FFCP PHASE1:Mm9::chr7:3333018..3333050,+: Difference between revisions
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{{FFCP|EntrezGene=81904|HGNC=|MCL_coexpression_id=3621|UniProt=P62956,B9EJ14|association_with_transcript=-4bp_to_ENSMUST00000092891,uc009euu.1_5end|description=CAGE_peak_2_at_Cacng7_5end|id=chr7:3333018..3333050,+|ontology_enrichment_celltype=CL:0000221!3.24e-13!44;CL:0000133!3.24e-13!44;CL:0002319!4.07e-13!43;CL:0000055!2.11e-11!50;CL:0000540!6.90e-11!33;CL:0000047!6.90e-11!33;CL:0000031!6.90e-11!33;CL:0000404!6.90e-11!33;CL:0000117!3.85e-10!23;CL:0000337!3.85e-10!23;CL:0000393!3.14e-09!39;CL:0000211!3.14e-09!39|ontology_enrichment_celltype_v019_2=CL:0000221,1.02e-13,44;CL:0000133,1.02e-13,44;CL:0002319,1.36e-13,43;CL:0000117,1.24e-11,23;CL:0000337,1.24e-11,23;CL:0000540,3.28e-11,33;CL:0000047,3.28e-11,33;CL:0000031,3.28e-11,33;CL:0000404,3.28e-11,33;CL:0000393,3.36e-09,39;CL:0000211,3.36e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.13e-24!73;UBERON:0005743!3.13e-24!73;UBERON:0000073!3.71e-23!75;UBERON:0001016!3.71e-23!75;UBERON:0002346!5.96e-21!71;UBERON:0003075!5.96e-21!71;UBERON:0007284!5.96e-21!71;UBERON:0004121!8.39e-21!102;UBERON:0000924!8.39e-21!102;UBERON:0006601!8.39e-21!102;UBERON:0000033!8.91e-19!63;UBERON:0001049!8.05e-18!52;UBERON:0005068!8.05e-18!52;UBERON:0006241!8.05e-18!52;UBERON:0007135!8.05e-18!52;UBERON:0000955!3.53e-16!50;UBERON:0006238!3.53e-16!50;UBERON:0003056!6.39e-16!49;UBERON:0002616!1.76e-15!49;UBERON:0002780!2.70e-12!39;UBERON:0001890!2.70e-12!39;UBERON:0006240!2.70e-12!39;UBERON:0003080!2.85e-12!40;UBERON:0002020!5.59e-12!34;UBERON:0000153!1.54e-09!94;UBERON:0002791!2.51e-09!29;UBERON:0003528!2.51e-09!29;UBERON:0001893!2.51e-09!29;UBERON:0000468!7.90e-09!333;UBERON:0007811!8.01e-08!86;UBERON:0000922!1.99e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.61e-26,73;UBERON:0002346,4.85e-25,64;UBERON:0003075,4.85e-25,64;UBERON:0007284,4.85e-25,64;UBERON:0001016,1.04e-24,75;UBERON:0004121,7.44e-23,95;UBERON:0000924,7.44e-23,95;UBERON:0006601,7.44e-23,95;UBERON:0000073,1.02e-20,54;UBERON:0010371,1.20e-20,73;UBERON:0001049,4.25e-20,52;UBERON:0005068,4.25e-20,52;UBERON:0006241,4.25e-20,52;UBERON:0007135,4.25e-20,52;UBERON:0000955,1.49e-17,47;UBERON:0006238,1.49e-17,47;UBERON:0003056,2.37e-17,49;UBERON:0002616,9.58e-17,46;UBERON:0002780,1.19e-13,39;UBERON:0001890,1.19e-13,39;UBERON:0006240,1.19e-13,39;UBERON:0003080,1.25e-13,40;UBERON:0010314,2.19e-13,92;UBERON:0002020,2.95e-13,34;UBERON:0003528,3.49e-10,29;UBERON:0002791,3.49e-10,29;UBERON:0001893,3.49e-10,29;UBERON:0003076,2.05e-07,12;UBERON:0003057,2.05e-07,12;UBERON:0000956,3.76e-07,21;UBERON:0001869,3.76e-07,21;UBERON:0000203,3.76e-07,21|phase1_expression=2.7225304007815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.608261587317087,4.03802854755699,3.9119567217402,3.48840250208714,3.51497892375155,3.30530828426282,2.79972843250725,1.43752564364972,0,0,0,0,0,1.03134418455488,7.28339259094552,4.23192783417626,6.33831403506179,0.338844532069132,0.889294796111139,0,0,0,5.99200221036809,9.22123932771731,4.25127410464758,4.05017814995072,2.94454945891935,3.99911378165325,5.52171352379034,3.30725157880376,5.65488279007595,1.83843757322004,2.20231761998777,1.65993539510744,1.99688493233117,5.53922408466814,5.21479568533735,3.12548022334056,3.07101298901519,1.12552522006336,1.5279824777681,4.41942878210502,6.26435395516053,4.47358669980721,0.151452386666368,0.0755715601067855,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,1.69012103732017,0,0,0,0,0,0,0.11418387971906,0,0,2.08182392119363,1.21786191324856,0.922461989024234,0.753613202763