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FFCP PHASE1:Mm9::chr8:108129120..108129206,+: Difference between revisions

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{{FFCP|EntrezGene=75687|HGNC=|UniProt=G5E8A2,Q68FE6|association_with_transcript=0bp_to_ENSMUST00000043531,NM_001081241,uc009ndj.1_5end|description=CAGE_peak_1_at_Fam65a_5end|id=chr8:108129120..108129206,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.01e-14!75;UBERON:0001016!6.01e-14!75;UBERON:0001017!9.45e-14!73;UBERON:0005743!9.45e-14!73;UBERON:0000477!9.97e-11!154;UBERON:0001049!2.39e-10!52;UBERON:0005068!2.39e-10!52;UBERON:0006241!2.39e-10!52;UBERON:0007135!2.39e-10!52;UBERON:0000955!2.51e-10!50;UBERON:0006238!2.51e-10!50;UBERON:0000025!2.96e-10!114;UBERON:0002616!7.90e-10!49;UBERON:0002020!1.94e-09!34;UBERON:0002791!4.83e-09!29;UBERON:0003528!4.83e-09!29;UBERON:0001893!4.83e-09!29;UBERON:0004111!1.71e-08!122;UBERON:0007811!3.02e-08!86;UBERON:0003080!1.09e-07!40;UBERON:0004121!1.62e-07!102;UBERON:0000924!1.62e-07!102;UBERON:0006601!1.62e-07!102;UBERON:0000956!2.13e-07!21;UBERON:0001869!2.13e-07!21;UBERON:0000203!2.13e-07!21;UBERON:0002780!2.21e-07!39;UBERON:0001890!2.21e-07!39;UBERON:0006240!2.21e-07!39;UBERON:0002619!8.16e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.01e-14,75;UBERON:0001017,9.45e-14,73;UBERON:0000073,2.12e-10,54;UBERON:0001049,2.39e-10,52;UBERON:0005068,2.39e-10,52;UBERON:0006241,2.39e-10,52;UBERON:0007135,2.39e-10,52;UBERON:0000025,2.96e-10,114;UBERON:0000955,6.96e-10,47;UBERON:0006238,6.96e-10,47;UBERON:0002020,1.94e-09,34;UBERON:0002616,2.18e-09,46;UBERON:0010314,2.75e-09,92;UBERON:0003528,4.83e-09,29;UBERON:0002791,4.83e-09,29;UBERON:0001893,4.83e-09,29;UBERON:0004111,1.71e-08,122;UBERON:0004121,2.90e-08,95;UBERON:0000924,2.90e-08,95;UBERON:0006601,2.90e-08,95;UBERON:0003080,1.09e-07,40;UBERON:0002346,1.50e-07,64;UBERON:0003075,1.50e-07,64;UBERON:0007284,1.50e-07,64;UBERON:0000956,2.13e-07,21;UBERON:0001869,2.13e-07,21;UBERON:0000203,2.13e-07,21;UBERON:0002780,2.21e-07,39;UBERON:0001890,2.21e-07,39;UBERON:0006240,2.21e-07,39;UBERON:0002619,8.16e-07,17|phase1_expression=9.12848428497326,1.04692622291808,1.36499771816861,1.81478526784098,1.00179145989269,2.85394762250213,2.33612640595526,10.0716192284429,4.08287294239834,3.97909694747389,0.856089841127525,0.957265907944037,12.3264525550468,12.4136971434976,10.3264026162855,9.71881283471165,4.89693314689703,9.46386496074713,10.2835825204304,11.8829102503448,18.0291775120268,26.3121020682346,30.2991755401165,2.55987876469451,2.06468352960453,1.14846392823004,1.7230479846363,1.939241094173,1.52018735565099,3.02436155711917,1.55211357458713,11.4305521222734,15.9916844771988,0,3.17736781726402,1.99481574430191,2.6542016314108,7.11503772252743,3.906676722619,6.28228492768558,3.52938892818609,5.46436387966757,6.79714494243615,11.330713617802,11.1514624341466,12.114085642671,37.5547845287059,13.9536100083486,20.4308149943059,18.2764105129826,12.0388322597812,27.3129872293446,17.1138258178891,17.4086914082723,14.1159395639835,13.6347501099052,18.9112070359579,29.9089813520917,15.3760510253294,20.1016572123373,15.8457850876545,19.9918273920788,18.6751907183339,18.4479442042687,9.88866362566974,26.2877642530057,20.0732074047331,20.3635701820424,13.894408049336,14.3106294631592,15.5640471400023,16.5677570954206,15.6816664075646,11.7591167246356,15.5269663049543,9.19218786610021,12.1127469099328,20.3022867555448,19.5080297235429,18.8597391454177,19.0294298693012,17.1901412283731,17.588528937087,10.6924895906019,21.8501494320838,15.0260578591571,15.233769845504,14.3527573285481,13.1006314466408,17.7593166250946,17.6817338108023,7.74381489283248,6.11974200336975,8.09554787456726,6.49776417447669,7.6164570806547,11.3759980306719,11.759692257886,9.35229616570328,10.2468476607999,7.74638808771743,3.84979432242953,10.1922095882658,14.2213340630666,2.16491041011214,3.54703811