uc008xfh.1_5end|description=CAGE_peak_6_at_Jakmip1_5end|id=chr5:37438641..37438657,+|ontology_enrichment_celltype=CL:0000838!1.98e-12!12;CL:0000988!2.36e-11!32;CL:0002032!2.36e-11!32;CL:0000037!2.36e-11!32;CL:0000566!2.36e-11!32;CL:0000837!2.36e-11!32;CL:0000084!2.41e-11!11;CL:0000827!2.41e-11!11;CL:0000542!3.84e-11!13;CL:0000051!3.84e-11!13;CL:0002031!8.26e-10!25;CL:0000791!2.08e-09!9;CL:0000789!2.08e-09!9;CL:0002420!2.08e-09!9;CL:0002419!2.08e-09!9;CL:0000790!2.08e-09!9;CL:0000624!2.31e-08!8;CL:0000738!1.46e-07!17;CL:0002087!1.46e-07!17|ontology_enrichment_celltype_v019_2=CL:0000838,5.33e-20,12;CL:0000542,2.67e-18,13;CL:0000051,2.67e-18,13;CL:0002031,9.72e-18,25;CL:0000084,1.36e-17,11;CL:0000827,1.36e-17,11;CL:0000738,1.66e-13,17;CL:0002087,1.66e-13,17;CL:0000791,2.68e-13,9;CL:0000789,2.68e-13,9;CL:0002420,2.68e-13,9;CL:0002419,2.68e-13,9;CL:0000790,2.68e-13,9;CL:0000988,3.86e-13,32;CL:0002032,3.86e-13,32;CL:0000037,3.86e-13,32;CL:0000837,3.86e-13,32;CL:0000624,4.70e-11,8;CL:0002320,3.58e-08,46;CL:0000134,3.58e-08,46;CL:0000553,1.76e-07,6;CL:0000556,1.76e-07,6;CL:0000893,9.21e-07,6;CL:0002489,9.21e-07,6;CL:0000898,9.21e-07,6;CL:0000809,9.21e-07,6;CL:0000810,9.21e-07,6;CL:0000895,9.21e-07,6;CL:0000808,9.21e-07,6;CL:0000894,9.21e-07,6;CL:0000806,9.21e-07,6;CL:0000807,9.21e-07,6;CL:0000805,9.21e-07,6;CL:0002425,9.21e-07,6;CL:0002436,9.21e-07,6;CL:0002427,9.21e-07,6;CL:0002428,9.21e-07,6;CL:0002429,9.21e-07,6;CL:0002433,9.21e-07,6;CL:0002431,9.21e-07,6;CL:0002432,9.21e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.16e-20!48;UBERON:0004177!3.26e-19!29;UBERON:0002390!8.07e-18!45;UBERON:0003061!8.07e-18!45;UBERON:0003408!1.12e-15!24;UBERON:0002405!1.56e-15!70;UBERON:0002370!5.08e-15!23;UBERON:0000974!5.08e-15!23;UBERON:0004807!5.08e-15!23;UBERON:0005058!5.08e-15!23;UBERON:0003351!5.08e-15!23;UBERON:0009113!5.08e-15!23;UBERON:0003295!5.08e-15!23;UBERON:0009722!5.08e-15!23;UBERON:0005562!5.08e-15!23;UBERON:0007690!5.08e-15!23;UBERON:0006562!4.37e-14!24;UBERON:0001557!4.37e-14!24;UBERON:0001042!4.37e-14!24;UBERON:0008814!4.37e-14!24;UBERON:0009145!4.37e-14!24;UBERON:0005057!1.45e-12!51;UBERON:0000072!1.02e-11!27;UBERON:0001007!1.89e-09!128;UBERON:0001555!1.89e-09!128;UBERON:0007026!1.89e-09!128;UBERON:0004119!4.66e-09!130;UBERON:0000925!4.66e-09!130;UBERON:0006595!4.66e-09!130;UBERON:0001041!5.95e-09!92;UBERON:0001004!7.61e-09!42;UBERON:0004921!1.46e-08!126;UBERON:0004185!1.46e-08!126;UBERON:0003081!1.54e-08!88;UBERON:0000063!1.72e-08!35;UBERON:0000077!2.21e-08!97;UBERON:0000065!2.51e-08!41;UBERON:0003929!6.95e-08!55|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.70e-25,48;UBERON:0002405,5.70e-25,48;UBERON:0004177,1.10e-23,29;UBERON:0005057,1.10e-23,29;UBERON:0002390,2.88e-22,45;UBERON:0003061,2.88e-22,45;UBERON:0002370,3.04e-21,23;UBERON:0000974,3.04e-21,23;UBERON:0004807,3.04e-21,23;UBERON:0005058,3.04e-21,23;UBERON:0003351,3.04e-21,23;UBERON:0009113,3.04e-21,23;UBERON:0003295,3.04e-21,23;UBERON:0009722,3.04e-21,23;UBERON:0005562,3.04e-21,23;UBERON:0007690,3.04e-21,23;UBERON:0006562,3.26e-20,24;UBERON:0003408,3.26e-20,24;UBERON:0001557,3.26e-20,24;UBERON:0001042,3.26e-20,24;UBERON:0008814,3.26e-20,24;UBERON:0009145,3.26e-20,24