113,1.17588707135705,0.125666591329675,0,0.144599356919912,0,0.970601099684455,0.220841518460394,0,0,7.31951992528868,10.8912287542997,0.255457055208591,0,0,0,1.3481157546434,3.66000482254901,4.27224797183739,2.60736480288415,1.53429274398198,4.57133698031032,3.24482526135515,7.02691610567182,0,0,0.841767423545896,5.72529949035896,3.90833577536904,7.20248519221397,4.67184935290717,4.150226448231,4.61209393025459,3.5606655332697,1.55222022443409,4.52692785158969,4.34943984385984,5.10258260075452,4.60311038097907,2.50242524303038,2.43776516565517,1.02891068203972,3.78165106955137,0,0,0,0.414251545071004,0.938104239924385,0.720248245844059,0.946978942340841,0.590292695242212,0.617068451549513,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0.164167464079095,0.486412857275134,0.146199987425332,0.439100230582101,0.268412837520744,1.68231958851302,3.19004298375782,0,0,4.47905326123991,3.25131340604614,2.96395161040815,1.61346819698674,2.89091456998331,1.71203063501303,1.42358718463353,0.494096864172033,0.502670417600539,0.596869416123452,0,1.79763881730844,0,0,2.0863469104839,1.5994791765362,1.1270773567308,1.4255592949172,0.581857461502877,0.911765658574141,0.569128834118316,0.147610147979602,0,0,0,0.333690211432188,0.982794975566015,0,0,0,0.50925170356284,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,1.89491411770485,2.281509670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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=81904 | |||
|HGNC= | |||
|MCL_coexpression_id=3621 | |||
|TSSclassifier=NA | |||
|UniProt=P62956,B9EJ14 | |||
|association_with_transcript=-4bp_to_ENSMUST00000092891,uc009euu.1_5end | |||
|cluster_id=chr7:3333018..3333050,+ | |||
|description=CAGE_peak_2_at_Cacng7_5end | |||
|id=chr7:3333018..3333050,+ | |||
|ontology_enrichment_celltype=CL:0000221!3.24e-13!44;CL:0000133!3.24e-13!44;CL:0002319!4.07e-13!43;CL:0000055!2.11e-11!50;CL:0000540!6.90e-11!33;CL:0000047!6.90e-11!33;CL:0000031!6.90e-11!33;CL:0000404!6.90e-11!33;CL:0000117!3.85e-10!23;CL:0000337!3.85e-10!23;CL:0000393!3.14e-09!39;CL:0000211!3.14e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.02e-13,44;CL:0000133,1.02e-13,44;CL:0002319,1.36e-13,43;CL:0000117,1.24e-11,23;CL:0000337,1.24e-11,23;CL:0000540,3.28e-11,33;CL:0000047,3.28e-11,33;CL:0000031,3.28e-11,33;CL:0000404,3.28e-11,33;CL:0000393,3.36e-09,39;CL:0000211,3.36e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.13e-24!73;UBERON:0005743!3.13e-24!73;UBERON:0000073!3.71e-23!75;UBERON:0001016!3.71e-23!75;UBERON:0002346!5.96e-21!71;UBERON:0003075!5.96e-21!71;UBERON:0007284!5.96e-21!71;UBERON:0004121!8.39e-21!102;UBERON:0000924!8.39e-21!102;UBERON:0006601!8.39e-21!102;UBERON:0000033!8.91e-19!63;UBERON:0001049!8.05e-18!52;UBERON:0005068!8.05e-18!52;UBERON:0006241!8.05e-18!52;UBERON:0007135!8.05e-18!52;UBERON:0000955!3.53e-16!50;UBERON:0006238!3.53e-16!50;UBERON:0003056!6.39e-16!49;UBERON:0002616!1.76e-15!49;UBERON:0002780!2.70e-12!39;UBERON:0001890!2.70e-12!39;UBERON:0006240!2.70e-12!39;UBERON:0003080!2.85e-12!40;UBERON:0002020!5.59e-12!34;UBERON:0000153!1.54e-09!94;UBERON:0002791!2.51e-09!29;UBERON:0003528!2.51e-09!29;UBERON:0001893!2.51e-09!29;UBERON:0000468!7.90e-09!333;UBERON:0007811!8.01e-08!86;UBERON:0000922!1.99e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.61e-26,73;UBERON:0002346,4.85e-25,64;UBERON:0003075,4.85e-25,64;UBERON:0007284,4.85e-25,64;UBERON:0001016,1.04e-24,75;UBERON:0004121,7.44e-23,95;UBERON:0000924,7.44e-23,95;UBERON:0006601,7.44e-23,95;UBERON:0000073,1.02e-20,54;UBERON:0010371,1.20e-20,73;UBERON:0001049,4.25e-20,52;UBERON:0005068,4.25e-20,52;UBERON:0006241,4.25e-20,52;UBERON:0007135,4.25e-20,52;UBERON:0000955,1.49e-17,47;UBERON:0006238,1.49e-17,47;UBERON:0003056,2.37e-17,49;UBERON:0002616,9.58e-17,46;UBERON:0002780,1.19e-13,39;UBERON:0001890,1.19e-13,39;UBERON:0006240,1.19e-13,39;UBERON:0003080,1.25e-13,40;UBERON:0010314,2.19e-13,92;UBERON:0002020,2.95e-13,34;UBERON:0003528,3.49e-10,29;UBERON:0002791,3.49e-10,29;UBERON:0001893,3.49e-10,29;UBERON:0003076,2.05e-07,12;UBERON:0003057,2.05e-07,12;UBERON:0000956,3.76e-07,21;UBERON:0001869,3.76e-07,21;UBERON:0000203,3.76e-07,21 | |||
