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FFCP PHASE1:Mm9::chr5:67137095..67137135,+: Difference between revisions

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{{FFCP|EntrezGene=77569|HGNC=|UniProt=D3Z589,D6RHT2|association_with_transcript=0bp_to_ENSMUST00000117601,ENSMUST00000130228_5end|description=CAGE_peak_1_at_Limch1_5end|id=chr5:67137095..67137135,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.89e-12!71;UBERON:0003075!2.89e-12!71;UBERON:0007284!2.89e-12!71;UBERON:0000468!5.09e-12!333;UBERON:0000033!4.43e-11!63;UBERON:0004111!5.44e-11!122;UBERON:0004121!1.93e-10!102;UBERON:0000924!1.93e-10!102;UBERON:0006601!1.93e-10!102;UBERON:0000955!6.33e-10!50;UBERON:0006238!6.33e-10!50;UBERON:0001049!9.98e-10!52;UBERON:0005068!9.98e-10!52;UBERON:0006241!9.98e-10!52;UBERON:0007135!9.98e-10!52;UBERON:0000025!1.29e-09!114;UBERON:0002616!2.00e-09!49;UBERON:0001017!1.38e-08!73;UBERON:0005743!1.38e-08!73;UBERON:0005157!1.93e-08!27;UBERON:0000073!7.96e-08!75;UBERON:0001016!7.96e-08!75;UBERON:0000922!1.70e-07!328;UBERON:0002048!1.93e-07!14;UBERON:0000117!1.93e-07!14;UBERON:0000171!1.93e-07!14;UBERON:0000170!1.93e-07!14;UBERON:0005597!1.93e-07!14;UBERON:0000118!1.93e-07!14;UBERON:0003056!1.95e-07!49;UBERON:0000479!4.62e-07!349;UBERON:0003080!5.70e-07!40;UBERON:0005153!7.37e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.19e-16,92;UBERON:0004111,9.63e-11,122;UBERON:0000073,2.92e-10,54;UBERON:0002346,4.22e-10,64;UBERON:0003075,4.22e-10,64;UBERON:0007284,4.22e-10,64;UBERON:0010371,8.81e-10,73;UBERON:0001049,1.27e-09,52;UBERON:0005068,1.27e-09,52;UBERON:0006241,1.27e-09,52;UBERON:0007135,1.27e-09,52;UBERON:0000025,2.23e-09,114;UBERON:0000955,1.11e-08,47;UBERON:0006238,1.11e-08,47;UBERON:0001017,1.68e-08,73;UBERON:0004121,2.20e-08,95;UBERON:0000924,2.20e-08,95;UBERON:0006601,2.20e-08,95;UBERON:0002616,3.36e-08,46;UBERON:0001016,1.21e-07,75;UBERON:0002048,1.83e-07,14;UBERON:0000117,1.83e-07,14;UBERON:0000171,1.83e-07,14;UBERON:0000170,1.83e-07,14;UBERON:0005597,1.83e-07,14;UBERON:0000118,1.83e-07,14;UBERON:0003056,1.84e-07,49;UBERON:0000479,2.27e-07,349;UBERON:0003080,5.41e-07,40;UBERON:0005153,7.00e-07,17|phase1_expression=18.4171174170513,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0,0,0,0,0,0.333109761815663,1.21485160433896,0,0.473193248037357,0,0,34.0173160604279,0,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0.61506478758457,0,2.59966457776147,3.65716219788683,2.6542016314108,0,0,0,0,0,0,0,0,0,0.782391344348039,22.8926414199469,4.61340983742391,9.13820525649132,3.77963338388479,5.75010257459886,0,0,0,2.31533492432352,3.72493471920384,3.09403255366465,6.27181028664753,11.6378015439847,15.2119536841483,0,0,0,0,0,3.59520132622086,8.83702102239575,26.7519199755872,24.1660629613726,25.2389953621658,20.2812198926701,21.4242484723065,10.1667363348412,7.66763768145891,11.0306254393203,34.1359231098105,36.2632040161933,42.3954031787232,7.64940468835124,8.59983849862651,5.73004707612436,32.3852278841602,38.2678574821542,34.5324039975591,34.1769159149455,32.1759998605973,21.4359362699096,0.757261933331841,1.5870027622425,47.8276406357768,0.860423876981386,0,0,0,0.448026887097336,16.2915527352832,0,0,0,30.1404918322096,0,0,0,0,0,0,8.5637909789295,2.58937883647172,52.1031908117535,19.4303565978072,27.7063585264048,26.9820131789588,29.8430828294193,43.1550555188037,47.250638339958,4.44950941921873,48.5853839250903,13.2691582792481,53.0595267827502,30.0344465106135,31.0320162006542,1.86391761218122,41.5748731756397,39.7948742945565,3.32094171771169,0,0,0,62.0133247135966,61.7625813805146,11.1832373380449,43.1084314076846,40.9144731728529,50.7002828725327,58.0823721782572,9.16554274652847,21.0247780331057,9.60346482047964,15.3622554797126,11.5807194236806,10.5754968039398,10.6236656585156,19.1395