FFCP PHASE1:Mm9::chr19:5468487..5468506,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:5468487..5468506,-
|short_description=p1@Ctsw
|description=CAGE_peak_1_at_Ctsw_5end
|association_with_transcript=0bp_to_ENSMUST00000025844,NM_009985,uc008...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=13041 | |EntrezGene=13041 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=187 | |||
|TSSclassifier=NA | |||
|UniProt=P56203,Q8C2M0 | |UniProt=P56203,Q8C2M0 | ||
|association_with_transcript=0bp_to_ENSMUST00000025844,NM_009985,uc008gdk.2_5end | |||
|cluster_id=chr19:5468487..5468506,- | |||
|description=CAGE_peak_1_at_Ctsw_5end | |||
|id=chr19:5468487..5468506,- | |||
|ontology_enrichment_celltype=CL:0000084!5.13e-08!11;CL:0000827!5.13e-08!11;CL:0000838!8.28e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,3.44e-09,11;CL:0000827,3.44e-09,11;CL:0000838,5.75e-08,12;CL:0000791,1.41e-07,9;CL:0000789,1.41e-07,9;CL:0002420,1.41e-07,9;CL:0002419,1.41e-07,9;CL:0000790,1.41e-07,9;CL:0000542,5.97e-07,13;CL:0000051,5.97e-07,13;CL:0000624,9.34e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.75e-11!29;UBERON:0001004!1.52e-10!42;UBERON:0004119!1.63e-10!130;UBERON:0000925!1.63e-10!130;UBERON:0006595!1.63e-10!130;UBERON:0001007!3.46e-10!128;UBERON:0001555!3.46e-10!128;UBERON:0007026!3.46e-10!128;UBERON:0000065!4.00e-10!41;UBERON:0000072!7.65e-10!27;UBERON:0004921!1.83e-09!126;UBERON:0004185!1.83e-09!126;UBERON:0002193!2.58e-09!48;UBERON:0003408!6.56e-09!24;UBERON:0002370!1.76e-08!23;UBERON:0000974!1.76e-08!23;UBERON:0004807!1.76e-08!23;UBERON:0005058!1.76e-08!23;UBERON:0003351!1.76e-08!23;UBERON:0009113!1.76e-08!23;UBERON:0003295!1.76e-08!23;UBERON:0009722!1.76e-08!23;UBERON:0005562!1.76e-08!23;UBERON:0007690!1.76e-08!23;UBERON:0006562!4.39e-08!24;UBERON:0001557!4.39e-08!24;UBERON:0001042!4.39e-08!24;UBERON:0008814!4.39e-08!24;UBERON:0009145!4.39e-08!24;UBERON:0000077!4.85e-08!97;UBERON:0002390!5.51e-08!45;UBERON:0003061!5.51e-08!45;UBERON:0001041!1.17e-07!92;UBERON:0005057!2.00e-07!51;UBERON:0002405!2.23e-07!70;UBERON:0000063!5.54e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.21e-14,29;UBERON:0005057,5.21e-14,29;UBERON:0004119,2.25e-12,118;UBERON:0000925,2.25e-12,118;UBERON:0006595,2.25e-12,118;UBERON:0000077,2.61e-12,35;UBERON:0000072,2.73e-12,27;UBERON:0001007,2.76e-12,116;UBERON:0001555,2.76e-12,116;UBERON:0007026,2.76e-12,116;UBERON:0002193,3.68e-12,48;UBERON:0002405,3.68e-12,48;UBERON:0001004,1.08e-11,42;UBERON:0003408,1.51e-11,24;UBERON:0004921,2.10e-11,114;UBERON:0000065,3.36e-11,41;UBERON:0002370,4.96e-11,23;UBERON:0000974,4.96e-11,23;UBERON:0004807,4.96e-11,23;UBERON:0005058,4.96e-11,23;UBERON:0003351,4.96e-11,23;UBERON:0009113,4.96e-11,23;UBERON:0003295,4.96e-11,23;UBERON:0009722,4.96e-11,23;UBERON:0005562,4.96e-11,23;UBERON:0007690,4.96e-11,23;UBERON:0002390,1.64e-10,45;UBERON:0003061,1.64e-10,45;UBERON:0006562,3.67e-10,24;UBERON:0001557,3.67e-10,24;UBERON:0001042,3.67e-10,24;UBERON:0008814,3.67e-10,24;UBERON:0009145,3.67e-10,24;UBERON:0001041,1.71e-09,80 | |||
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| ||
|short_description=p1@Ctsw | |||
}} | }} |
Latest revision as of 23:33, 25 September 2015
Short description: | p1@Ctsw |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ctsw_5end |
Coexpression cluster: | MCL_coexpression_mm9:187 |
Association with transcript: | 0bp_to_ENSMUST00000025844, NM_009985, uc008gdk.2_5end |
EntrezGene: | Ctsw |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 3.44e-09 | 11 |
pro-T cell | 3.44e-09 | 11 |
lymphoid lineage restricted progenitor cell | 5.75e-08 | 12 |
mature alpha-beta T cell | 1.41e-07 | 9 |
alpha-beta T cell | 1.41e-07 | 9 |
immature T cell | 1.41e-07 | 9 |
mature T cell | 1.41e-07 | 9 |
immature alpha-beta T cell | 1.41e-07 | 9 |
lymphocyte | 5.97e-07 | 13 |
common lymphoid progenitor | 5.97e-07 | 13 |
CD4-positive, alpha-beta T cell | 9.34e-07 | 8 |