FFCP PHASE1:Mm9::chr14:119498621..119498667,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:119498621..119498667,-
|short_description=p1@Uggt2
|description=CAGE_peak_1_at_Uggt2_5end
|association_with_transcript=0bp_to_ENSMUST00000136924,ENSMUST00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66435 | |EntrezGene=66435 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1354 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q4X2,Q8BKH2 | |UniProt=E9Q4X2,Q8BKH2 | ||
|association_with_transcript=0bp_to_ENSMUST00000136924,ENSMUST00000156203,NM_001081252,uc007uzj.2,uc007uzl.1_5end | |||
|cluster_id=chr14:119498621..119498667,- | |||
|description=CAGE_peak_1_at_Uggt2_5end | |||
|id=chr14:119498621..119498667,- | |||
|ontology_enrichment_celltype=CL:0000393!1.41e-08!39;CL:0000211!1.41e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.31e-08,39;CL:0000211,1.31e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.94e-14!75;UBERON:0001016!4.94e-14!75;UBERON:0004121!1.96e-13!102;UBERON:0000924!1.96e-13!102;UBERON:0006601!1.96e-13!102;UBERON:0001017!2.75e-13!73;UBERON:0005743!2.75e-13!73;UBERON:0002346!9.62e-13!71;UBERON:0003075!9.62e-13!71;UBERON:0007284!9.62e-13!71;UBERON:0000033!3.44e-12!63;UBERON:0003056!3.91e-10!49;UBERON:0001049!9.69e-10!52;UBERON:0005068!9.69e-10!52;UBERON:0006241!9.69e-10!52;UBERON:0007135!9.69e-10!52;UBERON:0000955!1.43e-09!50;UBERON:0006238!1.43e-09!50;UBERON:0000468!1.47e-09!333;UBERON:0002616!3.06e-09!49;UBERON:0003080!1.92e-07!40;UBERON:0000922!3.24e-07!328;UBERON:0002780!3.99e-07!39;UBERON:0001890!3.99e-07!39;UBERON:0006240!3.99e-07!39;UBERON:0002021!4.31e-07!10;UBERON:0000411!4.31e-07!10;UBERON:0001950!4.31e-07!10;UBERON:0002020!7.46e-07!34;UBERON:0000025!8.77e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.35e-14,75;UBERON:0004121,1.32e-13,95;UBERON:0000924,1.32e-13,95;UBERON:0006601,1.32e-13,95;UBERON:0002346,2.26e-13,64;UBERON:0003075,2.26e-13,64;UBERON:0007284,2.26e-13,64;UBERON:0001017,2.44e-13,73;UBERON:0010314,3.36e-12,92;UBERON:0010371,1.88e-11,73;UBERON:0000073,8.87e-11,54;UBERON:0003056,3.58e-10,49;UBERON:0001049,8.91e-10,52;UBERON:0005068,8.91e-10,52;UBERON:0006241,8.91e-10,52;UBERON:0007135,8.91e-10,52;UBERON:0000955,1.30e-08,47;UBERON:0006238,1.30e-08,47;UBERON:0002616,2.72e-08,46;UBERON:0000922,8.92e-08,320;UBERON:0003080,1.81e-07,40;UBERON:0002780,3.77e-07,39;UBERON:0001890,3.77e-07,39;UBERON:0006240,3.77e-07,39;UBERON:0002021,4.07e-07,10;UBERON:0000411,4.07e-07,10;UBERON:0001950,4.07e-07,10;UBERON:0002020,7.07e-07,34;UBERON:0000025,9.57e-07,114 | |||
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| ||
|short_description=p1@Uggt2 | |||
}} | }} |
Latest revision as of 16:25, 25 September 2015
Short description: | p1@Uggt2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Uggt2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1354 |
Association with transcript: | 0bp_to_ENSMUST00000136924, ENSMUST00000156203, NM_001081252, uc007uzj.2, uc007uzl.1_5end |
EntrezGene: | Uggt2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.31e-08 | 39 |
electrically active cell | 1.31e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 4.35e-14 | 75 |
ectoderm-derived structure | 1.32e-13 | 95 |
ectoderm | 1.32e-13 | 95 |
presumptive ectoderm | 1.32e-13 | 95 |
neurectoderm | 2.26e-13 | 64 |
neural plate | 2.26e-13 | 64 |
presumptive neural plate | 2.26e-13 | 64 |
central nervous system | 2.44e-13 | 73 |
structure with developmental contribution from neural crest | 3.36e-12 | 92 |
ecto-epithelium | 1.88e-11 | 73 |
regional part of nervous system | 8.87e-11 | 54 |
pre-chordal neural plate | 3.58e-10 | 49 |
neural tube | 8.91e-10 | 52 |
neural rod | 8.91e-10 | 52 |
future spinal cord | 8.91e-10 | 52 |
neural keel | 8.91e-10 | 52 |
brain | 1.30e-08 | 47 |
future brain | 1.30e-08 | 47 |
regional part of brain | 2.72e-08 | 46 |
embryo | 8.92e-08 | 320 |
anterior neural tube | 1.81e-07 | 40 |
regional part of forebrain | 3.77e-07 | 39 |
forebrain | 3.77e-07 | 39 |
future forebrain | 3.77e-07 | 39 |
occipital lobe | 4.07e-07 | 10 |
visual cortex | 4.07e-07 | 10 |
neocortex | 4.07e-07 | 10 |
gray matter | 7.07e-07 | 34 |
tube | 9.57e-07 | 114 |