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FFCP PHASE1:Mm9::chr18:24688704..24688746,-: Difference between revisions

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(Created page with "{{FFCP |id=chr18:24688704..24688746,- |short_description=p2@Rprd1a |description=CAGE_peak_2_at_Rprd1a_5end |association_with_transcript=0bp_to_ENSMUST00000046206,NM_144861...")
 
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{{FFCP
{{FFCP
|id=chr18:24688704..24688746,-
|DHSsupport=NA
|short_description=p2@Rprd1a
|DPIdataset=NA
|description=CAGE_peak_2_at_Rprd1a_5end
|association_with_transcript=0bp_to_ENSMUST00000046206,NM_144861,uc008egu.1_5end
|EntrezGene=225283
|EntrezGene=225283
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8VDS4
|UniProt=Q8VDS4
|association_with_transcript=0bp_to_ENSMUST00000046206,NM_144861,uc008egu.1_5end
|cluster_id=chr18:24688704..24688746,-
|description=CAGE_peak_2_at_Rprd1a_5end
|id=chr18:24688704..24688746,-
|ontology_enrichment_celltype=CL:0000117!3.48e-09!23;CL:0000337!3.48e-09!23;CL:0000540!9.68e-08!33;CL:0000047!9.68e-08!33;CL:0000031!9.68e-08!33;CL:0000404!9.68e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,3.48e-09,23;CL:0000337,3.48e-09,23;CL:0000540,9.67e-08,33;CL:0000047,9.67e-08,33;CL:0000031,9.67e-08,33;CL:0000404,9.67e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!2.26e-22!86;UBERON:0000033!9.22e-22!63;UBERON:0000153!1.81e-21!94;UBERON:0003056!2.72e-18!49;UBERON:0000955!1.49e-17!50;UBERON:0006238!1.49e-17!50;UBERON:0002616!7.24e-17!49;UBERON:0001049!1.61e-16!52;UBERON:0005068!1.61e-16!52;UBERON:0006241!1.61e-16!52;UBERON:0007135!1.61e-16!52;UBERON:0002346!1.14e-15!71;UBERON:0003075!1.14e-15!71;UBERON:0007284!1.14e-15!71;UBERON:0001017!5.10e-15!73;UBERON:0005743!5.10e-15!73;UBERON:0003080!1.63e-14!40;UBERON:0002780!6.60e-14!39;UBERON:0001890!6.60e-14!39;UBERON:0006240!6.60e-14!39;UBERON:0000073!7.04e-14!75;UBERON:0001016!7.04e-14!75;UBERON:0002020!3.31e-13!34;UBERON:0004121!7.41e-13!102;UBERON:0000924!7.41e-13!102;UBERON:0006601!7.41e-13!102;UBERON:0002791!1.89e-12!29;UBERON:0003528!1.89e-12!29;UBERON:0001893!1.89e-12!29;UBERON:0000956!9.44e-09!21;UBERON:0001869!9.44e-09!21;UBERON:0000203!9.44e-09!21;UBERON:0000468!4.65e-08!333;UBERON:0002021!6.89e-07!10;UBERON:0000411!6.89e-07!10;UBERON:0001950!6.89e-07!10;UBERON:0002619!9.01e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.92e-20,64;UBERON:0003075,7.92e-20,64;UBERON:0007284,7.92e-20,64;UBERON:0003056,2.68e-18,49;UBERON:0010371,4.49e-18,73;UBERON:0000073,7.73e-18,54;UBERON:0010314,1.21e-17,92;UBERON:0001049,1.60e-16,52;UBERON:0005068,1.60e-16,52;UBERON:0006241,1.60e-16,52;UBERON:0007135,1.60e-16,52;UBERON:0004121,1.16e-15,95;UBERON:0000924,1.16e-15,95;UBERON:0006601,1.16e-15,95;UBERON:0000955,1.32e-15,47;UBERON:0006238,1.32e-15,47;UBERON:0001017,4.89e-15,73;UBERON:0002616,6.12e-15,46;UBERON:0003080,1.62e-14,40;UBERON:0002780,6.52e-14,39;UBERON:0001890,6.52e-14,39;UBERON:0006240,6.52e-14,39;UBERON:0001016,6.77e-14,75;UBERON:0002020,3.27e-13,34;UBERON:0003528,1.87e-12,29;UBERON:0002791,1.87e-12,29;UBERON:0001893,1.87e-12,29;UBERON:0000956,9.33e-09,21;UBERON:0001869,9.33e-09,21;UBERON:0000203,9.33e-09,21;UBERON:0002021,6.89e-07,10;UBERON:0000411,6.89e-07,10;UBERON:0001950,6.89e-07,10;UBERON:0002619,8.91e-07,17