665138,3.0331466700887,7.9928715803342,24.3401610628341,15.1410981846121,9.88866362566974,8.8294988710521,10.3776973765226,8.28974523039424,11.7588707135705,12.9436589069566,16.5620628382031,24.7264900333049,15.0383793831479,13.9119490954772,18.5506875506731,13.091631834651,3.72783522436244,22.5441213698891,21.9919042154128,5.36459815938042,31.8708231185748,24.5960119707297,33.0382590389968,20.8208988772704,26.0775343606617,28.774846633846,38.2413504423008,39.3801804288709,17.454195743003,27.9054972476543,10.3876151127323,13.6847667671102,6.31806896084187,11.7847439296425,4.55421550369463,2.5289231487682,8.10279584124071,7.83665052745718,13.6753363294169,10.8896662242122,10.3071897015702,12.1590584247337,5.82033580918674,5.8622884852024,7.03804496655795,5.91828477554452,7.78532297831674,9.05455632957633,9.67176041117334,7.56330213910274,20.3641824320838,13.8967869841946,18.4706274607135,16.3629360303046,9.85009451920604,9.00310307305074,17.5191104333056,13.1832035270761,14.8096428371883,14.4171045745253,22.2666923161684,25.1045486089414,21.8864600384929,20.3567655458078,33.0760742947091,24.8539978623065,20.4181607220677,25.9018388207517,39.74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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=75687
|HGNC=
|TSSclassifier=NA
|UniProt=G5E8A2,Q68FE6
|association_with_transcript=0bp_to_ENSMUST00000043531,NM_001081241,uc009ndj.1_5end
|cluster_id=chr8:108129120..108129206,+
|description=CAGE_peak_1_at_Fam65a_5end
|id=chr8:108129120..108129206,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!6.01e-14!75;UBERON:0001016!6.01e-14!75;UBERON:0001017!9.45e-14!73;UBERON:0005743!9.45e-14!73;UBERON:0000477!9.97e-11!154;UBERON:0001049!2.39e-10!52;UBERON:0005068!2.39e-10!52;UBERON:0006241!2.39e-10!52;UBERON:0007135!2.39e-10!52;UBERON:0000955!2.51e-10!50;UBERON:0006238!2.51e-10!50;UBERON:0000025!2.96e-10!114;UBERON:0002616!7.90e-10!49;UBERON:0002020!1.94e-09!34;UBERON:0002791!4.83e-09!29;UBERON:0003528!4.83e-09!29;UBERON:0001893!4.83e-09!29;UBERON:0004111!1.71e-08!122;UBERON:0007811!3.02e-08!86;UBERON:0003080!1.09e-07!40;UBERON:0004121!1.62e-07!102;UBERON:0000924!1.62e-07!102;UBERON:0006601!1.62e-07!102;UBERON:0000956!2.13e-07!21;UBERON:0001869!2.13e-07!21;UBERON:0000203!2.13e-07!21;UBERON:0002780!2.21e-07!39;UBERON:0001890!2.21e-07!39;UBERON:0006240!2.21e-07!39;UBERON:0002619!8.16e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.01e-14,75;UBERON:0001017,9.45e-14,73;UBERON:0000073,2.12e-10,54;UBERON:0001049,2.39e-10,52;UBERON:0005068,2.39e-10,52;UBERON:0006241,2.39e-10,52;UBERON:0007135,2.39e-10,52;UBERON:0000025,2.96e-10,114;UBERON:0000955,6.96e-10,47;UBERON:0006238,6.96e-10,47;UBERON:0002020,1.94e-09,34;UBERON:0002616,2.18e-09,46;UBERON:0010314,2.75e-09,92;UBERON:0003528,4.83e-09,29;UBERON:0002791,4.83e-09,29;UBERON:0001893,4.83e-09,29;UBERON:0004111,1.71e-08,122;UBERON:0004121,2.90e-08,95;UBERON:0000924,2.90e-08,95;UBERON:0006601,2.90e-08,95;UBERON:0003080,1.09e-07,40;UBERON:0002346,1.50e-07,64;UBERON:0003075,1.50e-07,64;UBERON:0007284,1.50e-07,64;UBERON:0000956,2.13e-07,21;UBERON:0001869,2.13e-07,21;UBERON:0000203,2.13e-07,21;UBERON:0002780,2.21e-07,39;UBERON:0001890,2.21e-07,39;UBERON:0006240,2.21e-07,39;UBERON:0002619,8.16e-07,17
|phase1_expression=9.12848428497326,1.04692622291808,1.36499771816861,1.81478526784098,1.00179145989269,2.85394762250213,2.33612640595526,10.0716192284429,4.08287294239834,3.97909694747389,0.856089841127525,0.957265907944037,12.3264525550468,12.4136971434976,10.3264026162855,9.71881283471165,4.89693314689703,9.46386496074713,10.2835825204304,11.8829102503448,18.0291775120268,26.3121020682346,30.2991755401165,2.55987876469451,2.06468352960453,1.14846392823004,1.7230479846363,1.939241094173,1.52018735565099,3.02436155711917,1.55211357458713,11.4305521222734,15.9916844771988,0,3.17736781726402,1.99481574430191,2.6542016314108,7.11503772252743,3.906676