FFCP PHASE1:Mm9::chr6:113027348..113027376,+: Difference between revisions
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{{FFCP|EntrezGene=72895|HGNC=|MCL_coexpression_id=2044|UniProt=Q5XJV7|association_with_transcript=0bp_to_ENSMUST00000042889,ENSMUST00000143998_5end|description=CAGE_peak_1_at_Setd5_5end|id=chr6:113027348..113027376,+|ontology_enrichment_celltype=CL:0000540!2.66e-09!33;CL:0000047!2.66e-09!33;CL:0000031!2.66e-09!33;CL:0000404!2.66e-09!33;CL:0000117!4.98e-08!23;CL:0000337!4.98e-08!23|ontology_enrichment_celltype_v019_2=CL:0000540,2.66e-09,33;CL:0000047,2.66e-09,33;CL:0000031,2.66e-09,33;CL:0000404,2.66e-09,33;CL:0000117,4.98e-08,23;CL:0000337,4.98e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.59e-18!94;UBERON:0001017!2.58e-17!73;UBERON:0005743!2.58e-17!73;UBERON:0000033!1.01e-16!63;UBERON:0000073!1.01e-15!75;UBERON:0001016!1.01e-15!75;UBERON:0000955!1.07e-15!50;UBERON:0006238!1.07e-15!50;UBERON:0007811!1.48e-15!86;UBERON:0002616!3.96e-15!49;UBERON:0001049!4.80e-15!52;UBERON:0005068!4.80e-15!52;UBERON:0006241!4.80e-15!52;UBERON:0007135!4.80e-15!52;UBERON:0003056!1.01e-14!49;UBERON:0004121!1.31e-14!102;UBERON:0000924!1.31e-14!102;UBERON:0006601!1.31e-14!102;UBERON:0003080!1.31e-13!40;UBERON:0002346!1.93e-13!71;UBERON:0003075!1.93e-13!71;UBERON:0007284!1.93e-13!71;UBERON:0002780!3.11e-13!39;UBERON:0001890!3.11e-13!39;UBERON:0006240!3.11e-13!39;UBERON:0002020!1.61e-11!34;UBERON:0002791!2.05e-10!29;UBERON:0003528!2.05e-10!29;UBERON:0001893!2.05e-10!29;UBERON:0000956!1.53e-08!21;UBERON:0001869!1.53e-08!21;UBERON:0000203!1.53e-08!21;UBERON:0002021!2.11e-07!10;UBERON:0000411!2.11e-07!10;UBERON:0001950!2.11e-07!10;UBERON:0002619!6.06e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.58e-17,73;UBERON:0004121,1.12e-16,95;UBERON:0000924,1.12e-16,95;UBERON:0006601,1.12e-16,95;UBERON:0010371,1.54e-16,73;UBERON:0000073,2.18e-16,54;UBERON:0002346,4.44e-16,64;UBERON:0003075,4.44e-16,64;UBERON:0007284,4.44e-16,64;UBERON:0001016,1.01e-15,75;UBERON:0001049,4.80e-15,52;UBERON:0005068,4.80e-15,52;UBERON:0006241,4.80e-15,52;UBERON:0007135,4.80e-15,52;UBERON:0003056,1.01e-14,49;UBERON:0000955,3.38e-14,47;UBERON:0006238,3.38e-14,47;UBERON:0002616,1.21e-13,46;UBERON:0003080,1.31e-13,40;UBERON:0002780,3.11e-13,39;UBERON:0001890,3.11e-13,39;UBERON:0006240,3.11e-13,39;UBERON:0002020,1.61e-11,34;UBERON:0003528,2.05e-10,29;UBERON:0002791,2.05e-10,29;UBERON:0001893,2.05e-10,29;UBERON:0010314,2.11e-10,92;UBERON:0000956,1.53e-08,21;UBERON:0001869,1.53e-08,21;UBERON:0000203,1.53e-08,21;UBERON:0002021,2.11e-07,10;UBERON:0000411,2.11e-07,10;UBERON:0001950,2.11e-07,10;UBERON:0002619,6.06e-07,17|phase1_expression=46.9236122017046,8.72438519098403,7.73498706962211,18.7527811010235,10.5188103288733,13.4303417529512,11.6806320297763,35.2506672995503,7.46180227403834,11.4691617897777,10.1018601253048,8.45584885350566,38.5201642345213,35.7549445893699,27.9812199925157,20.2475267389826,24.4846657344851