FFCP PHASE1:Mm9::chr11:96691218..96691265,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:96691218..96691265,-
|short_description=p2@Nfe2l1
|description=CAGE_peak_2_at_Nfe2l1_5end
|association_with_transcript=3bp_to_ENSMUST00000107657_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18023 | |EntrezGene=18023 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q6GTN8 | |UniProt=Q6GTN8 | ||
|association_with_transcript=3bp_to_ENSMUST00000107657_5end | |||
|cluster_id=chr11:96691218..96691265,- | |||
|description=CAGE_peak_2_at_Nfe2l1_5end | |||
|id=chr11:96691218..96691265,- | |||
|ontology_enrichment_celltype=CL:0000221!1.33e-07!44;CL:0000133!1.33e-07!44;CL:0002319!2.11e-07!43;CL:0000055!6.75e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.33e-07,44;CL:0000133,1.33e-07,44;CL:0002319,2.11e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.01e-21!73;UBERON:0005743!9.01e-21!73;UBERON:0000073!2.02e-20!75;UBERON:0001016!2.02e-20!75;UBERON:0004121!9.51e-18!102;UBERON:0000924!9.51e-18!102;UBERON:0006601!9.51e-18!102;UBERON:0001049!1.05e-17!52;UBERON:0005068!1.05e-17!52;UBERON:0006241!1.05e-17!52;UBERON:0007135!1.05e-17!52;UBERON:0000955!1.48e-17!50;UBERON:0006238!1.48e-17!50;UBERON:0002616!3.48e-17!49;UBERON:0000033!1.40e-16!63;UBERON:0002346!2.44e-14!71;UBERON:0003075!2.44e-14!71;UBERON:0007284!2.44e-14!71;UBERON:0003080!1.13e-12!40;UBERON:0004111!2.07e-12!122;UBERON:0002780!4.06e-12!39;UBERON:0001890!4.06e-12!39;UBERON:0006240!4.06e-12!39;UBERON:0003056!1.31e-11!49;UBERON:0000025!1.00e-10!114;UBERON:0002020!8.80e-10!34;UBERON:0000468!5.35e-09!333;UBERON:0002791!5.51e-08!29;UBERON:0003528!5.51e-08!29;UBERON:0001893!5.51e-08!29;UBERON:0000922!6.49e-08!328;UBERON:0007811!6.71e-08!86;UBERON:0000480!9.66e-08!308;UBERON:0000467!9.66e-08!308;UBERON:0000062!2.97e-07!269;UBERON:0002050!3.39e-07!317;UBERON:0005423!3.39e-07!317 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.01e-21,73;UBERON:0001016,2.02e-20,75;UBERON:0000073,2.95e-19,54;UBERON:0004121,9.38e-18,95;UBERON:0000924,9.38e-18,95;UBERON:0006601,9.38e-18,95;UBERON:0001049,1.05e-17,52;UBERON:0005068,1.05e-17,52;UBERON:0006241,1.05e-17,52;UBERON:0007135,1.05e-17,52;UBERON:0010314,2.12e-16,92;UBERON:0000955,1.55e-15,47;UBERON:0006238,1.55e-15,47;UBERON:0002616,3.57e-15,46;UBERON:0002346,1.29e-14,64;UBERON:0003075,1.29e-14,64;UBERON:0007284,1.29e-14,64;UBERON:0010371,9.16e-13,73;UBERON:0003080,1.13e-12,40;UBERON:0004111,2.07e-12,122;UBERON:0002780,4.06e-12,39;UBERON:0001890,4.06e-12,39;UBERON:0006240,4.06e-12,39;UBERON:0003056,1.31e-11,49;UBERON:0000025,1.00e-10,114;UBERON:0002020,8.80e-10,34;UBERON:0003528,5.51e-08,29;UBERON:0002791,5.51e-08,29;UBERON:0001893,5.51e-08,29;UBERON:0005423,5.26e-07,304;UBERON:0000922,9.10e-07,320 | |||
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| ||
|short_description=p2@Nfe2l1 | |||
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Latest revision as of 01:49, 26 September 2015
Short description: | p2@Nfe2l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nfe2l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 3bp_to_ENSMUST00000107657_5end |
EntrezGene: | Nfe2l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.33e-07 | 44 |
neurectodermal cell | 1.33e-07 | 44 |
neural cell | 2.11e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.01e-21 | 73 |
nervous system | 2.02e-20 | 75 |
regional part of nervous system | 2.95e-19 | 54 |
ectoderm-derived structure | 9.38e-18 | 95 |
ectoderm | 9.38e-18 | 95 |
presumptive ectoderm | 9.38e-18 | 95 |
neural tube | 1.05e-17 | 52 |
neural rod | 1.05e-17 | 52 |
future spinal cord | 1.05e-17 | 52 |
neural keel | 1.05e-17 | 52 |
structure with developmental contribution from neural crest | 2.12e-16 | 92 |
brain | 1.55e-15 | 47 |
future brain | 1.55e-15 | 47 |
regional part of brain | 3.57e-15 | 46 |
neurectoderm | 1.29e-14 | 64 |
neural plate | 1.29e-14 | 64 |
presumptive neural plate | 1.29e-14 | 64 |
ecto-epithelium | 9.16e-13 | 73 |
anterior neural tube | 1.13e-12 | 40 |
anatomical conduit | 2.07e-12 | 122 |
regional part of forebrain | 4.06e-12 | 39 |
forebrain | 4.06e-12 | 39 |
future forebrain | 4.06e-12 | 39 |
pre-chordal neural plate | 1.31e-11 | 49 |
tube | 1.00e-10 | 114 |
gray matter | 8.80e-10 | 34 |
brain grey matter | 5.51e-08 | 29 |
regional part of telencephalon | 5.51e-08 | 29 |
telencephalon | 5.51e-08 | 29 |
developing anatomical structure | 5.26e-07 | 304 |
embryo | 9.10e-07 | 320 |