118651358,16.6689422920753,19.3451717630123,21.9262035469765,39.5816157230694,2.15567992932842,15.1284864134255,28.6800332387237,20.8235945806196,39.4827093900349,35.8699731517832,33.1309239616789,11.1459189418356,0,0,0,19.6769483908727,22.7490278181663,20.3470129450947,23.9112182941062,25.9728785906573,20.0547246753592,26.2763357567961,23.0715125203672,27.4398554562848,27.4814949355512,74.3678612278301,84.0683554990524,105.55639092109,113.507409605473,98.7759242076336,47.7358183240569,18.1112117787541,1.32167513193519,1.58670339998127,19.4092307987063,9.75394021813842,9.14958975386863,4.84040459096022,4.44756087689741,4.94586627892654,8.0669940462567,6.42325923423642,5.02670417600539,8.55512829776949,5.06906626509712,8.08937467788799,3.02593269824572,3.38540164532424,6.06937283049861,18.0512649923372,22.5415471346161,19.9578301288408,19.7831536910978,19.4276221096182,33.1359454531108,33.0646731474309,28.887765922813,28.8749363577013,1.77871576252289,3.50374722003798,2.75182593158484,0.449724224769707,2.43432145666204,2.17059443777175,2.5462585178142,5.17853047411459,4.05338066937588,2.74561413188081,7.18841032636773,6.69853705803306,5.92871578917665,1.26289438973556,3.04975602987251,2.8946611281802,145.770267041451,13.0749074121634,22.3262017725575,22.915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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=77569
|HGNC=
|TSSclassifier=NA
|UniProt=D3Z589,D6RHT2
|association_with_transcript=0bp_to_ENSMUST00000117601,ENSMUST00000130228_5end
|cluster_id=chr5:67137095..67137135,+
|description=CAGE_peak_1_at_Limch1_5end
|id=chr5:67137095..67137135,+
|ontology_enrichment_celltype=
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|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.19e-16,92;UBERON:0004111,9.63e-11,122;UBERON:0000073,2.92e-10,54;UBERON:0002346,4.22e-10,64;UBERON:0003075,4.22e-10,64;UBERON:0007284,4.22e-10,64;UBERON:0010371,8.81e-10,73;UBERON:0001049,1.27e-09,52;UBERON:0005068,1.27e-09,52;UBERON:0006241,1.27e-09,52;UBERON:0007135,1.27e-09,52;UBERON:0000025,2.23e-09,114;UBERON:0000955,1.11e-08,47;UBERON:0006238,1.11e-08,47;UBERON:0001017,1.68e-08,73;UBERON:0004121,2.20e-08,95;UBERON:0000924,2.20e-08,95;UBERON:0006601,2.20e-08,95;UBERON:0002616,3.36e-08,46;UBERON:0001016,1.21e-07,75;UBERON:0002048,1.83e-07,14;UBERON:0000117,1.83e-07,14;UBERON:0000171,1.83e-07,14;UBERON:0000170,1.83e-07,14;UBERON:0005597,1.83e-07,14;UBERON:0000118,1.83e-07,14;UBERON:0003056,1.84e-07,49;UBERON:0000479,2.27e-07,349;UBERON:0003080,5.41e-07,40;UBERON:0005153,7.00e-07,17
|phase1_expression=18.4171174170513,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0,0,0,0,0,0.333109761815663,1.21485160433896,0,0.473193248037357,0,0,34.0173160604279,0,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0.61506478758457,0,2.59966457776147,3.65716219788683,2.6542016314108,0,0,0,0,0,0,0,0,0,0.782391344348039,22.8926414199469,4.61340983742391,9.13820525649132,3.77963338388479,5.75010257459886,0,0,0,2.31533492432352,3.72493471920384,3.09403255366465,6.27181028664753,11.6378015439847,15.2119536841483,0,0,0,0,0,3.59520132622086,8.83702102239575,26.7519199755872,24.1660629613726,25.2389953621658,20.2812198926701,21.4242484723065,10.1667363348412,7.66763768145891,11.0306254393203,34.1359231098105,36.2632040161933,42.3954031787232,7.64940468835124,8.59983849862651,5.73004707612436,32.3852278841602,38.2678574821542,34.5324039975591,34.1769159149455,32.1759998605973,21.4359362699096,0.757261933331841,1.5870027622425,47.8276406357768,0.860423876981386,0,0,0,0.448026887097336,16.2915527352832,0,0,0,30.1404918322096,0,0,0,0,0,0,8.5637909789295,2.58937883647172,52.1031908117535,19.4303565978072,27.7063585264048,26.9820131789588,29.8430828294193,43.1550555188037,47.250638339958,4.44950941921873,