722619,6.28228492768558,3.52938892818609,5.46436387966757,6.79714494243615,11.330713617802,11.1514624341466,12.114085642671,37.5547845287059,13.9536100083486,20.4308149943059,18.2764105129826,12.0388322597812,27.3129872293446,17.1138258178891,17.4086914082723,14.1159395639835,13.6347501099052,18.9112070359579,29.9089813520917,15.3760510253294,20.1016572123373,15.8457850876545,19.9918273920788,18.6751907183339,18.4479442042687,9.88866362566974,26.2877642530057,20.0732074047331,20.3635701820424,13.894408049336,14.3106294631592,15.5640471400023,16.5677570954206,15.6816664075646,11.7591167246356,15.5269663049543,9.19218786610021,12.1127469099328,20.3022867555448,19.5080297235429,18.8597391454177,19.0294298693012,17.1901412283731,17.588528937087,10.6924895906019,21.8501494320838,15.0260578591571,15.233769845504,14.3527573285481,13.1006314466408,17.7593166250946,17.6817338108023,7.74381489283248,6.11974200336975,8.09554787456726,6.49776417447669,7.6164570806547,11.3759980306719,11.759692257886,9.35229616570328,10.2468476607999,7.74638808771743,3.84979432242953,10.1922095882658,14.2213340630666,2.16491041011214,3.54703811665138,3.0331466700887,7.9928715803342,24.3401610628341,15.1410981846121,9.88866362566974,8.8294988710521,10.3776973765226,8.28974523039424,11.7588707135705,12.9436589069566,16.5620628382031,24.7264900333049,15.0383793831479,13.9119490954772,18.5506875506731,13.091631834651,3.72783522436244,22.5441213698891,21.9919042154128,5.36459815938042,31.8708231185748,24.5960119707297,33.0382590389968,20.8208988772704,26.0775343606617,28.774846633846,38.2413504423008,39.3801804288709,17.454195743003,27.9054972476543,10.3876151127323,13.6847667671102,6.31806896084187,11.7847439296425,4.55421550369463,2.5289231487682,8.10279584124071,7.83665052745718,13.6753363294169,10.8896662242122,10.3071897015702,12.1590584247337,5.82033580918674,5.8622884852024,7.03804496655795,5.91828477554452,7.78532297831674,9.05455632957633,9.67176041117334,7.56330213910274,20.3641824320838,13.8967869841946,18.4706274607135,16.3629360303046,9.85009451920604,9.00310307305074,17.5191104333056,13.1832035270761,14.8096428371883,14.4171045745253,22.2666923161684,25.1045486089414,21.8864600384929,20.3567655458078,33.0760742947091,24.8539978623065,20.4181607220677,25.9018388207517,39.74480027862,22.1244916615462,2.31293148088659,2.3800550999719,7.03851226766272,8.36052018697579,7.7320476793256,7.86565746031036,7.11609740303585,5.51654315726422,8.54152310780121,5.92916237006439,10.0534083520108,8.95304124185179,7.79856348476481,4.49409704327111,4.53889904736858,8.16479220342906,9.67306294860717,9.36837803399776,12.3978509240388,10.5898690479563,10.861339281387,19.9185728488505,21.5004226222475,21.4034714570423,16.7988638790271,15.3012483263033,8.59712618552732,11.8460025058427,9.04171377520734,10.1187950573184,10.5487263122022,8.92355491083942,5.60176873919124,9.78166867332756,12.1601420081277,6.04035109013779,18.6898668485561,12.6527922207291,11.5453939052387,8.5876818502018,6.81710171383266,9.16642690590398,35.2878593218215,6.253216588426,13.2001630918041,8.31750920298422,9.38760993154008,15.7455881995307,19.5195785526531,35.1240566144038,24.4334473364596,29.0118743439895,37.1529610971945,25.7265404103709,27.1115421529456,28.3512154819763,9.04747703635634,8.70249094109935,7.86822836830458,4.13905119457099,18.3027672586083,19.1055049145291,12.7869257393807,17.9254358315105,11.042787679569,13.2749173060857,14.4333676480975,19.1175038362042,14.9275111635204,20.9476632783736,19.8357243820698,19.5811424800579,15.4162233399144,31.4894890093371,11.9229671574946,9.97167380536629,13.845391545054,15.3422214364458,13.2745138339963,8.49732226542435,6.95344181018927,9.8074641473067,11.5167738223501,13.5271465095328,10.3371317267288,10.5424781548477,11.7644134866958,12.9575070753685,9.48767477174989,18.5643977846736,11.5749465956288,6.48219938512717,7.50280365939976,