|phase1_expression=2.7225304007815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.608261587317087,4.03802854755699,3.9119567217402,3.48840250208714,3.51497892375155,3.30530828426282,2.79972843250725,1.43752564364972,0,0,0,0,0,1.03134418455488,7.28339259094552,4.23192783417626,6.33831403506179,0.338844532069132,0.889294796111139,0,0,0,5.99200221036809,9.22123932771731,4.25127410464758,4.05017814995072,2.94454945891935,3.99911378165325,5.52171352379034,3.30725157880376,5.65488279007595,1.83843757322004,2.20231761998777,1.65993539510744,1.99688493233117,5.53922408466814,5.21479568533735,3.12548022334056,3.07101298901519,1.12552522006336,1.5279824777681,4.41942878210502,6.26435395516053,4.47358669980721,0.151452386666368,0.0755715601067855,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,1.69012103732017,0,0,0,0,0,0,0.11418387971906,0,0,2.08182392119363,1.21786191324856,0.922461989024234,0.753613202763113,1.17588707135705,0.125666591329675,0,0.144599356919912,0,0.970601099684455,0.220841518460394,0,0,7.31951992528868,10.8912287542997,0.255457055208591,0,0,0,1.3481157546434,3.66000482254901,4.27224797183739,2.60736480288415,1.53429274398198,4.57133698031032,3.24482526135515,7.02691610567182,0,0,0.841767423545896,5.72529949035896,3.90833577536904,7.20248519221397,4.67184935290717,4.150226448231,4.61209393025459,3.5606655332697,1.55222022443409,4.52692785158969,4.34943984385984,5.10258260075452,4.60311038097907,2.50242524303038,2.43776516565517,1.02891068203972,3.78165106955137,0,0,0,0.414251545071004,0.938104239924385,0.720248245844059,0.946978942340841,0.590292695242212,0.617068451549513,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0.164167464079095,0.486412857275134,0.146199987425332,0.439100230582101,0.268412837520744,1.68231958851302,3.19004298375782,0,0,4.47905326123991,3.25131340604614,2.96395161040815,1.61346819698674,2.89091456998331,1.71203063501303,1.42358718463353,0.494096864172033,0.502670417600539,0.596869416123452,0,1.79763881730844,0,0,2.0863469104839,1.5994791765362,1.1270773567308,1.4255592949172,0.581857461502877,0.911765658574141,0.569128834118316,0.147610147979602,0,0,0,0.333690211432188,0.982794975566015,0,0,0,0.50925170356284,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,1.89491411770485,2.28150967018836,0.848725428875941,0.938760993154008,0.167506257441816,0,0.195133647857799,0.472905432318573,0.664394068946325,0.478364305972461,0.327726629431476,0,0,0,0,0,0.275936746304732,1.76605648986571,2.69586879162067,1.3114795630134,0.252470927204373,2.52406575533005,1.17131623288992,3.44677436372478,0.716906393857656,2.00518806674155,0.849229592366497,2.42886421004937,2.92255857911312,0.395287777946524,13.4954952897159,0.425820255624806,6.7664929393557,9.28455668315384,1.31976098378028,0,2.42780636154981,1.51161778482376,1.50884063804718,1.77181135728464,1.84461088766356,1.80899805217755,1.09060118843252,0.356497378384721,0,0,1.03135543248187,1.36175842301515,4.14140516272013,5.56242340265844,1.92903331528433,2.48276327099183,1.96205699362278,3.1264313914403,1.522324745573,0.469343416127421,0,0,0,0.968786