FFCP PHASE1:Mm9::chr7:134006101..134006125,+: Difference between revisions
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{{FFCP|EntrezGene=233876|HGNC=|MCL_coexpression_id=68|UniProt=D3YWU7|association_with_transcript=106bp_to_ENSMUST00000132808_5end|description=CAGE_peak_9_at_Hirip3_5end|id=chr7:134006101..134006125,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000893,1.33e-12,6;CL:0002489,1.33e-12,6;CL:0000898,1.33e-12,6;CL:0000809,1.33e-12,6;CL:0000810,1.33e-12,6;CL:0000895,1.33e-12,6;CL:0000808,1.33e-12,6;CL:0000894,1.33e-12,6;CL:0000806,1.33e-12,6;CL:0000807,1.33e-12,6;CL:0000805,1.33e-12,6;CL:0002425,1.33e-12,6;CL:0002436,1.33e-12,6;CL:0002427,1.33e-12,6;CL:0002428,1.33e-12,6;CL:0002429,1.33e-12,6;CL:0002433,1.33e-12,6;CL:0002431,1.33e-12,6;CL:0002432,1.33e-12,6;CL:0000624,1.74e-09,8;CL:0000791,1.92e-08,9;CL:0000789,1.92e-08,9;CL:0002420,1.92e-08,9;CL:0002419,1.92e-08,9;CL:0000790,1.92e-08,9;CL:0000084,6.35e-07,11;CL:0000827,6.35e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!9.74e-11!29;UBERON:0002390!7.59e-09!45;UBERON:0003061!7.59e-09!45;UBERON:0002193!2.33e-08!48;UBERON:0002370!7.71e-08!23;UBERON:0000974!7.71e-08!23;UBERON:0004807!7.71e-08!23;UBERON:0005058!7.71e-08!23;UBERON:0003351!7.71e-08!23;UBERON:0009113!7.71e-08!23;UBERON:0003295!7.71e-08!23;UBERON:0009722!7.71e-08!23;UBERON:0005562!7.71e-08!23;UBERON:0007690!7.71e-08!23;UBERON:0000153!7.89e-08!94;UBERON:0006562!4.05e-07!24;UBERON:0003408!4.05e-07!24;UBERON:0001557!4.05e-07!24;UBERON:0001042!4.05e-07!24;UBERON:0008814!4.05e-07!24;UBERON:0009145!4.05e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.51e-24,29;UBERON:0005057,2.51e-24,29;UBERON:0002370,3.31e-22,23;UBERON:0000974,3.31e-22,23;UBERON:0004807,3.31e-22,23;UBERON:0005058,3.31e-22,23;UBERON:0003351,3.31e-22,23;UBERON:0009113,3.31e-22,23;UBERON:0003295,3.31e-22,23;UBERON:0009722,3.31e-22,23;UBERON:0005562,3.31e-22,23;UBERON:0007690,3.31e-22,23;UBERON:0006562,3.27e-21,24;UBERON:0003408,3.27e-21,24;UBERON:0001557,3.27e-21,24;UBERON:0001042,3.27e-21,24;UBERON:0008814,3.27e-21,24;UBERON:0009145,3.27e-21,24;UBERON:0000077,8.37e-20,35;UBERON:0002193,7.22e-19,48;UBERON:0002405,7.22e-19,48;UBERON:0000072,1.15e-18,27;UBERON:0002390,1.77e-17,45;UBERON:0003061,1.77e-17,45;UBERON:0007811,1.43e-13,36;UBERON:0000065,1.06e-11,41;UBERON:0001004,2.21e-11,42;UBERON:0000153,4.46e-11,43;UBERON:0003929,4.89e-10,55;UBERON:0002530,1.09e-09,65;UBERON:0002368,4.91e-09,60;UBERON:0001041,7.06e-09,80;UBERON:0000949,1.61e-08,72;UBERON:0000490,4.94e-08,66;UBERON:0003081,6.42e-08,87;UBERON:0005911,1.35e-07,69|phase1_expression=0.160148847104794,0,0,0,0,0.33575854382378,0,0.129123323441576,1.40788722151667,1.17032263160997,8.04724450659873,5.98291192465023,0,0.174840804837995,0.333109761815663,0.607425802169478,0.699561878128147,0.630924330716475,0.137114433605739,0.84877930359606,0.17008658030214,0.297872853602656,0.261199789138935,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0.335565212115473,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0.311068836925433,0,0,0,0,0.122490799214954,0.287536413054709,0,0,0.638436690425939,0.46081959976873,0.131886287730194,0.365950574409639,0,0,0.56276261003168,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