;UBERON:0000077,6.71e-19,35;UBERON:0000072,1.39e-17,27;UBERON:0007811,2.49e-12,36;UBERON:0003081,3.21e-11,87;UBERON:0000065,2.04e-10,41;UBERON:0001004,4.34e-10,42;UBERON:0000153,8.90e-10,43;UBERON:0002384,3.58e-08,46;UBERON:0003929,5.43e-08,55;UBERON:0002368,4.86e-07,60;UBERON:0001041,7.75e-07,80|phase1_expression=0,0,0,0,0,0.16787927191189,0,7.36002943616985,0.84473233291,0.234064526321993,1.19852577757853,1.03703806693937,9.24483941628511,8.56719943706175,0.999329285446988,1.82227740650843,0,9.93705820878449,11.9289557236993,8.91218268775863,0.255129870453209,4.66667470644161,5.22399578277871,0.47997726838022,1.14704640533585,0,0,0,0,0,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.89247812106003,8.70434570413613,8.4023449785616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.68510327831436,7.50919862576798,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,0,0,1.54589062922275,1.93950101254089,0,0,0,0.766371165625774,0.359445373517761,0.599902730993408,0.762421362438388,0,0,0.125654352112864,0,0,0,0,0,0.870848794270651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0.219550115291051,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0.295220295959204,0,0,0.296452627087149,0,0,0,0,0,0.763877555344259,0.863088412352432,0.648540907100142,0,1.43768206527355,0.372140947668503,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0.157635144106191,0,0.318909537314974,0.163863314715738,0,0,0,0,0,0.827810238914197,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0.632073515871632,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0.291480836629851,0,1.53783792718067,0.206386867963223,0.185194527369712,0.941842285023455,3.41735569302563,2.74533807847827,1.86976272993241,1.81936888020755,1.10559979043539,0,0,0,0.216010681643603,0,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0,0,5.37218905067903,0.202725215290164,0.718976700153791,0.649604114888975,1.61124026100733,3.3775830312815,2.40390899039938,3.54454865218985,5.75508764704442,4.11516755936999,4.83965688656834,6.33476224808391,4.52195655709548,6.54510652216786,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.169229215783353,0,0.263069711437843,0,0,0,0.0985044823755635,0.409231043169689,0,0,0,0,0,0,0,0|short_description=p6@Jakmip1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76071 | |||
|HGNC= | |||
|MCL_coexpression_id=122 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-13bp_to_ENSMUST00000147014,uc008xfg.1,uc008xfh.1_5end | |||
|cluster_id=chr5:37438641..37438657,+ | |||
|description=CAGE_peak_6_at_Jakmip1_5end | |||
|id=chr5:37438641..37438657,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.98e-12!12;CL:0000988!2.36e-11!32;CL:0002032!2.36e-11!32;CL:0000037!2.36e-11!32;CL:0000566!2.36e-11!32;CL:0000837!2.36e-11!32;CL:0000084!2.41e-11!11;CL:0000827!2.41e-11!11;CL:0000542!3.84e-11!13;CL:0000051!3.84e-11!13;CL:0002031!8.26e-10!25;CL:0000791!2.08e-09!9;CL:0000789!2.08e-09!9;CL:0002420!2.08e-09!9;CL:0002419!2.08e-09!9;CL:0000790!2.08e-09!9;CL:0000624!2.31e-08!8;CL:0000738!1.46e-07!17;CL:0002087!1.46e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.33e-20,12;CL:0000542,2.67e-18,13;CL:0000051,2.67e-18,13;CL:0002031,9.72e-18,25;CL:0