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FFCP PHASE1:Mm9::chr1:34858553..34858621,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr1:34858553..34858621,+
|DHSsupport=NA
|short_description=p1@Arhgef4
|DPIdataset=NA
|description=CAGE_peak_1_at_Arhgef4_5end
|association_with_transcript=0bp_to_ENSMUST00000159059,ENSMUST00000160855,ENSMUST00000162760,NM_183019,uc007apg.1,uc007aph.1,uc007api.1_5end
|EntrezGene=226970
|EntrezGene=226970
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=E0CYG8,Q3TQN9,Q7TNR9,E0CY60
|UniProt=E0CYG8,Q3TQN9,Q7TNR9,E0CY60
|association_with_transcript=0bp_to_ENSMUST00000159059,ENSMUST00000160855,ENSMUST00000162760,NM_183019,uc007apg.1,uc007aph.1,uc007api.1_5end
|cluster_id=chr1:34858553..34858621,+
|description=CAGE_peak_1_at_Arhgef4_5end
|id=chr1:34858553..34858621,+
|ontology_enrichment_celltype=CL:0000117!1.61e-12!23;CL:0000337!1.61e-12!23;CL:0000540!1.40e-07!33;CL:0000047!1.40e-07!33;CL:0000031!1.40e-07!33;CL:0000404!1.40e-07!33;CL:0000393!3.97e-07!39;CL:0000211!3.97e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,4.11e-13,23;CL:0000337,4.11e-13,23;CL:0000540,2.52e-07,33;CL:0000047,2.52e-07,33;CL:0000031,2.52e-07,33;CL:0000404,2.52e-07,33;CL:0000393,5.70e-07,39;CL:0000211,5.70e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.66e-22,54;UBERON:0001049,1.83e-20,52;UBERON:0005068,1.83e-20,52;UBERON:0006241,1.83e-20,52;UBERON:0007135,1.83e-20,52;UBERON:0000955,2.51e-17,47;UBERON:0006238,2.51e-17,47;UBERON:0002346,3.22e-17,64;UBERON:0003075,3.22e-17,64;UBERON:0007284,3.22e-17,64;UBERON:0002020,6.11e-17,34;UBERON:0002616,8.56e-17,46;UBERON:0001017,1.15e-16,73;UBERON:0003080,7.56e-16,40;UBERON:0001016,2.33e-15,75;UBERON:0002780,3.61e-15,39;UBERON:0001890,3.61e-15,39;UBERON:0006240,3.61e-15,39;UBERON:0003056,1.43e-14,49;UBERON:0003528,4.30e-14,29;UBERON:0002791,4.30e-14,29;UBERON:0001893,4.30e-14,29;UBERON:0010371,2.86e-13,73;UBERON:0004121,1.55e-10,95;UBERON:0000924,1.55e-10,95;UBERON:0006601,1.55e-10,95;UBERON:0000956,1.49e-09,21;UBERON:0001869,1.49e-09,21;UBERON:0000203,1.49e-09,21;UBERON:0010314,4.68e-09,92;UBERON:0002619,9.82e-08,17;UBERON:0002021,1.16e-07,10;UBERON:0000411,1.16e-07,10;UBERON:0001950,1.16e-07,10
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|phase1_expression=3.04282809499109,0,0,0,0,0.33575854382378,0.233612640595526,12.7832090207161,4.36445038670167,3.97909694747389,2.91070545983358,2.47293692885543,11.4704489053908,12.1514359362406,0.666219523631325,1.01237633694913,0,2.68142840554502,2.4680598049033,2.97072756258621,14.4573593256819,3.07801948722744,3.39559725880616,0.47997726838022,0.45881856213434,0,0.430761996159075,0.215471232685889,0.380046838912748,0.252030129759931,0.443461021310609,3.17515336729816,2.46025915033828,0,2.59966457776147,2.49351968037739,3.26670970019791,25.5304294749514,14.8453715459522,23.5585684788209,27.0586484494267,23.9065919735456,26.2175590636823,6.42073771675444,6.69087746048796,3.30384153891027,1.56478268869608,0.436050312760893,0,0.194429899074283,0.55994568650145,0,2.01339127269284,4.35217285206807,4.03312558970957,1.02903774414379,0.286533439938757,1.03134418455488,16.9945827122062,17.4567023159771,14.5781222806421,0.677689064138264,0.889294796111139,2.6996991518442,3.9554654502679,3.5524005747305,1.49800055259202,0.384218305321555,6.947204024668,8.77538599155989,8.62332341540666,36.5633260036869,25.6207507503872,9.0643191419066,7.09256485534949,16.5459381589804,77.0811166995721,56.0547414193974,64.6683505008785,15.8263545276233,16.3762882048313