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4.14888871117737,4.18079473792944,3.96736587481612,4.71160695571253,2.33306951925227,8.07741107013003,10.7101658349996,12.7089064137382,7.1147150896552,7.77804753376191,4.64975364519832,7.43406952159424,9.50593633030607,8.20287624516886,9.85677837601682,14.9782154912124,13.8254403003775,12.6404448251271,5.0681303822541,9.0385642305048,11.1731907760904,9.84646826171148,9.93406773906325,11.1781768053571,12.1105412283153,14.6401352424814,17.298945110685,16.0313634367576,14.9110557531821,14.3355644044091,17.4146584250538,8.84248496099324,13.9851150625661,8.34338866468124,8.562115434568,7.72758376128762,3.75364950902364,7.50921659495787,4.50173596066038,3.51100472824754,23.1548255472997,20.714635642823,20.0513429703789,19.0757032401493,28.773465830367,24.9279986138601,30.3760125104313,24.7676661773321,30.8136838109259,27.4412965228465,17.9552111320626,15.1629451892392,8.19521307619844,6.80698807791223,6.91723436672342,11.2144540154509,9.55660929546946,14.0103838922448,10.2694147069381,10.8659801058433,8.36481689637791,10.5630751176203,10.9560563739762,10.8202507564229,10.1660780051435,14.7651044297753,12.6313915279892,10.4170979050401,13.1867488257058,10.5983222496766,8.9146005620208,9.05126611412621,9.29901140794552,10.7556348307923,11.0107975085937,10.7460552022429,11.1586063452391,11.0489278803894,10.8643291076689,13.4674145197857,13.7616621024042,13.0025916735744,9.00308294973317,11.1554525653896,10.2240503820005,6.99469618226249,7.71974307869848,7.09074478359384,9.18183993930448,7.0589254118245,5.10109238364927
|phase1_expression=12.3314612270691,3.83872948403297,3.63999391511629,2.11724947914781,6.01074875935617,4.53274034162102,2.80335168714631,4.13194635013044,2.111830832275,1.87251621057595,11.4716038711088,9.6524312384357,6.33442700745461,5.59490575481583,2.6648780945253,3.44207954562704,3.49780939064073,7.72882305127682,10.8320402548534,4.2438965179803,11.9060606211498,3.67376519443276,2.08959831311148,2.23989391910769,3.67054849707472,3.44539178469012,3.01533397311352,2.15471232685889,1.33016393619462,2.26827116783938,1.55211357458713,3.81018404075779,4.30545351309199,0,3.75507105676657,1.82858109894342,3.06254034393554,6.27797446105362,2.3440060335714,7.85285615960697,6.47054636834116,7.5135003345429,10.1957174136542,1.38486499773135,2.02753862439029,2.0190142737785,1.56478268869608,2.39827672018491,0.439372365468944,3.69416808241138,1.81982348112971,0,5.5368259999053,0,4.03312558970957,1.28629718017973,1.14613375975503,2.57836046138721,11.9366711907163,8.99284664762456,15.8457850876545,0.677689064138264,1.77858959222228,0.449949858640699,0.988866362566974,1.4209602298922,2.09720077362883,1.53687322128622,16.5903379693564,15.3906769698127,17.8776217148675,7.9982275633065,11.2642955885323,17.6386750869534,13.5142114135713,12.8690630125403,34.1359231098105,37.9231394113008,39.9376986466233,12.1335384711778,12.1678565991205,14.5855743755893,26.2432019061298,27.5753678915523,33.6156145108982,10.9012576625257,13.3829379951157,15.2847545576746,3.86203585999239,2.56943304363071,1.44932244350839,0.860423876981386,2.03991400112325,4.31762553310254,3.24888208723835,1.79210754838934,7.3031098468511,2.04516387093669,1.55871602761721,3.5333957451034,11.4083170019111,2.56652954828636,7.64415719119937,14.2213340630666,4.76280290224671,5.82727690592727,2.52762222507392,5.36664234679582,7.25026074212081,4.89859058913922,4.16364784238726,2.74018930480927,4.15107895060905,3.46662073271032,4.70354828542819,3.51866455723091,2.96633961281249,3.47038456607788,7.96149496754887,7.44127509758082,6.62524555381181,6.30337829075789,1.86391761218122,36.8903804234549,28.4847521266299,5.10914110417183,0.838705871541442,1.19980546198682,1.01656181658452,32.953940669061,43.0050566649509,26.0104508873629,45.889620530761,53.7002460393694,35.1161795305657,42.3449696606847,6.72139801412087,13.43595282589,36.6447999728828,14.3100462002802,14.4433691688601,12.4147136394075,12.2442248267637,17.9338733224501,17.6894897793452,14.3487366719032,16.9600121453109,16.815719098036,11.6406716183735,12.8592134514117,8.97350733236139,7.01426343768239,6.39508673218875,4.87