FFCP PHASE1:Mm9::chr19:5424822..5424845,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:5424822..5424845,-
|short_description=p3@Drap1
|description=CAGE_peak_3_at_Drap1_5end
|association_with_transcript=-35bp_to_ENSMUST00000126908_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66556 | |EntrezGene=66556 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1420 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-35bp_to_ENSMUST00000126908_5end | |||
|cluster_id=chr19:5424822..5424845,- | |||
|description=CAGE_peak_3_at_Drap1_5end | |||
|id=chr19:5424822..5424845,- | |||
|ontology_enrichment_celltype=CL:0000055!8.41e-14!50;CL:0000117!1.68e-12!23;CL:0000337!1.68e-12!23;CL:0002319!6.38e-12!43;CL:0000221!6.67e-12!44;CL:0000133!6.67e-12!44;CL:0000393!1.38e-09!39;CL:0000211!1.38e-09!39;CL:0002321!4.84e-09!70;CL:0000220!4.84e-09!70;CL:0000540!3.25e-08!33;CL:0000047!3.25e-08!33;CL:0000031!3.25e-08!33;CL:0000404!3.25e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.66e-12,23;CL:0000337,1.66e-12,23;CL:0002319,6.32e-12,43;CL:0000221,6.60e-12,44;CL:0000133,6.60e-12,44;CL:0000393,1.37e-09,39;CL:0000211,1.37e-09,39;CL:0002321,5.68e-09,70;CL:0000540,3.23e-08,33;CL:0000047,3.23e-08,33;CL:0000031,3.23e-08,33;CL:0000404,3.23e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.10e-20!73;UBERON:0005743!3.10e-20!73;UBERON:0000073!8.35e-20!75;UBERON:0001016!8.35e-20!75;UBERON:0001049!1.13e-17!52;UBERON:0005068!1.13e-17!52;UBERON:0006241!1.13e-17!52;UBERON:0007135!1.13e-17!52;UBERON:0000955!5.75e-17!50;UBERON:0006238!5.75e-17!50;UBERON:0002616!2.17e-16!49;UBERON:0002020!9.30e-15!34;UBERON:0004121!4.13e-14!102;UBERON:0000924!4.13e-14!102;UBERON:0006601!4.13e-14!102;UBERON:0000033!3.60e-13!63;UBERON:0002346!6.15e-13!71;UBERON:0003075!6.15e-13!71;UBERON:0007284!6.15e-13!71;UBERON:0003080!1.98e-12!40;UBERON:0002791!2.41e-12!29;UBERON:0003528!2.41e-12!29;UBERON:0001893!2.41e-12!29;UBERON:0002780!4.84e-12!39;UBERON:0001890!4.84e-12!39;UBERON:0006240!4.84e-12!39;UBERON:0003056!1.94e-09!49;UBERON:0007811!2.53e-08!86;UBERON:0000956!4.19e-08!21;UBERON:0001869!4.19e-08!21;UBERON:0000203!4.19e-08!21;UBERON:0000153!6.13e-08!94;UBERON:0000025!4.96e-07!114;UBERON:0004111!5.77e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.04e-20,73;UBERON:0001016,8.20e-20,75;UBERON:0000073,6.27e-19,54;UBERON:0001049,1.11e-17,52;UBERON:0005068,1.11e-17,52;UBERON:0006241,1.11e-17,52;UBERON:0007135,1.11e-17,52;UBERON:0000955,2.71e-15,47;UBERON:0006238,2.71e-15,47;UBERON:0010314,4.96e-15,92;UBERON:0002020,9.18e-15,34;UBERON:0002616,9.87e-15,46;UBERON:0004121,2.20e-14,95;UBERON:0000924,2.20e-14,95;UBERON:0006601,2.20e-14,95;UBERON:0002346,1.58e-13,64;UBERON:0003075,1.58e-13,64;UBERON:0007284,1.58e-13,64;UBERON:0003080,1.96e-12,40;UBERON:0003528,2.38e-12,29;UBERON:0002791,2.38e-12,29;UBERON:0001893,2.38e-12,29;UBERON:0010371,4.56e-12,73;UBERON:0002780,4.79e-12,39;UBERON:0001890,4.79e-12,39;UBERON:0006240,4.79e-12,39;UBERON:0003056,1.92e-09,49;UBERON:0000956,4.17e-08,21;UBERON:0001869,4.17e-08,21;UBERON:0000203,4.17e-08,21;UBERON:0000025,5.09e-07,114;UBERON:0004111,5.89e-07,122 | |||
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| ||
|short_description=p3@Drap1 | |||
}} | }} |
Latest revision as of 23:28, 25 September 2015
Short description: | p3@Drap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Drap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1420 |
Association with transcript: | -35bp_to_ENSMUST00000126908_5end |
EntrezGene: | Drap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.66e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.66e-12 | 23 |
neural cell | 6.32e-12 | 43 |
ectodermal cell | 6.60e-12 | 44 |
neurectodermal cell | 6.60e-12 | 44 |
electrically responsive cell | 1.37e-09 | 39 |
electrically active cell | 1.37e-09 | 39 |
embryonic cell | 5.68e-09 | 70 |
neuron | 3.23e-08 | 33 |
neuronal stem cell | 3.23e-08 | 33 |
neuroblast | 3.23e-08 | 33 |
electrically signaling cell | 3.23e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.04e-20 | 73 |
nervous system | 8.20e-20 | 75 |
regional part of nervous system | 6.27e-19 | 54 |
neural tube | 1.11e-17 | 52 |
neural rod | 1.11e-17 | 52 |
future spinal cord | 1.11e-17 | 52 |
neural keel | 1.11e-17 | 52 |
brain | 2.71e-15 | 47 |
future brain | 2.71e-15 | 47 |
structure with developmental contribution from neural crest | 4.96e-15 | 92 |
gray matter | 9.18e-15 | 34 |
regional part of brain | 9.87e-15 | 46 |
ectoderm-derived structure | 2.20e-14 | 95 |
ectoderm | 2.20e-14 | 95 |
presumptive ectoderm | 2.20e-14 | 95 |
neurectoderm | 1.58e-13 | 64 |
neural plate | 1.58e-13 | 64 |
presumptive neural plate | 1.58e-13 | 64 |
anterior neural tube | 1.96e-12 | 40 |
brain grey matter | 2.38e-12 | 29 |
regional part of telencephalon | 2.38e-12 | 29 |
telencephalon | 2.38e-12 | 29 |
ecto-epithelium | 4.56e-12 | 73 |
regional part of forebrain | 4.79e-12 | 39 |
forebrain | 4.79e-12 | 39 |
future forebrain | 4.79e-12 | 39 |
pre-chordal neural plate | 1.92e-09 | 49 |
cerebral cortex | 4.17e-08 | 21 |
cerebral hemisphere | 4.17e-08 | 21 |
pallium | 4.17e-08 | 21 |
tube | 5.09e-07 | 114 |
anatomical conduit | 5.89e-07 | 122 |