9.00215547132688,9.3990323830405,12.1290795969408,14.973960874793,19.790221692449,28.395276675709,29.444657850071,7.49796553386871,8.57408515295696,10.9795810153216,9.58975506357678,6.44610657616937,5.9090723908222,6.99554007911642,25.7741169794608,13.6696704638282,11.3512777379772,14.6303676622072,13.9392658183471,20.2307457027117,14.6418030852174,25.4967644990783,28.8299991786735,23.9085954681653,13.3653886522116,6.95939185878498,12.6058069618646,7.56037385752609,8.78170843260769,8.07941485860857,9.97996163247673,16.2000773221658,12.5642852152334,8.55458823725833,9.94142900939081,1.12738587736838,11.2137409532984,9.43113395605456,11.4726201122988,9.68698676082983,10.4752797804282,13.378725205616,10.8069639420479,8.49360689848258,4.34851417486811,4.03242008761012,33.8131899072151,15.6098415773426,11.91447103112,9.87398254631242,20.5880700017604,26.8219828954708,29.8084714809523,33.9685912501528,30.2899349844443,39.9323666872199,36.8015575749468,38.6907786536817,41.0824563804207,53.2958673947954,13.3770926332975,22.8645531975287,18.8399098879899,28.3725001655293,15.0687883345109,13.7008207079363,10.0733393346996,5.78794623513478,3.51100472824754,33.3203587144069,33.1434170285167,26.9260891316516,36.7765810215491,26.0331357512844,20.3956352295219,27.675922509504,28.8205570063501,29.0011141749891,30.5478583933574,5.60451676954554,7.58147259461959,7.0000778359195,14.3432963070293,7.33646069197938,6.25067928730048,11.3345831178824,11.5379632053781,14.1204452220399,10.3605856823157,9.12525479604863,10.1858224348481,10.3942073291569,11.2044016708521,11.8317066048563,13.3362233559261,13.7902347874378,13.3107362119956,9.89006161927936,9.86232764900462,9.25746981440622,7.27650805253284,11.921809497366,9.44751708110135,8.37573485696442,10.3229821627845,7.86590283352922,8.68130047744881,12.4939784738193,7.2948495315506,14.2362021749009,12.5100692616966,6.95692773388472,9.45114731234393,12.5389297137742,17.7365510335942,11.462648813825,12.0327790267047,11.6685882561994,11.0295709559758,13.6802023016049
|short_description=p1@Fam65a
}}

Latest revision as of 07:29, 27 September 2015

Short description:p1@Fam65a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Fam65a_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000043531, NM_001081241, uc009ndj.1_5end
EntrezGene:Fam65a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Fam65a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.13
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.96
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E412.33
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E812.41
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A110.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.72
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A29.46
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.28
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.88
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A318.03
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H226.31
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I930.30
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C13.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I311.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G615.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.12
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.28
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H25.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.80
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D811.33
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.15
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.11
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B737.55
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.95
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B820.43
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C318.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.04