553033131033,5.96768195583036,12.7381930763836,0.702213187313235,1.80143534980301,1.98914449576915,12.4275463521301,9.85009451920604,11.1638478105829,13.7311946639422,12.3961466000864,8.33042409591843,15.8123082430277,10.4626626545851,13.3112490298573,11.5191894939436,12.3125598059321,9.97146357414026,10.9649990568999,14.9294078397914,13.4206418760372,43.5300193527743,23.2564423977183,3.63460661282178,2.3800550999719,11.3042772783674,9.28946687441754,7.7320476793256,6.25218926332362,5.78182913996663,4.94586627892654,3.32170343081158,3.12928013975621,4.27269854960458,5.57078121715222,4.874102177978,3.59527763461689,2.59365659849633,2.38969527905241,7.58671603812327,13.0243304375091,12.3978509240388,9.36796108088446,9.50367187121366,11.3620028222316,8.47369597465048,8.70899873079653,8.00693511991011,6.16985819609003,3.55743152504579,4.17112764290235,4.52085688760367,3.82265591054251,4.05720242777006,2.894125917029,4.32863948028414,2.01387296215567,2.2698931748505,1.37280706594041,8.62609239164127,1.86070473834252,4.05648975048929,3.03094653536534,3.76734568396016,2.8946611281802,6.28160846566456,13.8328730592454,8.14824882210129,9.33597971763535,8.91822943496308,7.87279409976534,4.76087281772027,4.68320754858717,6.9359463406724,7.30833475840957,7.17546458958692,7.04612253277673,7.08008425650172,8.38964539772767,0,1.08781136763742,3.93411418415229,3.31124095565679,32.2706685875462,37.8593747692816,2.95082901678016,10.856249869788,7.88770548540642,7.80877488593277,7.53981892064796,7.88597033243422,6.46116154838943,10.4738316391868,8.50102473517278,7.89090816360542,6.7198922250909,43.0570564005221,8.37446502728785,6.05423052468668,7.65568708961808,7.25868541079156,2.65490276679926,8.98288353773431,10.2790009368015,5.46954731292105,3.2483208216885,7.68587869859819,6.20227903603731,7.27067458955011,8.19943970284859,4.42451461110142,14.7586052004998,7.21948802737308,17.0219802876894,13.324520958317,7.76152102696527,9.21649250635847,11.8817956540323,10.8804978737263,11.1893334009442,4.26250928760439,4.69343416127421,2.33015277950202,5.51320995137405,7.4198813823666,8.07322133479528,7.72005439080395,5.49112782414428,9.35603128546849,3.20628920292836,35.6016579860179,3.93003025835061,7.42992724667601,7.03739204004904,3.39063222608444,4.78429797023588,5.26189798375002,2.20971958992012,2.51912614182584,3.17859939750175,2.86401185404534,12.9697757368265,9.75933442208874,5.18425635944646,3.76358932826044,4.14888871117737,4.18079473792944,3.96736587481612,4.71160695571253,2.33306951925227,8.07741107013003,10.7101658349996,12.7089064137382,7.1147150896552,7.77804753376191,4.64975364519832,7.43406952159424,9.50593633030607,8.20287624516886,9.85677837601682,14.9782154912124,13.8254403003775,12.6404448251271,5.0681303822541,9.0385642305048,11.1731907760904,9.84646826171148,9.93406773906325,11.1781768053571,12.1105412283153,14.6401352424814,17.298945110685,16.0313634367576,14.9110557531821,14.3355644044091,17.4146584250538,8.84248496099324,13.9851150625661,8.34338866468124,8.562115434568,7.72758376128762,3.75364950902364,7.50921659495787,4.50173596066038,3.51100472824754,23.1548255472997,20.714635642823,20.0513429703789,19.0757032401493,28.773465830367,24.9279986138601,30.3760125104313,24.7676661773321,30.8136838109259,27.4412965228465,17.9552111320626,15.1629451892392,8.19521307619844,6.80698807791223,6.91723436672342,11.2144540154509,9.55660929546946,14.0103838922448,10.2694147069381,10.8659801058433,8.36481689637791,10.5630751176203,10.9560563739762,10.8202507564229,10.1660780051435,14.7651044297753,12.6313915279892,10.4170979050401,13.1867488257058,10.5983222496766,8.9146005620208,9.05126611412621,9.29901140794552,10.7556348307923,11.0107975085937,10.7460552022429,11.1586063452391,11.0489278803894,10.8643291076689,13.4674145197857,13.7616621024042,13.0025916735744,9.00308294973317,11.1554525653896,10.2240503820005,6.99469618226249,7.71974307869848,7.09074478359384,9.18183993930448,7.0589254118245,5.10109238364927
