FFCP PHASE1:Mm9::chr18:25638012..25638023,-: Difference between revisions
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|id=chr18:25638012..25638023,-
|short_description=p@chr18:25638012..25638023,-
|description=CAGE_peak_at_chr18:25638012..25638023,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:25638012..25638023,- | |||
|description=CAGE_peak_at_chr18:25638012..25638023,- | |||
|id=chr18:25638012..25638023,- | |||
|ontology_enrichment_celltype=CL:0000117!9.87e-12!23;CL:0000337!9.87e-12!23;CL:0000540!1.65e-09!33;CL:0000047!1.65e-09!33;CL:0000031!1.65e-09!33;CL:0000404!1.65e-09!33;CL:0000393!2.16e-07!39;CL:0000211!2.16e-07!39 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!8.83e-27!71;UBERON:0003075!8.83e-27!71;UBERON:0007284!8.83e-27!71;UBERON:0001017!2.81e-26!73;UBERON:0005743!2.81e-26!73;UBERON:0001049!6.14e-26!52;UBERON:0005068!6.14e-26!52;UBERON:0006241!6.14e-26!52;UBERON:0007135!6.14e-26!52;UBERON:0000073!2.80e-25!75;UBERON:0001016!2.80e-25!75;UBERON:0002020!1.95e-24!34;UBERON:0004121!3.89e-24!102;UBERON:0000924!3.89e-24!102;UBERON:0006601!3.89e-24!102;UBERON:0000033!3.26e-23!63;UBERON:0000955!3.90e-22!50;UBERON:0006238!3.90e-22!50;UBERON:0003056!1.93e-21!49;UBERON:0002616!7.67e-21!49;UBERON:0002791!1.11e-20!29;UBERON:0003528!1.11e-20!29;UBERON:0001893!1.11e-20!29;UBERON:0003080!2.57e-18!40;UBERON:0002021!1.27e-17!10;UBERON:0000411!1.27e-17!10;UBERON:0001950!1.27e-17!10;UBERON:0000956!1.91e-17!21;UBERON:0001869!1.91e-17!21;UBERON:0000203!1.91e-17!21;UBERON:0002780!4.11e-17!39;UBERON:0001890!4.11e-17!39;UBERON:0006240!4.11e-17!39;UBERON:0002619!3.13e-15!17;UBERON:0007811!2.27e-14!86;UBERON:0000153!2.47e-12!94;UBERON:0003076!3.29e-08!12;UBERON:0003057!3.29e-08!12;UBERON:0000025!1.32e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.19e-59,10;UBERON:0000411,3.19e-59,10;UBERON:0001950,3.19e-59,10;UBERON:0002619,1.21e-34,17;UBERON:0000956,6.08e-28,21;UBERON:0001869,6.08e-28,21;UBERON:0000203,6.08e-28,21;UBERON:0003528,4.57e-20,29;UBERON:0002791,4.57e-20,29;UBERON:0001893,4.57e-20,29;UBERON:0002020,5.11e-17,34;UBERON:0000955,6.22e-15,47;UBERON:0006238,6.22e-15,47;UBERON:0002780,9.56e-15,39;UBERON:0001890,9.56e-15,39;UBERON:0006240,9.56e-15,39;UBERON:0003080,2.33e-14,40;UBERON:0002616,2.17e-12,46;UBERON:0003056,1.39e-11,49;UBERON:0001017,2.61e-11,73;UBERON:0001016,5.55e-11,75;UBERON:0001049,7.17e-11,52;UBERON:0005068,7.17e-11,52;UBERON:0006241,7.17e-11,52;UBERON:0007135,7.17e-11,52;UBERON:0000073,1.94e-10,54;UBERON:0002346,1.11e-08,64;UBERON:0003075,1.11e-08,64;UBERON:0007284,1.11e-08,64;UBERON:0001851,1.47e-08,1;UBERON:0005889,1.47e-08,1;UBERON:0004121,1.86e-08,95;UBERON:0000924,1.86e-08,95;UBERON:0006601,1.86e-08,95;UBERON:0010371,1.67e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0,0,0.441737081903227,0,0.191690942036473,0,0,0,0.153606533256243,0.263772575460388,0.365950574409639,0,0.558365998002762,0,0.763991238884051,0.294628585473668,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.599162557619291,0,0.251308704225729,0.173824320192276,1.53429274398198,0,0.648965052271031,0,0,0,0,0,0,0,0.452114453507145,0.204109497453984,0.512454881139399,0.281105173679186,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0.430846795465598,0,0,0,0.404810701674894,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,1.38097570952153,2.86447756719698,4.98374228796694,1.37016503954128,2.2661816921691,3.37511250115903,3.15224842256954,0.453142408984205,2.5888015587591,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0,0,0.441737081903227,0,0.191690942036473,0,0,0,0.153606533256243,0.263772575460388,0.365950574409639,0,0.558365998002762,0,0.763991238884051,0.294628585473668,0.284743361598206,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.599162557619291,0,0.251308704225729,0.173824320192276,1.53429274398198,0,0.648965052271031,0,0,0,0,0,0,0,0.452114453507145,0.204109497453984,0.512454881139399,0.281105173679186,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0.430846795465598,0,0,0,0.404810701674894,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,1.38097570952153,2.86447756719698,4.98374228796694,1.37016503954128,2.2661816921691,3.37511250115903,3.15224842256954,0.453142408984205,2.5888015587591,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:25638012..25638023,- | |||
}} | }} |
Latest revision as of 14:52, 5 August 2015
Short description: | p@chr18:25638012..25638023, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:25638012..25638023, - |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.19e-59 | 10 |
visual cortex | 3.19e-59 | 10 |
neocortex | 3.19e-59 | 10 |
regional part of cerebral cortex | 1.21e-34 | 17 |
cerebral cortex | 6.08e-28 | 21 |
cerebral hemisphere | 6.08e-28 | 21 |
pallium | 6.08e-28 | 21 |
brain grey matter | 4.57e-20 | 29 |
regional part of telencephalon | 4.57e-20 | 29 |
telencephalon | 4.57e-20 | 29 |
gray matter | 5.11e-17 | 34 |
brain | 6.22e-15 | 47 |
future brain | 6.22e-15 | 47 |
regional part of forebrain | 9.56e-15 | 39 |
forebrain | 9.56e-15 | 39 |
future forebrain | 9.56e-15 | 39 |
anterior neural tube | 2.33e-14 | 40 |
regional part of brain | 2.17e-12 | 46 |
pre-chordal neural plate | 1.39e-11 | 49 |
central nervous system | 2.61e-11 | 73 |
nervous system | 5.55e-11 | 75 |
neural tube | 7.17e-11 | 52 |
neural rod | 7.17e-11 | 52 |
future spinal cord | 7.17e-11 | 52 |
neural keel | 7.17e-11 | 52 |
regional part of nervous system | 1.94e-10 | 54 |
neurectoderm | 1.11e-08 | 64 |
neural plate | 1.11e-08 | 64 |
presumptive neural plate | 1.11e-08 | 64 |
cortex | 1.47e-08 | 1 |
zygote cortex | 1.47e-08 | 1 |
ectoderm-derived structure | 1.86e-08 | 95 |
ectoderm | 1.86e-08 | 95 |
presumptive ectoderm | 1.86e-08 | 95 |
ecto-epithelium | 1.67e-07 | 73 |