,36.7513422642347,34.9641805694634,35.2243410992365,32.8267099983129,18.6666988257664,15.6719873483361,6.07971206614945,3.67054849707472,5.16808767703518,6.8921919385452,4.30942465371778,4.94060890586572,4.78857246543868,3.76941868114018,23.4961349180064,21.52726756546,63.3926724061755,7.22129049378186,7.31432439577366,10.8209758819056,18.4153917524239,21.0960543021426,20.9409497589519,32.9409633297368,19.8083190637949,30.1016418879315,19.3881099682389,20.1740093126834,18.5382219683298,30.5132624295735,17.4420125104357,14.0599156950062,16.9154012194627,17.6382891247957,14.3752564364972,36.2410429084711,29.0144856804538,37.642505503956,7.20326420900652,23.4957420749781,11.8604581223812,51.9953304409166,38.0873505075864,53.8756692980252,12.5372476865579,24.0109594950008,6.74924787961049,10.8775299882367,12.7886420690298,16.1784059679939,22.6688800139717,45.6234294157302,46.712054662765,49.6366908789262,43.7046006137819,31.8050698970323,48.2613748906919,38.529879349331,52.3954708367712,74.8787990795843,49.2873125008825,45.7747469103606,50.6443344883944,38.5162979566145,62.5096044668112,29.5933978941464,39.3933827022176,47.5202550585879,56.5686884109442,42.1420175165345,43.431070877295,8.93569081331572,12.6204505378332,31.0155002910795,12.9063581547208,9.51959867190851,7.55584468292944,20.1430689408777,19.7131830322828,18.2577746171277,16.3613109674935,12.7295142255406,21.9070536196411,42.2530259330042,34.6481489018658,61.153257529595,49.7746692207332,4.76280290224671,4.56047757855178,2.52762222507392,14.1588010851634,50.2339494275513,31.6181756208077,18.5629299639765,26.1840311348441,23.522780720118,23.5127319262091,27.868523591162,27.6466500925286,28.427421289453,28.9198713839823,33.6152009740952,38.6622771374308,36.6596920644253,26.6681389224372,13.0474232852686,60.6056249813903,49.2199761011619,13.5392239260553,8.2672435909085,6.59893004092748,6.60765180779936,46.1355169366854,41.632554856495,51.3926300141615,51.4519987769138,49.6087987220841,43.6354893575076,43.6428997652268,43.6890870917857,28.2403823284911,29.8212854951736,39.1421851948842,38.7758920028857,29.4274693674845,37.4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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72895 | |||
|HGNC= | |||
|MCL_coexpression_id=2044 | |||
|TSSclassifier=NA | |||
|UniProt=Q5XJV7 | |||
|association_with_transcript=0bp_to_ENSMUST00000042889,ENSMUST00000143998_5end | |||
|cluster_id=chr6:113027348..113027376,+ | |||
|description=CAGE_peak_1_at_Setd5_5end | |||
|id=chr6:113027348..113027376,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.66e-09!33;CL:0000047!2.66e-09!33;CL:0000031!2.66e-09!33;CL:0000404!2.66e-09!33;CL:0000117!4.98e-08!23;CL:0000337!4.98e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.66e-09,33;CL:0000047,2.66e-09,33;CL:0000031,2.66e-09,33;CL:0000404,2.66e-09,33;CL:0000117,4.98e-08,23;CL:0000337,4.98e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.59e-18!94;UBERON