|short_description=p2@Rprd1a
}}
}}

Latest revision as of 02:54, 27 September 2015

Short description:p2@Rprd1a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rprd1a_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000046206, NM_144861, uc008egu.1_5end
EntrezGene:Rprd1a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rprd1a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E611.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F19.65
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.33
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.59
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.44
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.73
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.83
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.24
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.67
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.67
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H37.85
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G96.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H27.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H410.20
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.03
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.54
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C311.94
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C715.85
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D516.59
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F515.39
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D917.88
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.26
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.64
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F213.51
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D612.87
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D334.14
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F337.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D739.94
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.17
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.59
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E426.24
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E527.58
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I633.62
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.90
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.38
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.28
Mouse Schwann, donor1.CNhs12507.11728-123D93.86
Mouse Schwann, donor2.CNhs12573.11746-123F92.57
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.53
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.83
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.37
accessory axillary lymph node, adult.CNhs10475.1063-29H97.25
adrenal gland, adult.CNhs10508.49-24D74.90
adrenal gland, embryo E14.CNhs11038.406-44C54.16
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I14.15
adrenal gland, embryo E18.CNhs11026.1262-18F53.47
adrenal gland, neonate N00.CNhs11191.1311-23C14.70
adrenal gland, neonate N25.CNhs11223.1377-27I33.52
amnion, adult pregnant day17.5.CNhs10488.583-22A82.97
aorta, adult.CNhs10498.46-23H13.47
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F57.44
bone (os femoris), neonate N16.CNhs11225.1525-43A66.63
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B236.89
cerebellum, neonate N30.CNhs11135.1395-42I228.48
colon, adult.CNhs10468.36-18H75.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A432.95