48.5853839250903,13.2691582792481,53.0595267827502,30.0344465106135,31.0320162006542,1.86391761218122,41.5748731756397,39.7948742945565,3.32094171771169,0,0,0,62.0133247135966,61.7625813805146,11.1832373380449,43.1084314076846,40.9144731728529,50.7002828725327,58.0823721782572,9.16554274652847,21.0247780331057,9.60346482047964,15.3622554797126,11.5807194236806,10.5754968039398,10.6236656585156,19.1395118651358,16.6689422920753,19.3451717630123,21.9262035469765,39.5816157230694,2.15567992932842,15.1284864134255,28.6800332387237,20.8235945806196,39.4827093900349,35.8699731517832,33.1309239616789,11.1459189418356,0,0,0,19.6769483908727,22.7490278181663,20.3470129450947,23.9112182941062,25.9728785906573,20.0547246753592,26.2763357567961,23.0715125203672,27.4398554562848,27.4814949355512,74.3678612278301,84.0683554990524,105.55639092109,113.507409605473,98.7759242076336,47.7358183240569,18.1112117787541,1.32167513193519,1.58670339998127,19.4092307987063,9.75394021813842,9.14958975386863,4.84040459096022,4.44756087689741,4.94586627892654,8.0669940462567,6.42325923423642,5.02670417600539,8.55512829776949,5.06906626509712,8.08937467788799,3.02593269824572,3.38540164532424,6.06937283049861,18.0512649923372,22.5415471346161,19.9578301288408,19.7831536910978,19.4276221096182,33.1359454531108,33.0646731474309,28.887765922813,28.8749363577013,1.77871576252289,3.50374722003798,2.75182593158484,0.449724224769707,2.43432145666204,2.17059443777175,2.5462585178142,5.17853047411459,4.05338066937588,2.74561413188081,7.18841032636773,6.69853705803306,5.92871578917665,1.26289438973556,3.04975602987251,2.8946611281802,145.770267041451,13.0749074121634,22.3262017725575,22.9155865796504,26.5199980566007,39.1964642413849,78.7924451332705,104.201367956065,99.6254110751127,80.8346117218028,96.6295898064372,134.695644696337,120.188747378663,145.372303874419,0,0,3.44234991113325,6.34654516500885,73.3716196244209,73.9605742396802,0,54.0287784217358,13.566853434899,12.8844785617891,12.2791336707695,2.86762557543062,3.7875774594007,1.98153571552183,6.07216052512342,10.5212108848072,7.51046778098395,70.0480469799539,9.36804562374573,10.6839362200353,16.2886959353576,9.40329700943452,5.30980553359851,7.04063844849446,5.44182402536552,7.54420319023592,5.61073596473468,12.2974059177571,9.8202751403924,12.3601468022352,15.329387270543,9.48110273807448,9.48767477174989,9.28219889233682,41.5336319019621,16.7456817449118,9.44318391614108,16.7182887324642,19.6847659342924,23.0095774706671,24.517804069716,17.6589670486468,6.8054795338476,3.60114520468494,159.883088589847,13.8504452470843,20.1830533369882,13.0275917844817,9.54978752025092,8.20704498725306,7.57850175237612,77.6932015424036,6.4930934703184,11.144890870014,10.3708935327039,7.91147519419702,5.46776910884101,4.11800711771741,0,0,0,3.81868247206045,4.4287039101359,9.14937602070819,6.58832579012988,6.06356058441959,5.45906409365444,8.76618251501335,8.84391976261094,6.02038666563268,5.96228877142247,11.1841076355647,0,11.2137409532984,8.10746603239778,8.16694991045,7.4912697617084,6.25137664315879,7.3935060346825,4.55715346953825,2.72634295506848,2.17425708743405,6.62469014393091,5.05617793005085,6.08175645870493,6.26536838705446,2.98817892848929,2.68540043501222,3.17890167650024,1.9231271923195,2.06765338044408,2.22126189885925,1.752756553065,2.11734988787365,1.75424185331554,1.73181314952593,1.28564592399726,44.6658855721966,0.443971906748129,0.0897138566094757,0.167884616364078,9.27310051354514,12.0116784288756,3.84618410961257,3.21552568618599,63.1980851084558,31.0613513439387,28.0798394269378,30.9363577257274,29.730600545458,28.0883833105963,38.5250887668747,34.4261475118221,38.2773022740587,29.9073989929575,33.6544202638683,7.5764763736449,23.1434426572598,17.9270286041841,23.0951381214879,9.