Mouse Astrocytes, donor3.CNhs12107.11633-122C427.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A217.11
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I917.41
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A114.12
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C113.63
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E118.91
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C529.91
Mouse Granule cells, donor1.CNhs12131.11713-123C315.38
Mouse Granule cells, donor2.CNhs12357.11731-123E320.10
Mouse Granule cells, donor3.CNhs12108.11636-122C715.85
Mouse Meningeal cells, donor1.CNhs12132.11716-123C619.99
Mouse Meningeal cells, donor3.CNhs12109.11639-122D118.68
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C718.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E79.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D226.29
Mouse Microglia, donor1.CNhs12629.11718-123C820.07
Mouse Microglia, donor2.CNhs12634.11736-123E820.36
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D513.89
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.31
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D915.56
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.68
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.76
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F215.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F320.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.51
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.86
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F419.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D817.19
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E417.59
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I621.85
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.03
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.23
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E114.35
Mouse Schwann, donor1.CNhs12507.11728-123D913.10
Mouse Schwann, donor2.CNhs12573.11746-123F917.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G317.68
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.10
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.62
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I711.76
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I810.25
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.75
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.99
accessory axillary lymph node, adult.CNhs10475.1063-29H924.34
adrenal gland, adult.CNhs10508.49-24D715.14
adrenal gland, embryo E14.CNhs11038.406-44C59.89
adrenal gland, embryo E16.CNhs11004.1254-43D68.83
adrenal gland, embryo E17.CNhs11043.1263-45I110.38
adrenal gland, embryo E18.CNhs11026.1262-18F58.29
adrenal gland, neonate N00.CNhs11191.1311-23C111.76
adrenal gland, neonate N25.CNhs11223.1377-27I312.94
amnion, adult pregnant day17.5.CNhs10488.583-22A816.56
aorta, adult.CNhs10498.46-23H124.73
bone (os femoris), adult.CNhs10483.56-12G215.04
bone (os femoris), neonate N02.CNhs11227.1985-43F513.91
bone (os femoris), neonate N16.CNhs11225.1525-43A618.55
bone (os femoris), neonate N20.CNhs11195.1350-25C313.09
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B222.54
cerebellum, neonate N30.CNhs11135.1395-42I221.99
colon, adult.CNhs10468.36-18H75.36
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C731.87
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D124.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D433.04
corpora quadrigemina, adult.CNhs10501.16-22A420.82
corpus striatum, adult.CNhs10487.19-21D826.08
corpus striatum, neonate N00.CNhs11226.630-43F128.77
cortex, adult.CNhs10473.12-14D538.24
cortex, neonate N30.CNhs11107.1392-42F239.38
diencephalon, adult.CNhs10482.20-12F217.45
diencephalon, neonate N30.CNhs11201.1388-42B227.91
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B110.39