corpus striatum, adult.CNhs10487.19-21D843.01
corpus striatum, neonate N00.CNhs11226.630-43F126.01
cortex, adult.CNhs10473.12-14D545.89
cortex, neonate N30.CNhs11107.1392-42F253.70
diencephalon, adult.CNhs10482.20-12F235.12
diencephalon, neonate N30.CNhs11201.1388-42B242.34
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.72
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A213.44
epididymis, adult.CNhs10490.58-23B236.64
eyeball, adult.CNhs10484.31-12G414.31
eyeball, embryo E12.CNhs11016.345-16C614.44
eyeball, embryo E14.CNhs10521.399-16E212.41
eyeball, embryo E15.CNhs10593.426-16C912.24
eyeball, embryo E17.CNhs11023.1261-18D417.93
eyeball, neonate N00.CNhs11207.633-15C617.69
eyeball, neonate N01.CNhs11140.1532-43E714.35
eyeball, neonate N02.CNhs11205.1551-44G816.96
eyeball, neonate N16.CNhs11188.777-19A216.82
forelimb, embryo E11.CNhs10596.335-25E211.64
forelimb, embryo E12.CNhs10600.359-14H212.86
forelimb, embryo E13.CNhs10589.384-1E28.97
forelimb, embryo E14.CNhs10577.413-26A87.01
forelimb, embryo E15.CNhs11007.437-20E76.40
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B55.97
gonad, embryo E13.CNhs11044.1564-45I612.74
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E912.43
heart, embryo E12.CNhs11015.353-12F59.85
heart, embryo E13.CNhs11013.376-3I911.16
heart, embryo E14.CNhs10597.403-26D413.73
heart, embryo E15.CNhs11017.431-16C812.40
heart, embryo E16.CNhs11021.457-17C68.33
heart, embryo E17.CNhs11025.479-18E515.81
heart, embryo E18.CNhs11030.1283-20G310.46
heart, neonate N00.CNhs11213.639-21E313.31
heart, neonate N03.CNhs11221.1349-25I211.52
heart, neonate N10.CNhs11118.749-24G112.31
heart, neonate N16.CNhs11209.782-15G19.97
heart, neonate N20.CNhs11127.821-26I610.96
heart, neonate N25.CNhs11196.1351-25D314.93
heart, neonate N30.CNhs11202.1390-42D213.42
hippocampus, adult.CNhs10478.13-16E843.53
hippocampus, neonate N00.CNhs11228.627-43G123.26
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I511.30
intestine, embryo E13.CNhs11010.381-16D59.29
intestine, embryo E15.CNhs10602.976-16D87.73
intestine, embryo E16.CNhs10585.463-22H46.25
intestine, embryo E17.CNhs10582.482-18D35.78
intestine, embryo E18.CNhs10526.1289-20F74.95
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E93.13
intestine, neonate N06.CNhs11102.688-20B84.27
intestine, neonate N07.CNhs11095.720-20F25.57
intestine, neonate N10.CNhs11098.755-23A54.87
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I97.59
kidney, embryo E15.CNhs10997.434-16F813.02
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I29.37
kidney, embryo E18.CNhs11001.1288-20C79.50
kidney, neonate N00.CNhs11214.646-21G711.36
kidney, neonate N10.CNhs11206.758-6D58.47
kidney, neonate N20.CNhs11113.832-19I18.71
kidney, neonate N25.CNhs11122.1353-25F38.01
kidney, neonate N30.CNhs11203.1385-42H16.17
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F84.17
liver, embryo E13.CNhs10524.378-3H64.52
liver, embryo E14.CNhs10594.409-16E13.82
liver, embryo E15.CNhs10520.433-16D74.06
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H13.77
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B16.28
lung, embryo E12.CNhs10522.354-16G213.83
lung, embryo E14.CNhs10604.404-26F88.15
lung, embryo E15.CNhs11020.432-17C59.34
lung, embryo E16.CNhs10998.458-17B68.92
lung, embryo E17.CNhs10605.480-44A67.87
lung, embryo E18.CNhs10583.1287-20I64.76
lung, neonate N00.CNhs11224.640-42C64.68
lung, neonate N06.CNhs11212.683-20E56.94
lung, neonate N07.CNhs11111.715-19A37.31
lung, neonate N10.CNhs11219.750-23E67.18
lung, neonate N20.CNhs11109.822-18A47.05
lung, neonate N25.CNhs11119.1359-25C77.08
lung, neonate N30.CNhs11133.1394-42H28.39
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C232.27