01336599300324,9.55986243940074,38.0041904540762,31.111293643073,33.6965170071406,35.8830040704592,34.7266640849628,36.4048838875127,28.9352258081937,31.3082995259811,31.4746369876761,33.8168520810982,31.0569993532213,30.8654752741928,34.6152156674778,31.7949667490298,32.5725789766145,29.46098382245,31.235140883099,35.4645256582882,30.6796580153978,30.4612588410035,30.3660434968802,30.5160865267898,30.6917297291648,44.3302394609613,30.4891996579128,28.3692909241623,31.9200213672358,31.2972419195651,25.8494858714729,23.4821943261669,35.0897412668113,33.7347554855828,46.8656413568666,43.6771009856641,46.6054349597047
|short_description=p1@Limch1
}}

Latest revision as of 04:14, 26 September 2015

Short description:p1@Limch1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Limch1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000117601, ENSMUST00000130228_5end
EntrezGene:Limch1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Limch1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G718.42
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A334.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C222.89
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.61
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C36.27
Mouse Granule cells, donor2.CNhs12357.11731-123E311.64
Mouse Granule cells, donor3.CNhs12108.11636-122C715.21
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E88.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D526.75
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F524.17
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D925.24
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F120.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D521.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.17
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D334.14
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F336.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D742.40
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.65
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.60
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E432.39
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E538.27
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I634.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D634.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F632.18
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E121.44
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F91.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G347.83
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A716.29
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G630.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.56
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D752.10
adrenal gland, embryo E14.CNhs11038.406-44C519.43
adrenal gland, embryo E16.CNhs11004.1254-43D627.71
adrenal gland, embryo E17.CNhs11043.1263-45I126.98
adrenal gland, embryo E18.CNhs11026.1262-18F529.84
adrenal gland, neonate N00.CNhs11191.1311-23C143.16
adrenal gland, neonate N25.CNhs11223.1377-27I347.25
amnion, adult pregnant day17.5.CNhs10488.583-22A84.45
aorta, adult.CNhs10498.46-23H148.59
bone (os femoris), adult.CNhs10483.56-12G213.27
bone (os femoris), neonate N02.CNhs11227.1985-43F553.06
bone (os femoris), neonate N16.CNhs11225.1525-43A630.03
bone (os femoris), neonate N20.CNhs11195.1350-25C331.03
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B241.57
cerebellum, neonate N30.CNhs11135.1395-42I239.79
colon, adult.CNhs10468.36-18H73.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A462.01
corpus striatum, adult.CNhs10487.19-21D861.76
corpus striatum, neonate N00.CNhs11226.630-43F111.18
cortex, adult.CNhs10473.12-14D543.11
cortex, neonate N30.CNhs11107.1392-42F240.91