560175433,0.180938774784468,0.477489376012546,0,0.582961673259701,1.48340241608408,0,1.44470807574256,0.370389054739423,0.376736914009382,0,0,0,0,0,0,6.16855187483214,7.1161813494397,2.16010681643603,2.29997125615916,1.74690050996942,0.809186078308924,1.32245529160537,0.523511883968059,0,0,0.56369293868419,2.99033092087958,2.31641886639937,5.05573089694524,4.00395452780966,4.89972763923257,6.21993364822496,1.43224823328345,0.419437377702843,0.483168241652012,0.288030006257865,0.316011120628178,0.202725215290164,0.718976700153791,0.25984164595559,0.179026695667481,0.198681354781265,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,2.44184548711471,1.07656627931371,0.503653849092235,0,0,0.549454872801795,0.214368379079066,0,1.6942555278512,3.22227665555024,1.71868654031819,3.26521046453006,3.42541259885321,0.755393897389701,2.70009000092722,2.2516060161211,1.81256963593682,1.03552062350364,1.3492355185943,9.97562183502578,3.92687293234509,3.64660075602441,0.628839487883947,0.735374033800057,2.22246727801615,0.618105171716683,1.28367683836726,2.27427490587418,1.2673964994512,1.69763707247469,1.87283014939765,2.04880487695582,2.29741875822453,3.33405583898152,2.31768651889711,1.92909220463705,1.64834360321323,2.06078488188156,1.37147700954166,1.95223386775271,1.1921809497366,1.0174249164263,1.88218760830661,2.5384382367503,1.82927972872773,1.57841826862706,1.62964936615034,0.561142271657738,1.66089025373844,1.47756723563345,2.45538625901814,2.16911577660352,0.964533054905707,4.24677982494508,0.935726433781634,0.429742108096597,1.91288332068843,1.10295709559758,0.231867835620421 | |||
|short_description=p2@Cacng7 | |||
}} |
Latest revision as of 16:16, 26 September 2015
Short description: | p2@Cacng7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cacng7_5end |
Coexpression cluster: | MCL_coexpression_mm9:3621 |
Association with transcript: | -4bp_to_ENSMUST00000092891, uc009euu.1_5end |
EntrezGene: | Cacng7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.02e-13 | 44 |
neurectodermal cell | 1.02e-13 | 44 |
neural cell | 1.36e-13 | 43 |
CNS neuron (sensu Vertebrata) | 1.24e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.24e-11 | 23 |
neuron | 3.28e-11 | 33 |
neuronal stem cell | 3.28e-11 | 33 |
neuroblast | 3.28e-11 | 33 |
electrically signaling cell | 3.28e-11 | 33 |
electrically responsive cell | 3.36e-09 | 39 |
electrically active cell | 3.36e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.61e-26 | 73 |
neurectoderm | 4.85e-25 | 64 |
neural plate | 4.85e-25 | 64 |
presumptive neural plate | 4.85e-25 | 64 |
nervous system | 1.04e-24 | 75 |
ectoderm-derived structure | 7.44e-23 | 95 |
ectoderm | 7.44e-23 | 95 |
presumptive ectoderm | 7.44e-23 | 95 |
regional part of nervous system | 1.02e-20 | 54 |
ecto-epithelium | 1.20e-20 | 73 |
neural tube | 4.25e-20 | 52 |
neural rod | 4.25e-20 | 52 |
future spinal cord | 4.25e-20 | 52 |
neural keel | 4.25e-20 | 52 |
brain | 1.49e-17 | 47 |
future brain | 1.49e-17 | 47 |
pre-chordal neural plate | 2.37e-17 | 49 |
regional part of brain | 9.58e-17 | 46 |
regional part of forebrain | 1.19e-13 | 39 |
forebrain | 1.19e-13 | 39 |
future forebrain | 1.19e-13 | 39 |
anterior neural tube | 1.25e-13 | 40 |
structure with developmental contribution from neural crest | 2.19e-13 | 92 |
gray matter | 2.95e-13 | 34 |
brain grey matter | 3.49e-10 | 29 |
regional part of telencephalon | 3.49e-10 | 29 |
telencephalon | 3.49e-10 | 29 |
posterior neural tube | 2.05e-07 | 12 |
chordal neural plate | 2.05e-07 | 12 |
cerebral cortex | 3.76e-07 | 21 |
cerebral hemisphere | 3.76e-07 | 21 |
pallium | 3.76e-07 | 21 |