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A213.68
epididymis, adult.CNhs10490.58-23B26.32
eyeball, adult.CNhs10484.31-12G411.78
eyeball, embryo E12.CNhs11016.345-16C64.55
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C98.10
eyeball, embryo E17.CNhs11023.1261-18D47.84
eyeball, neonate N00.CNhs11207.633-15C613.68
eyeball, neonate N01.CNhs11140.1532-43E710.89
eyeball, neonate N02.CNhs11205.1551-44G810.31
eyeball, neonate N16.CNhs11188.777-19A212.16
forelimb, embryo E11.CNhs10596.335-25E25.82
forelimb, embryo E12.CNhs10600.359-14H25.86
forelimb, embryo E13.CNhs10589.384-1E27.04
forelimb, embryo E14.CNhs10577.413-26A85.92
forelimb, embryo E15.CNhs11007.437-20E77.79
forelimb, embryo E17.CNhs10598.1517-43C49.05
forelimb, embryo E18.CNhs11008.1520-43B59.67
gonad, embryo E13.CNhs11044.1564-45I67.56
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C820.36
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D213.90
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D518.47
heart, embryo E11.CNhs10586.331-24E916.36
heart, embryo E12.CNhs11015.353-12F59.85
heart, embryo E13.CNhs11013.376-3I99.00
heart, embryo E14.CNhs10597.403-26D417.52
heart, embryo E15.CNhs11017.431-16C813.18
heart, embryo E16.CNhs11021.457-17C614.81
heart, embryo E17.CNhs11025.479-18E514.42
heart, embryo E18.CNhs11030.1283-20G322.27
heart, neonate N00.CNhs11213.639-21E325.10
heart, neonate N03.CNhs11221.1349-25I221.89
heart, neonate N10.CNhs11118.749-24G120.36
heart, neonate N16.CNhs11209.782-15G133.08
heart, neonate N20.CNhs11127.821-26I624.85
heart, neonate N25.CNhs11196.1351-25D320.42
heart, neonate N30.CNhs11202.1390-42D225.90
hippocampus, adult.CNhs10478.13-16E839.74
hippocampus, neonate N00.CNhs11228.627-43G122.12
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I57.04
intestine, embryo E13.CNhs11010.381-16D58.36
intestine, embryo E15.CNhs10602.976-16D87.73
intestine, embryo E16.CNhs10585.463-22H47.87
intestine, embryo E17.CNhs10582.482-18D37.12
intestine, embryo E18.CNhs10526.1289-20F75.52
intestine, neonate N00.CNhs11126.644-26D18.54
intestine, neonate N01.CNhs11192.1322-23E95.93
intestine, neonate N06.CNhs11102.688-20B810.05
intestine, neonate N07.CNhs11095.720-20F28.95
intestine, neonate N10.CNhs11098.755-23A57.80
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E34.54
intestine, neonate N30.CNhs11131.1384-42G18.16
kidney, embryo E14.CNhs10606.411-4I99.67
kidney, embryo E15.CNhs10997.434-16F89.37
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I210.59
kidney, embryo E18.CNhs11001.1288-20C710.86
kidney, neonate N00.CNhs11214.646-21G719.92
kidney, neonate N10.CNhs11206.758-6D521.50
kidney, neonate N20.CNhs11113.832-19I121.40
kidney, neonate N25.CNhs11122.1353-25F316.80
kidney, neonate N30.CNhs11203.1385-42H115.30
liver, adult pregnant day01.CNhs10466.508-5B28.60
liver, embryo E12.CNhs10601.355-15F811.85
liver, embryo E13.CNhs10524.378-3H69.04
liver, embryo E14.CNhs10594.409-16E110.12
liver, embryo E15.CNhs10520.433-16D710.55
liver, embryo E16.CNhs10523.462-17F58.92
liver, embryo E17.CNhs10510.481-18A35.60
liver, embryo E18.CNhs10579.499-43G49.78
liver, neonate N00.CNhs11117.641-24F412.16
liver, neonate N03.CNhs11123.1345-25G26.04
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H212.65
liver, neonate N10.CNhs11115.751-24B911.55
liver, neonate N20.CNhs11220.823-25A38.59
liver, neonate N25.CNhs11198.1368-26H16.82
liver, neonate N30.CNhs11106.1382-42D19.17
lung, adult.CNhs10474.28-22B135.29
lung, embryo E12.CNhs10522.354-16G26.25
lung, embryo E14.CNhs10604.404-26F813.20
lung, embryo E15.CNhs11020.432-17C58.32
lung, embryo E16.CNhs10998.458-17B69.39
lung, embryo E17.CNhs10605.480-44A615.75
lung, embryo E18.CNhs10583.1287-20I619.52
lung, neonate N00.CNhs11224.640-42C635.12
lung, neonate N06.CNhs11212.683-20E524.43
lung, neonate N07.CNhs11111.715-19A329.01
lung, neonate N10.CNhs11219.750-23E637.15
lung, neonate N20.CNhs11109.822-18A425.73