diencephalon, adult.CNhs10482.20-12F250.70
diencephalon, neonate N30.CNhs11201.1388-42B258.08
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.17
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A221.02
epididymis, adult.CNhs10490.58-23B29.60
eyeball, adult.CNhs10484.31-12G415.36
eyeball, embryo E12.CNhs11016.345-16C611.58
eyeball, embryo E14.CNhs10521.399-16E210.58
eyeball, embryo E15.CNhs10593.426-16C910.62
eyeball, embryo E17.CNhs11023.1261-18D419.14
eyeball, neonate N00.CNhs11207.633-15C616.67
eyeball, neonate N01.CNhs11140.1532-43E719.35
eyeball, neonate N02.CNhs11205.1551-44G821.93
eyeball, neonate N16.CNhs11188.777-19A239.58
forelimb, embryo E11.CNhs10596.335-25E22.16
forelimb, embryo E12.CNhs10600.359-14H215.13
forelimb, embryo E13.CNhs10589.384-1E228.68
forelimb, embryo E14.CNhs10577.413-26A820.82
forelimb, embryo E15.CNhs11007.437-20E739.48
forelimb, embryo E17.CNhs10598.1517-43C435.87
forelimb, embryo E18.CNhs11008.1520-43B533.13
gonad, embryo E13.CNhs11044.1564-45I611.15
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E919.68
heart, embryo E12.CNhs11015.353-12F522.75
heart, embryo E13.CNhs11013.376-3I920.35
heart, embryo E14.CNhs10597.403-26D423.91
heart, embryo E15.CNhs11017.431-16C825.97
heart, embryo E16.CNhs11021.457-17C620.05
heart, embryo E17.CNhs11025.479-18E526.28
heart, embryo E18.CNhs11030.1283-20G323.07
heart, neonate N00.CNhs11213.639-21E327.44
heart, neonate N03.CNhs11221.1349-25I227.48
heart, neonate N10.CNhs11118.749-24G174.37
heart, neonate N16.CNhs11209.782-15G184.07
heart, neonate N20.CNhs11127.821-26I6105.56
heart, neonate N25.CNhs11196.1351-25D3113.51
heart, neonate N30.CNhs11202.1390-42D298.78
hippocampus, adult.CNhs10478.13-16E847.74
hippocampus, neonate N00.CNhs11228.627-43G118.11
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I519.41
intestine, embryo E13.CNhs11010.381-16D59.75
intestine, embryo E15.CNhs10602.976-16D89.15
intestine, embryo E16.CNhs10585.463-22H44.84
intestine, embryo E17.CNhs10582.482-18D34.45
intestine, embryo E18.CNhs10526.1289-20F74.95
intestine, neonate N00.CNhs11126.644-26D18.07
intestine, neonate N01.CNhs11192.1322-23E96.42
intestine, neonate N06.CNhs11102.688-20B85.03
intestine, neonate N07.CNhs11095.720-20F28.56
intestine, neonate N10.CNhs11098.755-23A55.07
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G13.39
kidney, embryo E14.CNhs10606.411-4I96.07
kidney, embryo E15.CNhs10997.434-16F818.05
kidney, embryo E16.CNhs10584.464-22A522.54
kidney, embryo E17.CNhs11028.483-18I219.96
kidney, embryo E18.CNhs11001.1288-20C719.78
kidney, neonate N00.CNhs11214.646-21G719.43
kidney, neonate N10.CNhs11206.758-6D533.14
kidney, neonate N20.CNhs11113.832-19I133.06
kidney, neonate N25.CNhs11122.1353-25F328.89
kidney, neonate N30.CNhs11203.1385-42H128.87
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F83.50
liver, embryo E13.CNhs10524.378-3H62.75
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G45.18
liver, neonate N00.CNhs11117.641-24F44.05
liver, neonate N03.CNhs11123.1345-25G22.75
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H26.70
liver, neonate N10.CNhs11115.751-24B95.93
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H13.05
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B1145.77
lung, embryo E12.CNhs10522.354-16G213.07
lung, embryo E14.CNhs10604.404-26F822.33
lung, embryo E15.CNhs11020.432-17C522.92
lung, embryo E16.CNhs10998.458-17B626.52
lung, embryo E17.CNhs10605.480-44A639.20
lung, embryo E18.CNhs10583.1287-20I678.79
lung, neonate N00.CNhs11224.640-42C6104.20
lung, neonate N06.CNhs11212.683-20E599.63
lung, neonate N07.CNhs11111.715-19A380.83
lung, neonate N10.CNhs11219.750-23E696.63
lung, neonate N20.CNhs11109.822-18A4134.70
lung, neonate N25.CNhs11119.1359-25C7120.19
lung, neonate N30.CNhs11133.1394-42H2145.37