medulla oblongata, neonate N30.CNhs11200.1396-42A337.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.95
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.86
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.81
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.54
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.89
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.47
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.89
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.72
olfactory brain, adult.CNhs10489.18-22I943.06
ovary, adult.CNhs10507.91-2I78.37
ovary, embryo E18.CNhs11040.505-44H76.05
ovary, neonate N00.CNhs11217.1299-22I47.66
oviduct, adult pregnant day01.CNhs10500.988-6G67.26
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F48.98
pancreas, embryo E15.CNhs11042.1556-45F210.28
pancreas, embryo E16.CNhs11003.460-26E55.47
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I77.69
pancreas, neonate N00.CNhs11105.645-26G96.20
pancreas, neonate N01.CNhs11138.1531-43D77.27
pancreas, neonate N02.CNhs11139.1539-43D88.20
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E214.76
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G817.02
pituitary gland, embryo E12.CNhs11018.346-16E613.32
pituitary gland, embryo E13.CNhs11009.370-44C77.76
pituitary gland, embryo E14.CNhs11037.398-44A59.22
pituitary gland, embryo E15.CNhs10592.427-16B911.88
pituitary gland, embryo E16.CNhs11036.449-43F610.88
pituitary gland, embryo E17.CNhs11039.1265-44F511.19
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I74.69
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F85.51
skin, adult.CNhs10492.30-1C37.42
skin, neonate N00.CNhs11124.650-25G48.07
skin, neonate N03.CNhs11215.662-22H37.72
skin, neonate N06.CNhs11097.693-20I55.49
skin, neonate N10.CNhs11108.762-6C49.36
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C935.60
spleen, adult.CNhs10465.25-2G23.93
spleen, embryo E16.CNhs11035.461-43C17.43
spleen, embryo E18.CNhs11011.1271-21F27.04
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H14.78
spleen, neonate N25.CNhs11099.1354-25G35.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.18
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E312.97
stomach, embryo E15.CNhs10603.1252-16G89.76
stomach, embryo E16.CNhs11022.459-17D45.18
stomach, embryo E17.CNhs11006.1035-18D53.76
stomach, embryo E18.CNhs10999.1286-20C64.15
stomach, neonate N03.CNhs11193.1340-24B84.18
stomach, neonate N07.CNhs11210.718-18A93.97
stomach, neonate N25.CNhs11104.1355-25E44.71
stomach, neonate N30.CNhs11134.1386-42I12.33
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G510.71
testis, embryo E13.CNhs11031.389-23F512.71
testis, embryo E15.CNhs11034.443-27C57.11
testis, embryo E16.CNhs11033.470-26G57.78
testis, embryo E17.CNhs11029.486-18I54.65
testis, embryo E18.CNhs11027.503-18G57.43
testis, neonate N00.CNhs11189.1300-22B79.51
testis, neonate N07.CNhs11222.726-26I48.20
testis, neonate N10.CNhs11204.763-44D99.86
testis, neonate N20.CNhs11110.839-18H314.98
testis, neonate N30.CNhs11130.1391-42E213.83
thymus, adult.CNhs10471.38-12B512.64
thymus, embryo E14.CNhs11041.402-44I45.07
thymus, embryo E15.CNhs11005.430-45I29.04
thymus, embryo E16.CNhs11002.456-26C511.17
thymus, embryo E17.CNhs10581.478-18C19.85
thymus, embryo E18.CNhs10595.1273-19G49.93
thymus, neonate N02.CNhs11181.1541-43F811.18
thymus, neonate N03.CNhs11137.2104-43C712.11
thymus, neonate N06.CNhs11197.681-26C414.64
thymus, neonate N07.CNhs11211.713-19D317.30
thymus, neonate N10.CNhs11194.748-24E416.03
thymus, neonate N20.CNhs11186.820-7A214.91
thymus, neonate N25.CNhs11125.1362-25G714.34
thymus, neonate N30.CNhs11132.1393-42G217.41
tongue, adult.CNhs10499.32-1B48.84