:0001017!2.58e-17!73;UBERON:0005743!2.58e-17!73;UBERON:0000033!1.01e-16!63;UBERON:0000073!1.01e-15!75;UBERON:0001016!1.01e-15!75;UBERON:0000955!1.07e-15!50;UBERON:0006238!1.07e-15!50;UBERON:0007811!1.48e-15!86;UBERON:0002616!3.96e-15!49;UBERON:0001049!4.80e-15!52;UBERON:0005068!4.80e-15!52;UBERON:0006241!4.80e-15!52;UBERON:0007135!4.80e-15!52;UBERON:0003056!1.01e-14!49;UBERON:0004121!1.31e-14!102;UBERON:0000924!1.31e-14!102;UBERON:0006601!1.31e-14!102;UBERON:0003080!1.31e-13!40;UBERON:0002346!1.93e-13!71;UBERON:0003075!1.93e-13!71;UBERON:0007284!1.93e-13!71;UBERON:0002780!3.11e-13!39;UBERON:0001890!3.11e-13!39;UBERON:0006240!3.11e-13!39;UBERON:0002020!1.61e-11!34;UBERON:0002791!2.05e-10!29;UBERON:0003528!2.05e-10!29;UBERON:0001893!2.05e-10!29;UBERON:0000956!1.53e-08!21;UBERON:0001869!1.53e-08!21;UBERON:0000203!1.53e-08!21;UBERON:0002021!2.11e-07!10;UBERON:0000411!2.11e-07!10;UBERON:0001950!2.11e-07!10;UBERON:0002619!6.06e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.58e-17,73;UBERON:0004121,1.12e-16,95;UBERON:0000924,1.12e-16,95;UBERON:0006601,1.12e-16,95;UBERON:0010371,1.54e-16,73;UBERON:0000073,2.18e-16,54;UBERON:0002346,4.44e-16,64;UBERON:0003075,4.44e-16,64;UBERON:0007284,4.44e-16,64;UBERON:0001016,1.01e-15,75;UBERON:0001049,4.80e-15,52;UBERON:0005068,4.80e-15,52;UBERON:0006241,4.80e-15,52;UBERON:0007135,4.80e-15,52;UBERON:0003056,1.01e-14,49;UBERON:0000955,3.38e-14,47;UBERON:0006238,3.38e-14,47;UBERON:0002616,1.21e-13,46;UBERON:0003080,1.31e-13,40;UBERON:0002780,3.11e-13,39;UBERON:0001890,3.11e-13,39;UBERON:0006240,3.11e-13,39;UBERON:0002020,1.61e-11,34;UBERON:0003528,2.05e-10,29;UBERON:0002791,2.05e-10,29;UBERON:0001893,2.05e-10,29;UBERON:0010314,2.11e-10,92;UBERON:0000956,1.53e-08,21;UBERON:0001869,1.53e-08,21;UBERON:0000203,1.53e-08,21;UBERON:0002021,2.11e-07,10;UBERON:0000411,2.11e-07,10;UBERON:0001950,2.11e-07,10;UBERON:0002619,6.06e-07,17 | |||
|phase1_expression=46.9236122017046,8.72438519098403,7.73498706962211,18.7527811010235,10.5188103288733,13.4303417529512,11.6806320297763,35.2506672995503,7.46180227403834,11.4691617897777,10.1018601253048,8.45584885350566,38.5201642345213,35.7549445893699,27.9812199925157,20.2475267389826,24.4846657344851,36.7513422642347,34.9641805694634,35.2243410992365,32.8267099983129,18.6666988257664,15.6719873483361,6.07971206614945,3.67054849707472,5.16808767703518,6.8921919385452,4.30942465371778,4.94060890586572,4.78857246543868,3.76941868114018,23.4961349180064,21.52726756546,63.3926724061755,7.22129049378186,7.31432439577366,10.8209758819056,18.4153917524239,21.0960543021426,20.9409497589519,32.9409633297368,19.8083190637949,30.1016418879315,19.3881099682389,20.1740093126834,18.5382219683298,30.5132624295735,17.4420125104357,14.0599156950062,16.9154012194627,17.6382891247957,14.3752564364972,36.2410429084711,29.0144856804538,37.642505503956,7.20326420900652,23.4957420749781,11.8604581223812,51.9953304409166,38.0873505075864,53.8756692980252