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H26.35
medulla oblongata, adult.CNhs10477.17-12C273.37
medulla oblongata, neonate N30.CNhs11200.1396-42A373.96
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C254.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E113.57
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.88
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.28
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.52
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.51
olfactory brain, adult.CNhs10489.18-22I970.05
ovary, adult.CNhs10507.91-2I79.37
ovary, embryo E18.CNhs11040.505-44H710.68
ovary, neonate N00.CNhs11217.1299-22I416.29
oviduct, adult pregnant day01.CNhs10500.988-6G69.40
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F47.04
pancreas, embryo E15.CNhs11042.1556-45F25.44
pancreas, embryo E16.CNhs11003.460-26E57.54
pancreas, embryo E17.CNhs10599.1558-45G35.61
pancreas, embryo E18.CNhs10580.1535-43I712.30
pancreas, neonate N00.CNhs11105.645-26G99.82
pancreas, neonate N01.CNhs11138.1531-43D712.36
pancreas, neonate N02.CNhs11139.1539-43D815.33
pancreas, neonate N16.CNhs11136.787-43B69.48
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G841.53
pituitary gland, embryo E12.CNhs11018.346-16E616.75
pituitary gland, embryo E13.CNhs11009.370-44C79.44
pituitary gland, embryo E14.CNhs11037.398-44A516.72
pituitary gland, embryo E15.CNhs10592.427-16B919.68
pituitary gland, embryo E16.CNhs11036.449-43F623.01
pituitary gland, embryo E17.CNhs11039.1265-44F524.52
pituitary gland, neonate N00.CNhs11190.1308-22E917.66
placenta, adult pregnant day10.CNhs10472.539-13I76.81
placenta, adult pregnant day17.CNhs10464.577-18G33.60
prostate, adult.CNhs10470.859-1F8159.88
skin, adult.CNhs10492.30-1C313.85
skin, neonate N00.CNhs11124.650-25G420.18
skin, neonate N03.CNhs11215.662-22H313.03
skin, neonate N06.CNhs11097.693-20I59.55
skin, neonate N10.CNhs11108.762-6C48.21
small intestine, neonate N16.CNhs11114.790-21I17.58
spinal cord, adult.CNhs10505.24-13C977.69
spleen, adult.CNhs10465.25-2G26.49
spleen, embryo E16.CNhs11035.461-43C111.14
spleen, embryo E18.CNhs11011.1271-21F210.37
spleen, neonate N10.CNhs11116.752-24D17.91
spleen, neonate N20.CNhs11112.824-19H15.47
spleen, neonate N25.CNhs11099.1354-25G34.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E34.43
stomach, embryo E15.CNhs10603.1252-16G89.15
stomach, embryo E16.CNhs11022.459-17D46.59
stomach, embryo E17.CNhs11006.1035-18D56.06
stomach, embryo E18.CNhs10999.1286-20C65.46
stomach, neonate N03.CNhs11193.1340-24B88.77
stomach, neonate N07.CNhs11210.718-18A98.84
stomach, neonate N25.CNhs11104.1355-25E46.02
stomach, neonate N30.CNhs11134.1386-42I15.96
submandibular gland, adult.CNhs10469.59-29C111.18
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F511.21
testis, embryo E15.CNhs11034.443-27C58.11
testis, embryo E16.CNhs11033.470-26G58.17
testis, embryo E17.CNhs11029.486-18I57.49
testis, embryo E18.CNhs11027.503-18G56.25
testis, neonate N00.CNhs11189.1300-22B77.39
testis, neonate N07.CNhs11222.726-26I44.56
testis, neonate N10.CNhs11204.763-44D92.73
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E26.62
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I46.08
thymus, embryo E15.CNhs11005.430-45I26.27
thymus, embryo E16.CNhs11002.456-26C52.99
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C42.22
thymus, neonate N07.CNhs11211.713-19D31.75
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A21.75
thymus, neonate N25.CNhs11125.1362-25G71.73
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B444.67
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E49.27
uterus, adult pregnant day19.CNhs10497.590-15F512.01
uterus, adult.CNhs10509.92-27E53.85
vagina, adult.CNhs10502.89-27D53.22
vesicular gland, adult.CNhs10491.51-27F863.20