lung, neonate N25.CNhs11119.1359-25C727.11
lung, neonate N30.CNhs11133.1394-42H228.35
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.70
mammary gland, adult lactating day02.CNhs10480.595-22B67.87
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C218.30
medulla oblongata, neonate N30.CNhs11200.1396-42A319.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C712.79
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C217.93
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.04
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.27
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D719.12
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.93
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D920.95
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.84
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D519.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.42
olfactory brain, adult.CNhs10489.18-22I931.49
ovary, adult.CNhs10507.91-2I711.92
ovary, embryo E18.CNhs11040.505-44H79.97
ovary, neonate N00.CNhs11217.1299-22I413.85
oviduct, adult pregnant day01.CNhs10500.988-6G615.34
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F48.50
pancreas, embryo E15.CNhs11042.1556-45F26.95
pancreas, embryo E16.CNhs11003.460-26E59.81
pancreas, embryo E17.CNhs10599.1558-45G311.52
pancreas, embryo E18.CNhs10580.1535-43I713.53
pancreas, neonate N00.CNhs11105.645-26G910.34
pancreas, neonate N01.CNhs11138.1531-43D710.54
pancreas, neonate N02.CNhs11139.1539-43D811.76
pancreas, neonate N16.CNhs11136.787-43B612.96
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H518.56
pituitary gland, adult.CNhs10493.21-1G811.57
pituitary gland, embryo E12.CNhs11018.346-16E66.48
pituitary gland, embryo E13.CNhs11009.370-44C77.50
pituitary gland, embryo E14.CNhs11037.398-44A59.00
pituitary gland, embryo E15.CNhs10592.427-16B99.40
pituitary gland, embryo E16.CNhs11036.449-43F612.13
pituitary gland, embryo E17.CNhs11039.1265-44F514.97
pituitary gland, neonate N00.CNhs11190.1308-22E919.79
placenta, adult pregnant day10.CNhs10472.539-13I728.40
placenta, adult pregnant day17.CNhs10464.577-18G329.44
prostate, adult.CNhs10470.859-1F87.50
skin, adult.CNhs10492.30-1C38.57
skin, neonate N00.CNhs11124.650-25G410.98
skin, neonate N03.CNhs11215.662-22H39.59
skin, neonate N06.CNhs11097.693-20I56.45
skin, neonate N10.CNhs11108.762-6C45.91
small intestine, neonate N16.CNhs11114.790-21I17.00
spinal cord, adult.CNhs10505.24-13C925.77
spleen, adult.CNhs10465.25-2G213.67
spleen, embryo E16.CNhs11035.461-43C111.35
spleen, embryo E18.CNhs11011.1271-21F214.63
spleen, neonate N10.CNhs11116.752-24D113.94
spleen, neonate N20.CNhs11112.824-19H120.23
spleen, neonate N25.CNhs11099.1354-25G314.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C625.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C928.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D323.91
stomach, adult.CNhs10503.33-1H613.37
stomach, embryo E12.CNhs10588.356-43E36.96
stomach, embryo E15.CNhs10603.1252-16G812.61
stomach, embryo E16.CNhs11022.459-17D47.56
stomach, embryo E17.CNhs11006.1035-18D58.78
stomach, embryo E18.CNhs10999.1286-20C68.08
stomach, neonate N03.CNhs11193.1340-24B89.98
stomach, neonate N07.CNhs11210.718-18A916.20
stomach, neonate N25.CNhs11104.1355-25E412.56
stomach, neonate N30.CNhs11134.1386-42I18.55
submandibular gland, adult.CNhs10469.59-29C19.94
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F511.21
testis, embryo E15.CNhs11034.443-27C59.43
testis, embryo E16.CNhs11033.470-26G511.47
testis, embryo E17.CNhs11029.486-18I59.69
testis, embryo E18.CNhs11027.503-18G510.48
testis, neonate N00.CNhs11189.1300-22B713.38
testis, neonate N07.CNhs11222.726-26I410.81
testis, neonate N10.CNhs11204.763-44D98.49
testis, neonate N20.CNhs11110.839-18H34.35
testis, neonate N30.CNhs11130.1391-42E24.03
thymus, adult.CNhs10471.38-12B533.81