,12.5372476865579,24.0109594950008,6.74924787961049,10.8775299882367,12.7886420690298,16.1784059679939,22.6688800139717,45.6234294157302,46.712054662765,49.6366908789262,43.7046006137819,31.8050698970323,48.2613748906919,38.529879349331,52.3954708367712,74.8787990795843,49.2873125008825,45.7747469103606,50.6443344883944,38.5162979566145,62.5096044668112,29.5933978941464,39.3933827022176,47.5202550585879,56.5686884109442,42.1420175165345,43.431070877295,8.93569081331572,12.6204505378332,31.0155002910795,12.9063581547208,9.51959867190851,7.55584468292944,20.1430689408777,19.7131830322828,18.2577746171277,16.3613109674935,12.7295142255406,21.9070536196411,42.2530259330042,34.6481489018658,61.153257529595,49.7746692207332,4.76280290224671,4.56047757855178,2.52762222507392,14.1588010851634,50.2339494275513,31.6181756208077,18.5629299639765,26.1840311348441,23.522780720118,23.5127319262091,27.868523591162,27.6466500925286,28.427421289453,28.9198713839823,33.6152009740952,38.6622771374308,36.6596920644253,26.6681389224372,13.0474232852686,60.6056249813903,49.2199761011619,13.5392239260553,8.2672435909085,6.59893004092748,6.60765180779936,46.1355169366854,41.632554856495,51.3926300141615,51.4519987769138,49.6087987220841,43.6354893575076,43.6428997652268,43.6890870917857,28.2403823284911,29.8212854951736,39.1421851948842,38.7758920028857,29.4274693674845,37.4529229995126,36.3198610984073,42.8629944653365,43.0462100157095,41.2287588062807,46.8253101037618,36.862126791516,57.2991422908492,53.6650928700044,41.2087976963841,44.4875598760957,42.8350164822265,43.4200307820761,43.7875387000685,4.21327912387941,5.40430604940902,9.09323198065896,29.2047339275058,29.315757497637,30.2504263254505,35.985199808952,31.679041311332,34.5558332867727,30.229412817553,36.7534559917478,33.3948879170105,30.2790123840804,27.580133965288,33.2382119138008,28.0703975856638,27.6633145266724,25.2308067269499,47.5255283754928,50.1145462287115,9.91256348951394,12.9580777665137,40.7380558522297,38.0868141851119,33.6344074050664,26.6222252502812,27.7972554806088,23.0173007596197,12.3377556001573,15.9757986082291,20.1068167040216,20.8904295643208,21.2510854959841,13.4822911298133,13.8328351919804,10.7536287557358,20.863469104839,37.7020091612105,51.845558409617,34.0097717501675,38.7904974335251,38.5747009396752,32.5668166189925,23.4700135287567,24.1778040875717,14.4374681788507,8.30067355844017,23.6920050116854,18.8696635308675,21.8116249013308,20.2860121388503,17.1235783424216,16.5506803657923,25.6049562331221,10.7009249671523,11.5315793538994,63.258010872036,10.7920874823866,13.7296576170407,16.1650481886152,14.7105879087968,7.71909634181387,38.9829231251536,26.3393062360974,28.6818358537966,28.856664581782,37.0810592295833,47.5717771134757,56.6543865308713,41.1731996979955,43.0343943409901,38.0919266195893,53.0984379629432,37.3608357551883,35.5731062643745,35.7283174696334,22.6186925908908,8.70249094109935,28.5223278351041,32.