FFCP PHASE1:Mm9::chr9:108957616..108957628,+: Difference between revisions
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{{FFCP|EntrezGene=66940|HGNC=|MCL_coexpression_id=1967|UniProt=E9Q0A6|association_with_transcript=154bp_to_ENSMUST00000151141_5end|description=CAGE_peak_6_at_Shisa5_5end|id=chr9:108957616..108957628,+|ontology_enrichment_celltype=CL:0002320!8.34e-12!46;CL:0000134!8.34e-12!46;CL:0000219!7.15e-11!54;CL:0000988!1.00e-10!32;CL:0002032!1.00e-10!32;CL:0000037!1.00e-10!32;CL:0000566!1.00e-10!32;CL:0000837!1.00e-10!32;CL:0000063!2.09e-09!66;CL:0000738!7.03e-09!17;CL:0002087!7.03e-09!17;CL:0002031!2.09e-08!25;CL:0000838!1.44e-07!12;CL:0000542!4.81e-07!13;CL:0000051!4.81e-07!13;CL:0000084!5.47e-07!11;CL:0000827!5.47e-07!11|ontology_enrichment_celltype_v019_2=CL:0002320,4.15e-13,46;CL:0000134,4.15e-13,46;CL:0000219,3.45e-12,54;CL:0000988,4.20e-12,32;CL:0002032,4.20e-12,32;CL:0000037,4.20e-12,32;CL:0000837,4.20e-12,32;CL:0002031,1.42e-09,25;CL:0000738,1.70e-09,17;CL:0002087,1.70e-09,17;CL:0000838,4.47e-08,12;CL:0000542,1.66e-07,13;CL:0000051,1.66e-07,13;CL:0000084,1.90e-07,11;CL:0000827,1.90e-07,11;CL:0000791,5.37e-07,9;CL:0000789,5.37e-07,9;CL:0002420,5.37e-07,9;CL:0002419,5.37e-07,9;CL:0000790,5.37e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.44e-17!48;UBERON:0002405!1.92e-16!70;UBERON:0002390!4.96e-16!45;UBERON:0003061!4.96e-16!45;UBERON:0002384!8.34e-12!46;UBERON:0004177!2.10e-09!29;UBERON:0005057!7.31e-09!51;UBERON:0004119!2.03e-08!130;UBERON:0000925!2.03e-08!130;UBERON:0006595!2.03e-08!130;UBERON:0001007!3.64e-08!128;UBERON:0001555!3.64e-08!128;UBERON:0007026!3.64e-08!128;UBERON:0004921!1.23e-07!126;UBERON:0004185!1.23e-07!126;UBERON:0002371!1.26e-07!16;UBERON:0003408!1.29e-07!24;UBERON:0002370!2.05e-07!23;UBERON:0000974!2.05e-07!23;UBERON:0004807!2.05e-07!23;UBERON:0005058!2.05e-07!23;UBERON:0003351!2.05e-07!23;UBERON:0009113!2.05e-07!23;UBERON:0003295!2.05e-07!23;UBERON:0009722!2.05e-07!23;UBERON:0005562!2.05e-07!23;UBERON:0007690!2.05e-07!23;UBERON:0000490!2.94e-07!66;UBERON:0003081!3.15e-07!88;UBERON:0002530!3.37e-07!65|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.82e-19,48;UBERON:0002405,1.82e-19,48;UBERON:0002390,4.90e-18,45;UBERON:0003061,4.90e-18,45;UBERON:0002384,4.15e-13,46;UBERON:0004177,2.03e-10,29;UBERON:0005057,2.03e-10,29;UBERON:0000077,1.46e-09,35;UBERON:0002371,1.49e-08,16;UBERON:0004119,1.51e-08,118;UBERON:0000925,1.51e-08,118;UBERON:0006595,1.51e-08,118;UBERON:0003408,1.81e-08,24;UBERON:0001007,2.77e-08,116;UBERON:0001555,2.77e-08,116;UBERON:0007026,2.77e-08,116;UBERON:0002370,2.98e-08,23;UBERON:0000974,2.98e-08,23;UBERON:0004807,2.98e-08,23;UBERON:0005058,2.98e-08,23;UBERON:0003351,2.98e-08,23;UBERON:0009113,2.98e-08,23;UBERON:0003295,2.98e-08,23;UBERON:0009722,2.98e-08,23;UBERON:0005562,2.98e-08,23;UBERON:0007690,2.98e-08,23;UBERON:0003081,5.26e-08,87;UBERON:0004921,1.01e-07,114;UBERON:0006562,1.73e-07,24;UBERON:0001557,1.73e-07,24;UBERON:0001042,1.73e-07,24;UBERON:0008814,1.73e-07,24;UBERON:0009145,1.73e-07,24;UBERON:0000490,2.93e-07,66;UBERON:0002530,4.10e-07,65|phase1_expression=1.12104192973356,1.74487703819681,4.09499315450582,1.51232105