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H313.99
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F78.34
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.56
urinary bladder, adult.CNhs10481.879-12E47.73
uterus, adult pregnant day19.CNhs10497.590-15F53.75
uterus, adult.CNhs10509.92-27E57.51
vagina, adult.CNhs10502.89-27D54.50
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.15
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A220.71
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.05
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D719.08
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A428.77
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.93
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A630.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A724.77
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A830.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A927.44
whole body, embryo E11.CNhs11014.324-5I817.96
whole body, embryo E12.CNhs10587.857-27C915.16
whole body, embryo E13.CNhs10512.372-23H28.20
whole body, embryo E14.5.CNhs10578.420-27D26.81
whole body, embryo E14.CNhs10519.395-14B16.92
whole body, embryo E16.CNhs10514.453-14F211.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.27
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.87
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.36
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.56
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.96
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.82
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.42
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.60
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.91
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.30
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.75
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.16
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.86
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G513.47
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.76
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.16
whole body, embryo E17.5.CNhs10513.490-9F910.22
whole body, embryo E17.CNhs10517.475-3I56.99
whole body, embryo E18.CNhs10516.493-3B37.72
whole body, neonate N00.CNhs10525.657-19C27.09
whole body, neonate N01.CNhs10576.659-23C69.18
whole body, neonate N06.CNhs10515.692-21D17.06
whole body, neonate N10.CNhs10518.761-6B45.10





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.48e-0923
neuroblast (sensu Vertebrata)3.48e-0923
neuron9.67e-0833
neuronal stem cell9.67e-0833
neuroblast9.67e-0833
electrically signaling cell9.67e-0833

Uber anatomy
Ontology termp-valuen
neurectoderm7.92e-2064
neural plate7.92e-2064
presumptive neural plate7.92e-2064
pre-chordal neural plate2.68e-1849
ecto-epithelium4.49e-1873
regional part of nervous system7.73e-1854
structure with developmental contribution from neural crest1.21e-1792
neural tube1.60e-1652
neural rod1.60e-1652
future spinal cord1.60e-1652
neural keel1.60e-1652
ectoderm-derived structure1.16e-1595
ectoderm1.16e-1595
presumptive ectoderm1.16e-1595
brain1.32e-1547
future brain1.32e-1547
central nervous system4.89e-1573
regional part of brain6.12e-1546
anterior neural tube1.62e-1440
regional part of forebrain6.52e-1439
forebrain6.52e-1439
future forebrain6.52e-1439
nervous system6.77e-1475
gray matter3.27e-1334
brain grey matter1.87e-1229
regional part of telencephalon1.87e-1229
telencephalon1.87e-1229
cerebral cortex9.33e-0921
cerebral hemisphere9.33e-0921
pallium9.33e-0921
occipital lobe6.89e-0710
visual cortex6.89e-0710
neocortex6.89e-0710
regional part of cerebral cortex8.91e-0717
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