0.35333957451034,0.14084341977668,0,2.54805239706646,0,0,0,0,0,1.55362730188303,0.148442139064825,0.346970653532272,0,0.230615497256059,0.301445281105245,0,0,0,0,0,0.161766849947409,0.662524555381181,0.969750506270444,0,0.585561594023094,0,0.255457055208591,0.239630249011841,0.599902730993408,0.254140454146129,0.149790639404823,0.457500602818626,0.502617408451458,0.173824320192276,0,0,0.486723789203273,0.305518091550949,0,0,0,0.780722657776222,0,0.540186389416048,0.753524089178575,0.0680364991513279,0.12811372028485,0.187403449119458,0,0.862271971731369,0.378212160335639,0.527853372491847,0.43839146485515,0,0.696504333044333,0,0,1.40442637462647,0.51469581422943,0.284163499395593,0.414251545071004,0.938104239924385,0,0.23674473558521,0.393528463494808,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0,0.420579897128254,0.514523061896422,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0,0.502670417600539,0,0,0,0.432276099749388,0,0,0.685491075658373,0,0.203651327845314,0,0.420814919341911,0.252946148497029,0.147610147979602,0,0.123397163921801,0,0.333690211432188,0,0.674586337154561,0.202860121388503,0,0.25462585178142,0,0,0,2.87536413054709,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0.848725428875941,0.234690248288502,0.167506257441816,0,0,0,0,0.318909537314974,0,0,0.144649058581512,0,0,0,1.10374698521893,0.321101179975584,0.35163505977661,0,0,0,0.390438744296638,0.430846795465598,0,0,0.283076530788832,0,0.584511715822624,0,0,0.425820255624806,0.35613120733451,0.162886959353576,0,0,0.971122544619926,0.302323556964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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=233876 | |||
|HGNC= | |||
|MCL_coexpression_id=68 | |||
|TSSclassifier=NA | |||
|UniProt=D3YWU7 | |||
|association_with_transcript=106bp_to_ENSMUST00000132808_5end | |||
|cluster_id=chr7:134006101..134006125,+ | |||
|description=CAGE_peak_9_at_Hirip3_5end | |||
|id=chr7:134006101..134006125,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,1.33e-12,6;CL:0002489,1.33e-12,6;CL:0000898,1.33e-12,6;CL:0000809,1.33e-12,6;CL:0000810,1.33e-12,6;CL:0000895,1.33e-12,6;CL:0000808,1.33e-12,6;CL:0000894,1.33e-12,6;CL:0000806,1.33e-12,6;CL:0000807,1.33e-12,6;CL:0000805,1.33e-12,6;CL:0002425,1.33e-12,6;CL:0002436,1.33e-12,6;CL:0002427,1.33e-12,6;CL:0002428,1.33e-12,6;CL:0002429,1.33e-12,6;CL:0002433,1.33e-12,6;CL:0002431,1.33e-12,6;CL:0002432,1.33e-12,6;CL:0000624,1.74e-09,8;CL:0000791,1.92e-08,9;CL:0000789,1.92e-08,9;CL:0002420,1.92e-08,9;CL:0002419,1.92e-08,9;CL:0000790,1.92e-08,9;CL:0000084,6.35e-07,11;CL:0000827,6.35e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!9.74e-11!29;UBERON:0002390!7.59e-09!45;UBERON:0003061!7.59e-09!45;UBERON:0002193!2.33e-08!48;UBERON:0002370!7.71e-08!23;UBERON:0000974!7.71e-08!23;UBERON:0004807!7.71e-08!23;UBERON:0005058!7.71e-08!23;UBERON:0003351!7.71e-08!23;UBERON:0009113!7.71e-08!23;UBERON:0003295!7.71e-08!23;UBERON:0009722!7.71e-08!23;UBERON:0005562!7.71e-08!23;UBERON:0007690!7.71e-08!23;UBERON:0000153!7.89e-08!94;UBERON:0006562!4.05e-07!24;UBERON:0003408!4.05e-07!24;UBERON:0001557!4.05e-07!24;UBERON:0001042!4.05e-07!24;UBERON:0008814!4.05e-07!24;UBERON:0009145!4.05e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