653415,3.00537437967808,1.51091344720701,1.86890112476421,17.3025253411712,17.317012824655,19.4273556847255,4.45166717386313,2.95156988282745,9.75844160607873,5.76974655965383,4.66353666541928,3.44207954562704,0,9.77932712610537,9.04955261797876,8.48779303596061,1.19060606211498,2.78014663362479,2.87319768052829,2.55987876469451,4.35877634027623,1.14846392823004,2.58457197695445,1.50829862880122,5.13063232532209,1.26015064879965,2.66076612786366,0.635030673459631,1.23012957516914,0,0.288851619751275,1.16364251750945,0.612508068787107,2.09265815368454,3.1253413780952,3.14114246384279,1.76469446409304,0.683045484958446,1.45653105909346,1.6366586336825,1.52065396829272,0.734187008646726,10.9534788208725,0.436050312760893,1.31811709640683,0.777719596297134,1.53985063787899,0,7.55021727259814,10.8804321301702,9.41062637598899,1.80081605225163,1.43266719969378,2.57836046138721,0.404632921719196,0.528990979272033,1.90149421051854,1.0165335962074,5.33576877666684,6.74924787961049,11.8663963508037,7.104801149461,3.89480143673926,2.30530983192933,0.518448061542388,0.540023753326763,0.630974884054146,0.856952953211411,1.32521124570968,0.857435594504678,0.287536413054709,0,0,0.383062014255563,0.614426133024974,0.659431438650969,0.731901148819277,0,0.279182999001381,0.56276261003168,0.45839474333043,0.883885756421003,0.711858403995515,0.372798891650601,3.25622631332691,2.26714680320357,20.2905142091174,3.44169550792555,0,1.61910957491345,0.649776417447669,0.896053774194671,1.82577746171277,1.70430322578058,1.55871602761721,2.82671659608272,1.12674735821344,2.56652954828636,2.54805239706646,0,0.432982082022428,0.253359865475099,1.01104889002957,2.39786147410026,6.73238497482646,2.3750742250372,1.38788261412909,0.913396434936424,2.07553947530453,3.46662073271032,2.23418543557839,2.13633205260448,2.22475470960936,2.4581890676385,6.19227386364912,0.323533699894818,1.10420759230197,0.48487525313522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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66940 | |||
|HGNC= | |||
|MCL_coexpression_id=1967 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q0A6 | |||
|association_with_transcript=154bp_to_ENSMUST00000151141_5end | |||
|cluster_id=chr9:108957616..108957628,+ | |||
|description=CAGE_peak_6_at_Shisa5_5end | |||
|id=chr9:108957616..108957628,+ | |||
|ontology_enrichment_celltype=CL:0002320!8.34e-12!46;CL:0000134!8.34e-12!46;CL:0000219!7.15e-11!54;CL:0000988!1.00e-10!32;CL:0002032!1.00e-10!32;CL:0000037!1.00e-10!32;CL:0000566!1.00e-10!32;CL:0000837!1.00e-10!32;CL:0000063!2.09e-09!66;CL:0000738!7.03e-09!17;CL:0002087!7.03e-09!17;CL:0002031!2.09e-08!25;CL:0000838!1.44e-07!12;CL:0000542!4.81e-07!13;CL:0000051!4.81e-07!13;CL:0000084!5.47e-07!11;CL:0000827!5.47e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,4.15e-13,46;CL:0000134,4.15e-13,46;CL:0000219,3.45e-12,54;CL:0000988,4.20e-12,32;CL:0002032,4.20e-12,32;CL:0000037,4.20e-12,32;CL:0000837,4.20e-12,32;CL:0002031,1.42e-09,25;CL:0000738,1.70e-09,17;CL:0002087,1.70e-09,17;CL:0000838,4.47e-08,12;CL:0000542,1.66e-07,13;CL:0000051,1.66e-07,13;CL:0000084,1.90e-07,11;CL:0000827,1.90e-07,11;CL:0000791,5.37e-07,9