000084,1.36e-17,11;CL:0000827,1.36e-17,11;CL:0000738,1.66e-13,17;CL:0002087,1.66e-13,17;CL:0000791,2.68e-13,9;CL:0000789,2.68e-13,9;CL:0002420,2.68e-13,9;CL:0002419,2.68e-13,9;CL:0000790,2.68e-13,9;CL:0000988,3.86e-13,32;CL:0002032,3.86e-13,32;CL:0000037,3.86e-13,32;CL:0000837,3.86e-13,32;CL:0000624,4.70e-11,8;CL:0002320,3.58e-08,46;CL:0000134,3.58e-08,46;CL:0000553,1.76e-07,6;CL:0000556,1.76e-07,6;CL:0000893,9.21e-07,6;CL:0002489,9.21e-07,6;CL:0000898,9.21e-07,6;CL:0000809,9.21e-07,6;CL:0000810,9.21e-07,6;CL:0000895,9.21e-07,6;CL:0000808,9.21e-07,6;CL:0000894,9.21e-07,6;CL:0000806,9.21e-07,6;CL:0000807,9.21e-07,6;CL:0000805,9.21e-07,6;CL:0002425,9.21e-07,6;CL:0002436,9.21e-07,6;CL:0002427,9.21e-07,6;CL:0002428,9.21e-07,6;CL:0002429,9.21e-07,6;CL:0002433,9.21e-07,6;CL:0002431,9.21e-07,6;CL:0002432,9.21e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.16e-20!48;UBERON:0004177!3.26e-19!29;UBERON:0002390!8.07e-18!45;UBERON:0003061!8.07e-18!45;UBERON:0003408!1.12e-15!24;UBERON:0002405!1.56e-15!70;UBERON:0002370!5.08e-15!23;UBERON:0000974!5.08e-15!23;UBERON:0004807!5.08e-15!23;UBERON:0005058!5.08e-15!23;UBERON:0003351!5.08e-15!23;UBERON:0009113!5.08e-15!23;UBERON:0003295!5.08e-15!23;UBERON:0009722!5.08e-15!23;UBERON:0005562!5.08e-15!23;UBERON:0007690!5.08e-15!23;UBERON:0006562!4.37e-14!24;UBERON:0001557!4.37e-14!24;UBERON:0001042!4.37e-14!24;UBERON:0008814!4.37e-14!24;UBERON:0009145!4.37e-14!24;UBERON:0005057!1.45e-12!51;UBERON:0000072!1.02e-11!27;UBERON:0001007!1.89e-09!128;UBERON:0001555!1.89e-09!128;UBERON:0007026!1.89e-09!128;UBERON:0004119!4.66e-09!130;UBERON:0000925!4.66e-09!130;UBERON:0006595!4.66e-09!130;UBERON:0001041!5.95e-09!92;UBERON:0001004!7.61e-09!42;UBERON:0004921!1.46e-08!126;UBERON:0004185!1.46e-08!126;UBERON:0003081!1.54e-08!88;UBERON:0000063!1.72e-08!35;UBERON:0000077!2.21e-08!97;UBERON:0000065!2.51e-08!41;UBERON:0003929!6.95e-08!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.70e-25,48;UBERON:0002405,5.70e-25,48;UBERON:0004177,1.10e-23,29;UBERON:0005057,1.10e-23,29;UBERON:0002390,2.88e-22,45;UBERON:0003061,2.88e-22,45;UBERON:0002370,3.04e-21,23;UBERON:0000974,3.04e-21,23;UBERON:0004807,3.04e-21,23;UBERON:0005058,3.04e-21,23;UBERON:0003351,3.04e-21,23;UBERON:0009113,3.04e-21,23;UBERON:0003295,3.04e-21,23;UBERON:0009722,3.04e-21,23;UBERON:0005562,3.04e-21,23;UBERON:0007690,3.04e-21,23;UBERON:0006562,3.26e-20,24;UBERON:0003408,3.26e-20,24;UBERON:0001557,3.26e-20,24;UBERON:0001042,3.26e-20,24;UBERON:0008814,3.26e-20,24;UBERON:0009145,3.26e-20,24;UBERON:0000077,6.71e-19,35;UBERON:0000072,1.39e-17,27;UBERON:0007811,2.49e-12,36;UBERON:0003081,3.21e-11,87;UBERON:0000065,2.04e-10,41;UBERON:0001004,4.34e-10,42;UBERON:0000153,8.90e-10,43;UBERON:0002384,3.58e-08,46;UBERON:0003929,5.43e-08,55;UBERON:0002368,4.86e-07,60;UBERON:0001041,7.75e-07,80 