.51e-24,29;UBERON:0005057,2.51e-24,29;UBERON:0002370,3.31e-22,23;UBERON:0000974,3.31e-22,23;UBERON:0004807,3.31e-22,23;UBERON:0005058,3.31e-22,23;UBERON:0003351,3.31e-22,23;UBERON:0009113,3.31e-22,23;UBERON:0003295,3.31e-22,23;UBERON:0009722,3.31e-22,23;UBERON:0005562,3.31e-22,23;UBERON:0007690,3.31e-22,23;UBERON:0006562,3.27e-21,24;UBERON:0003408,3.27e-21,24;UBERON:0001557,3.27e-21,24;UBERON:0001042,3.27e-21,24;UBERON:0008814,3.27e-21,24;UBERON:0009145,3.27e-21,24;UBERON:0000077,8.37e-20,35;UBERON:0002193,7.22e-19,48;UBERON:0002405,7.22e-19,48;UBERON:0000072,1.15e-18,27;UBERON:0002390,1.77e-17,45;UBERON:0003061,1.77e-17,45;UBERON:0007811,1.43e-13,36;UBERON:0000065,1.06e-11,41;UBERON:0001004,2.21e-11,42;UBERON:0000153,4.46e-11,43;UBERON:0003929,4.89e-10,55;UBERON:0002530,1.09e-09,65;UBERON:0002368,4.91e-09,60;UBERON:0001041,7.06e-09,80;UBERON:0000949,1.61e-08,72;UBERON:0000490,4.94e-08,66;UBERON:0003081,6.42e-08,87;UBERON:0005911,1.35e-07,69 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.33575854382378,0,0.129123323441576,1.40788722151667,1.17032263160997,8.04724450659873,5.98291192465023,0,0.174840804837995,0.333109761815663,0.607425802169478,0.699561878128147,0.630924330716475,0.137114433605739,0.84877930359606,0.17008658030214,0.297872853602656,0.261199789138935,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0.335565212115473,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0.311068836925433,0,0,0,0,0.122490799214954,0.287536413054709,0,0,0.638436690425939,0.46081959976873,0.131886287730194,0.365950574409639,0,0,0.56276261003168,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0.35333957451034,0.14084341977668,0,2.54805239706646,0,0,0,0,0,1.55362730188303,0.148442139064825,0.346970653532272,0,0.230615497256059,0.301445281105245,0,0,0,0,0,0.161766849947409,0.662524555381181,0.969750506270444,0,0.585561594023094,0,0.255457055208591,0.239630249011841,0.599902730993408,0.254140454146129,0.149790639404823,0.457500602818626,0.502617408451458,0.173824320192276,0,0,0.486723789203273,0.305518091550949,0,0,0,0.780722657776222,0,0.540186389416048,0.753524089178575,0.0680364991513279,0.12811372028485,0.187403449119458,0,0.862271971731369,0.378212160335639,0.527853372491847,0.43839146485515,0,0.696504333044333,0,0,1.40442637462647,0.51469581422943,0.284163499395593,0.414251545071004,0.938104239924385,0,0.23674473558521,0.393528463494808,0.154267112887378,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0,0.420579897128254,0.514523061896422,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0,0.502670417600539,0,0,0,0.432276099749388,0,0,0.685491075658373,0,0.203651327845314,0,0.420814919341911,0.252946148497029,0.147610147979602,0,0.123397163921801,0,0.333690211432188,0,0.674586337154561,0.202860121388503,0,0.25462585178142,0,0,0,2.87536413054709,0,0.312037673114561,0,0,0,0.184753190166605,0.189491411770485,0.325929952884052,0.848725428875941,0.234690248288502,0.167506257441816,0,0,0,0,0.318909537314974,0,0,0.144649058581512,0,0,0,1.10374698521893,0.321101179975584,0.35163505977661,0,0,0,0.390438744296638,0.430846795465598,0,0,0.283076530788832,0,0.584511715822624,0,0,0.425820255624806,0.35613120733451,0.162886959353576,0,0,0.971