;CL:0000789,5.37e-07,9;CL:0002420,5.37e-07,9;CL:0002419,5.37e-07,9;CL:0000790,5.37e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.44e-17!48;UBERON:0002405!1.92e-16!70;UBERON:0002390!4.96e-16!45;UBERON:0003061!4.96e-16!45;UBERON:0002384!8.34e-12!46;UBERON:0004177!2.10e-09!29;UBERON:0005057!7.31e-09!51;UBERON:0004119!2.03e-08!130;UBERON:0000925!2.03e-08!130;UBERON:0006595!2.03e-08!130;UBERON:0001007!3.64e-08!128;UBERON:0001555!3.64e-08!128;UBERON:0007026!3.64e-08!128;UBERON:0004921!1.23e-07!126;UBERON:0004185!1.23e-07!126;UBERON:0002371!1.26e-07!16;UBERON:0003408!1.29e-07!24;UBERON:0002370!2.05e-07!23;UBERON:0000974!2.05e-07!23;UBERON:0004807!2.05e-07!23;UBERON:0005058!2.05e-07!23;UBERON:0003351!2.05e-07!23;UBERON:0009113!2.05e-07!23;UBERON:0003295!2.05e-07!23;UBERON:0009722!2.05e-07!23;UBERON:0005562!2.05e-07!23;UBERON:0007690!2.05e-07!23;UBERON:0000490!2.94e-07!66;UBERON:0003081!3.15e-07!88;UBERON:0002530!3.37e-07!65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.82e-19,48;UBERON:0002405,1.82e-19,48;UBERON:0002390,4.90e-18,45;UBERON:0003061,4.90e-18,45;UBERON:0002384,4.15e-13,46;UBERON:0004177,2.03e-10,29;UBERON:0005057,2.03e-10,29;UBERON:0000077,1.46e-09,35;UBERON:0002371,1.49e-08,16;UBERON:0004119,1.51e-08,118;UBERON:0000925,1.51e-08,118;UBERON:0006595,1.51e-08,118;UBERON:0003408,1.81e-08,24;UBERON:0001007,2.77e-08,116;UBERON:0001555,2.77e-08,116;UBERON:0007026,2.77e-08,116;UBERON:0002370,2.98e-08,23;UBERON:0000974,2.98e-08,23;UBERON:0004807,2.98e-08,23;UBERON:0005058,2.98e-08,23;UBERON:0003351,2.98e-08,23;UBERON:0009113,2.98e-08,23;UBERON:0003295,2.98e-08,23;UBERON:0009722,2.98e-08,23;UBERON:0005562,2.98e-08,23;UBERON:0007690,2.98e-08,23;UBERON:0003081,5.26e-08,87;UBERON:0004921,1.01e-07,114;UBERON:0006562,1.73e-07,24;UBERON:0001557,1.73e-07,24;UBERON:0001042,1.73e-07,24;UBERON:0008814,1.73e-07,24;UBERON:0009145,1.73e-07,24;UBERON:0000490,2.93e-07,66;UBERON:0002530,4.10e-07,65 | |||
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| |||
|short_description=p6@Shisa5 | |||
}} |
Latest revision as of 04:50, 26 September 2015
Short description: | p6@Shisa5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Shisa5_5end |
Coexpression cluster: | MCL_coexpression_mm9:1967 |
Association with transcript: | 154bp_to_ENSMUST00000151141_5end |
EntrezGene: | Shisa5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 4.15e-13 | 46 |
mesenchymal cell | 4.15e-13 | 46 |
motile cell | 3.45e-12 | 54 |
hematopoietic cell | 4.20e-12 | 32 |
hematopoietic oligopotent progenitor cell | 4.20e-12 | 32 |
hematopoietic stem cell | 4.20e-12 | 32 |
hematopoietic multipotent progenitor cell | 4.20e-12 | 32 |
hematopoietic lineage restricted progenitor cell | 1.42e-09 | 25 |
leukocyte | 1.70e-09 | 17 |
nongranular leukocyte | 1.70e-09 | 17 |
lymphoid lineage restricted progenitor cell | 4.47e-08 | 12 |
lymphocyte | 1.66e-07 | 13 |
common lymphoid progenitor | 1.66e-07 | 13 |
T cell | 1.90e-07 | 11 |
pro-T cell | 1.90e-07 | 11 |
mature alpha-beta T cell | 5.37e-07 | 9 |
alpha-beta T cell | 5.37e-07 | 9 |
immature T cell | 5.37e-07 | 9 |
mature T cell | 5.37e-07 | 9 |
immature alpha-beta T cell | 5.37e-07 | 9 |