thymus, embryo E14.CNhs11041.402-44I415.61
thymus, embryo E15.CNhs11005.430-45I211.91
thymus, embryo E16.CNhs11002.456-26C59.87
thymus, embryo E17.CNhs10581.478-18C120.59
thymus, embryo E18.CNhs10595.1273-19G426.82
thymus, neonate N02.CNhs11181.1541-43F829.81
thymus, neonate N03.CNhs11137.2104-43C733.97
thymus, neonate N06.CNhs11197.681-26C430.29
thymus, neonate N07.CNhs11211.713-19D339.93
thymus, neonate N10.CNhs11194.748-24E436.80
thymus, neonate N20.CNhs11186.820-7A238.69
thymus, neonate N25.CNhs11125.1362-25G741.08
thymus, neonate N30.CNhs11132.1393-42G253.30
tongue, adult.CNhs10499.32-1B413.38
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H322.86
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F718.84
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G528.37
urinary bladder, adult.CNhs10481.879-12E415.07
uterus, adult pregnant day19.CNhs10497.590-15F513.70
uterus, adult.CNhs10509.92-27E510.07
vagina, adult.CNhs10502.89-27D55.79
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A133.32
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A233.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A326.93
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D736.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.03
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A520.40
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A728.82
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A829.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A930.55
whole body, embryo E11.CNhs11014.324-5I85.60
whole body, embryo E12.CNhs10587.857-27C97.58
whole body, embryo E13.CNhs10512.372-23H27.00
whole body, embryo E14.5.CNhs10578.420-27D214.34
whole body, embryo E14.CNhs10519.395-14B17.34
whole body, embryo E16.CNhs10514.453-14F26.25
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.12
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.36
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.39
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.20
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.83
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G513.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.79
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G513.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.26
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.28
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.32
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G514.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.51
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.45
whole body, embryo E17.5.CNhs10513.490-9F912.54
whole body, embryo E17.CNhs10517.475-3I517.74
whole body, embryo E18.CNhs10516.493-3B311.46
whole body, neonate N00.CNhs10525.657-19C212.03
whole body, neonate N01.CNhs10576.659-23C611.67
whole body, neonate N06.CNhs10515.692-21D111.03
whole body, neonate N10.CNhs10518.761-6B413.68





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system6.01e-1475
central nervous system9.45e-1473
regional part of nervous system2.12e-1054
neural tube2.39e-1052
neural rod2.39e-1052
future spinal cord2.39e-1052
neural keel2.39e-1052
tube2.96e-10114
brain6.96e-1047
future brain6.96e-1047
gray matter1.94e-0934
regional part of brain2.18e-0946
structure with developmental contribution from neural crest2.75e-0992
brain grey matter4.83e-0929
regional part of telencephalon4.83e-0929
telencephalon4.83e-0929
anatomical conduit1.71e-08122
ectoderm-derived structure2.90e-0895
ectoderm2.90e-0895
presumptive ectoderm2.90e-0895
anterior neural tube1.09e-0740
neurectoderm1.50e-0764
neural plate1.50e-0764
presumptive neural plate1.50e-0764
cerebral cortex2.13e-0721
cerebral hemisphere2.13e-0721
pallium2.13e-0721
regional part of forebrain2.21e-0739
forebrain2.21e-0739
future forebrain2.21e-0739
regional part of cerebral cortex8.16e-0717
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