122544619926,0.302323556964751,0.943025398779491,0.295301892880773,0,0,0,0.356497378384721,0.948110273807448,0,1.03135543248187,0.340439605753788,0.720244376125241,0.258717367565509,0.643011105094777,0.532020700926821,0.891844088010353,0.329098041204242,0,0.23467170806371,0,0,0.32977250588296,0,0.180938774784468,0.119372344003136,0.328281799490123,0.582961673259701,0.18542530201051,0.854354403989263,0.619160603889667,0.370389054739423,1.13021074202815,1.6403307326523,0.686334519619568,0,0.139951452323658,0.276399947608848,0,0.316335993581135,0,0.324016022465404,0.209088296014469,0.436725127492355,0.404593039154462,0.165306911450672,0,0,0,1.12738587736838,0.149516546043979,0,0.388902376688095,0.129159823477731,0.337912250981556,0.117357238645754,0.13020438484395,0,0.724752362478018,0.288030006257865,0.316011120628178,0.202725215290164,1.74608627180206,1.42912905275575,1.07416017400489,0.79472541912506,0.841368146639782,1.62458479892035,1.21159739937777,0.914481679859998,1.20991422164209,0.682205165178267,0.673482891482306,0.116876902181569,0,0.221985953374065,0.0897138566094757,0,0,0.187682475451182,0,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0.755393897389701,1.35004500046361,0.45032120322422,0.453142408984205,0.51776031175182,0.62272408550506,0.798049746802062,0.512200817262403,0,0.209613162627982,0.551530525350042,0,0,0,0.252697211763798,0.25347929989024,0.754505365544305,0,0.256100609619477,0.114870937911227,0.952587382566147,0.579421629724277,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0,0.282328141245992,0.169229215783353,0,0.526139422875686,0,0,0.355905054372522,0.29551344712669,0.818462086339379,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p9@Hirip3 | |||
}} |
Latest revision as of 21:44, 25 September 2015
Short description: | p9@Hirip3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Hirip3_5end |
Coexpression cluster: | MCL_coexpression_mm9:68 |
Association with transcript: | 106bp_to_ENSMUST00000132808_5end |
EntrezGene: | Hirip3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymocyte | 1.33e-12 | 6 |
double negative thymocyte | 1.33e-12 | 6 |
naive T cell | 1.33e-12 | 6 |
double-positive, alpha-beta thymocyte | 1.33e-12 | 6 |
CD4-positive, alpha-beta thymocyte | 1.33e-12 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.33e-12 | 6 |
DN4 thymocyte | 1.33e-12 | 6 |
DN1 thymic pro-T cell | 1.33e-12 | 6 |
DN2 thymocyte | 1.33e-12 | 6 |
DN3 thymocyte | 1.33e-12 | 6 |
immature single positive thymocyte | 1.33e-12 | 6 |
early T lineage precursor | 1.33e-12 | 6 |
mature CD4 single-positive thymocyte | 1.33e-12 | 6 |
resting double-positive thymocyte | 1.33e-12 | 6 |
double-positive blast | 1.33e-12 | 6 |
CD69-positive double-positive thymocyte | 1.33e-12 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 1.33e-12 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.33e-12 | 6 |
CD24-positive, CD4 single-positive thymocyte | 1.33e-12 | 6 |
CD4-positive, alpha-beta T cell | 1.74e-09 | 8 |
mature alpha-beta T cell | 1.92e-08 | 9 |
alpha-beta T cell | 1.92e-08 | 9 |
immature T cell | 1.92e-08 | 9 |
mature T cell | 1.92e-08 | 9 |
immature alpha-beta T cell | 1.92e-08 | 9 |
T cell | 6.35e-07 | 11 |
pro-T cell | 6.35e-07 | 11 |