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A131.06
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A228.08
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A330.94
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D729.73
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A428.09
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A538.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A634.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A738.28
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A829.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A933.65
whole body, embryo E11.CNhs11014.324-5I87.58
whole body, embryo E12.CNhs10587.857-27C923.14
whole body, embryo E13.CNhs10512.372-23H217.93
whole body, embryo E14.5.CNhs10578.420-27D223.10
whole body, embryo E14.CNhs10519.395-14B19.01
whole body, embryo E16.CNhs10514.453-14F29.56
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G538.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G531.11
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G533.70
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G535.88
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G534.73
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G536.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G528.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G531.31
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G531.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G533.82
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G531.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G530.87
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G534.62
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G531.79
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G532.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G529.46
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G531.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G535.46
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G530.68
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G530.46
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G530.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G530.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G530.69
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G544.33
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G530.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G528.37
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G531.92
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G531.30
whole body, embryo E17.5.CNhs10513.490-9F925.85
whole body, embryo E17.CNhs10517.475-3I523.48
whole body, embryo E18.CNhs10516.493-3B335.09
whole body, neonate N00.CNhs10525.657-19C233.73
whole body, neonate N01.CNhs10576.659-23C646.87
whole body, neonate N06.CNhs10515.692-21D143.68
whole body, neonate N10.CNhs10518.761-6B446.61





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest3.19e-1692
anatomical conduit9.63e-11122
regional part of nervous system2.92e-1054
neurectoderm4.22e-1064
neural plate4.22e-1064
presumptive neural plate4.22e-1064
ecto-epithelium8.81e-1073
neural tube1.27e-0952
neural rod1.27e-0952
future spinal cord1.27e-0952
neural keel1.27e-0952
tube2.23e-09114
brain1.11e-0847
future brain1.11e-0847
central nervous system1.68e-0873
ectoderm-derived structure2.20e-0895
ectoderm2.20e-0895
presumptive ectoderm2.20e-0895
regional part of brain3.36e-0846
nervous system1.21e-0775
lung1.83e-0714
respiratory tube1.83e-0714
respiration organ1.83e-0714
pair of lungs1.83e-0714
lung primordium1.83e-0714
lung bud1.83e-0714
pre-chordal neural plate1.84e-0749
tissue2.27e-07349
anterior neural tube5.41e-0740
epithelial bud7.00e-0717
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