8364728102632,35.481680387302,40.3208201877179,16.0656246469142,19.9452032491455,32.1818383804582,28.5020283336546,41.3612923646974,41.8195396416966,42.3317480756549,67.0891377969533,35.2185310457158,40.9158201075837,41.1099289064384,56.552551690238,47.8338087151865,44.5164009168138,51.47227915573,46.3566045552825,34.5137359683903,26.9486506132029,28.7207379116513,34.8919397548412,26.5771703592696,27.9765984628974,24.0338312646446,28.7191646287229,25.6678112436999,26.5470876666085,14.7586052004998,22.6898195146011,64.6835250932197,42.8545403794518,31.5635188429921,45.8681254967608,62.6011024757226,62.6074549783268,50.5165493248511,28.6197052167723,18.5390649370331,31.3511464878454,16.3191014560672,41.8811082471359,41.6578220875436,35.1021223081867,32.4692775688531,32.8281799490123,18.3632927076806,39.6810146302491,25.9723738812736,42.7220816683871,28.890346269675,22.4158463835582,24.4682667620635,17.8446975101088,12.4084253895514,9.51669875800874,9.95039811391851,15.2747298882418,42.70535913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| |||
|short_description=p1@Setd5 | |||
}} |
Latest revision as of 11:14, 26 September 2015
Short description: | p1@Setd5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Setd5_5end |
Coexpression cluster: | MCL_coexpression_mm9:2044 |
Association with transcript: | 0bp_to_ENSMUST00000042889, ENSMUST00000143998_5end |
EntrezGene: | Setd5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.66e-09 | 33 |
neuronal stem cell | 2.66e-09 | 33 |
neuroblast | 2.66e-09 | 33 |
electrically signaling cell | 2.66e-09 | 33 |
CNS neuron (sensu Vertebrata) | 4.98e-08 | 23 |
neuroblast (sensu Vertebrata) | 4.98e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.58e-17 | 73 |
ectoderm-derived structure | 1.12e-16 | 95 |
ectoderm | 1.12e-16 | 95 |
presumptive ectoderm | 1.12e-16 | 95 |
ecto-epithelium | 1.54e-16 | 73 |
regional part of nervous system | 2.18e-16 | 54 |
neurectoderm | 4.44e-16 | 64 |
neural plate | 4.44e-16 | 64 |
presumptive neural plate | 4.44e-16 | 64 |
nervous system | 1.01e-15 | 75 |
neural tube | 4.80e-15 | 52 |
neural rod | 4.80e-15 | 52 |
future spinal cord | 4.80e-15 | 52 |
neural keel | 4.80e-15 | 52 |
pre-chordal neural plate | 1.01e-14 | 49 |
brain | 3.38e-14 | 47 |
future brain | 3.38e-14 | 47 |
regional part of brain | 1.21e-13 | 46 |
anterior neural tube | 1.31e-13 | 40 |
regional part of forebrain | 3.11e-13 | 39 |
forebrain | 3.11e-13 | 39 |
future forebrain | 3.11e-13 | 39 |
gray matter | 1.61e-11 | 34 |
brain grey matter | 2.05e-10 | 29 |
regional part of telencephalon | 2.05e-10 | 29 |
telencephalon | 2.05e-10 | 29 |
structure with developmental contribution from neural crest | 2.11e-10 | 92 |
cerebral cortex | 1.53e-08 | 21 |
cerebral hemisphere | 1.53e-08 | 21 |
pallium | 1.53e-08 | 21 |
occipital lobe | 2.11e-07 | 10 |
visual cortex | 2.11e-07 | 10 |
neocortex | 2.11e-07 | 10 |
regional part of cerebral cortex | 6.06e-07 | 17 |