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,7.36002943616985,0.84473233291,0.234064526321993,1.19852577757853,1.03703806693937,9.24483941628511,8.56719943706175,0.999329285446988,1.82227740650843,0,9.93705820878449,11.9289557236993,8.91218268775863,0.255129870453209,4.66667470644161,5.22399578277871,0.47997726838022,1.14704640533585,0,0,0,0,0,0.221730510655305,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.89247812106003,8.70434570413613,8.4023449785616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.68510327831436,7.50919862576798,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,0,0,1.54589062922275,1.93950101254089,0,0,0,0.766371165625774,0.359445373517761,0.599902730993408,0.762421362438388,0,0,0.125654352112864,0,0,0,0,0,0.870848794270651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0.219550115291051,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0.295220295959204,0,0,0.296452627087149,0,0,0,0,0,0.763877555344259,0.863088412352432,0.648540907100142,0,1.43768206527355,0.372140947668503,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0.157635144106191,0,0.318909537314974,0.163863314715738,0,0,0,0,0,0.827810238914197,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0.632073515871632,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0.291480836629851,0,1.53783792718067,0.206386867963223,0.185194527369712,0.941842285023455,3.41735569302563,2.74533807847827,1.86976272993241,1.81936888020755,1.10559979043539,0,0,0,0.216010681643603,0,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0,0,5.37218905067903,0.202725215290164,0.718976700153791,0.649604114888975,1.61124026100733,3.3775830312815,2.40390899039938,3.54454865218985,5.75508764704442,4.11516755936999,4.83965688656834,6.33476224808391,4.52195655709548,6.54510652216786,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.169229215783353,0,0.263069711437843,0,0,0,0.0985044823755635,0.409231043169689,0,0,0,0,0,0,0,0 | |||
|short_description=p6@Jakmip1 | |||
}} |
Latest revision as of 00:22, 26 September 2015
Short description: | p6@Jakmip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Jakmip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:122 |
Association with transcript: | -13bp_to_ENSMUST00000147014, uc008xfg.1, uc008xfh.1_5end |
EntrezGene: | Jakmip1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.70e-25 | 48 |
immune system | 5.70e-25 | 48 |
hemopoietic organ | 1.10e-23 | 29 |
immune organ | 1.10e-23 | 29 |
hematopoietic system | 2.88e-22 | 45 |
blood island | 2.88e-22 | 45 |
thymus | 3.04e-21 | 23 |
neck | 3.04e-21 | 23 |
respiratory system epithelium | 3.04e-21 | 23 |
hemolymphoid system gland | 3.04e-21 | 23 |
pharyngeal epithelium | 3.04e-21 | 23 |
thymic region | 3.04e-21 | 23 |
pharyngeal gland | 3.04e-21 | 23 |
entire pharyngeal arch endoderm | 3.04e-21 | 23 |
thymus primordium | 3.04e-21 | 23 |
early pharyngeal endoderm | 3.04e-21 | 23 |
pharynx | 3.26e-20 | 24 |
gland of gut | 3.26e-20 | 24 |
upper respiratory tract | 3.26e-20 | 24 |
chordate pharynx | 3.26e-20 | 24 |
pharyngeal arch system | 3.26e-20 | 24 |
pharyngeal region of foregut | 3.26e-20 | 24 |
mixed endoderm/mesoderm-derived structure | 6.71e-19 | 35 |
segment of respiratory tract | 1.39e-17 | 27 |
craniocervical region | 2.49e-12 | 36 |
lateral plate mesoderm | 3.21e-11 | 87 |
respiratory tract | 2.04e-10 | 41 |
respiratory system | 4.34e-10 | 42 |
anterior region of body | 8.90e-10 | 43 |
connective tissue | 3.58e-08 | 46 |
gut epithelium | 5.43e-08 | 55 |
endocrine gland | 4.86e-07 | 60 |
foregut | 7.75e-07 | 80 |