,13.5437476344758,78.7296057183894,59.6528366633581,55.0073691996516,20.6240009831567,28.0472211174233,27.0279196446686,0.37863096666592,0.377857800533928,0.579728977403356,0,0,0,0,0,4.49422144421606,0.340860645156116,0.259786004602869,1.41335829804136,1.97180787687353,0,0,0,0.216491041011214,0.253359865475099,0,2.39786147410026,1.55362730188303,7.86743337043571,1.56136794089522,3.04465478312141,1.84492397804847,3.76806601381556,4.58595957829249,5.02666365318702,0,0.433798070759735,1.76922110389975,1.13236794963186,1.76673214768315,1.45462575940567,1.86391761218122,7.31951992528868,5.44561437714983,1.02182822083437,1.67741174308288,1.79970819298022,1.52484272487678,72.4986694719342,62.6775825861518,30.0313901549746,80.8283088894086,84.8975318336697,65.4532340362614,55.9732357583764,0.916554274652847,3.6078021476927,8.08712826987759,1.26265113531884,1.43132487258974,2.29902104433473,1.26043490863744,1.80845781402858,1.97305847538851,2.0498195245576,3.5606655332697,3.62184719034622,0.646703978798527,2.08016688184601,2.11141348996739,2.6303487891309,1.11218899690239,0.696504333044333,0.411564272815887,1.59227413454795,0.702213187313235,0.772043721344145,2.55747149456033,1.03562886267751,0.703578179943289,0,0.710234206755631,0.787056926989615,0.462801338662135,0.930135779001631,0,0.700592054203017,0.329119699826961,0.656669856316381,0.162137619091711,0.146199987425332,0.439100230582101,0.402619256281115,106.406713973448,16.7734518178234,0.330418782983798,0.528901133327089,0.853153002140936,0.928946687441754,0.515469845288373,0.403367049246685,0.444756087689741,1.14135375667535,0,0.329397909448022,1.50801125280162,0.397912944082302,1.36474860983384,0.898819408654221,0.432276099749388,0.796565093017469,0.569003702859245,0.913988100877831,0,0.407302655690628,0.775809948670503,0.911765658574141,0.569128834118316,0.295220295959204,0.627994911365499,0.370191491765402,0,0.333690211432188,0.786235980452812,0.224862112384854,0.405720242777006,0.482354319504834,0.50925170356284,0.863088412352432,1.13494658742525,0.549122826376163,0,0,0,0,0,0.482443521363367,0.554259570499814,0.757965647081939,0.488894929326078,0.678980343100753,0.234690248288502,0.837531287209079,0.238043640886014,1.36593553500459,1.26108115284953,1.55025282754142,2.23236676120482,1.14704320301017,1.89953480052485,1.3018415272336,1.50791283939272,2.17562273527484,0,1.93155722413313,92.7982410129437,80.172793629067,3.11476396215683,0.504941854408746,0.631016438832513,0.780877488593277,1.07711698866399,0.716906393857656,0.668396022247182,0.566153061577665,0,2.04579100537918,2.37172666767914,17.0300297703558,1.56134093729095,1.6025904330053,1.30309567482861,1.15479086080775,3.98235415019888,1.45668381692989,0.302323556964751,0.377210159511796,0.885905678642318,0.614870295887855,0.775284879504663,1.09060118843252,1.78248689192361,5.05658812697306,4.21674434299995,3.09406629744561,7.83011093233712,1.44048875225048,1.55230420539305,1.50035924522115,2.30542303734956,3.21063871683727,4.44282355625727,4.56697423671899,0.23467170806371,0.21183207086382,0.220528398054962,0.16488625294148,0.484393280087717,0.904693873922338,0.716234064018819,0,0.582961673259701,113.294859528421,2.05045056957423,2.27025554759545,1.85194527369712,1.31857919903284,0.683471138605126,1.83022538565218,3.39956859987711,2.37917468950219,3.31679937130617,10.5013767981662,1.89801596148681,2.23651413839534,0.648032044930808,1.04544148007234,0.87345025498471,2.15782954215713,4.46328660916814,13.3495530411855,0.648074866458964,0.621339313086926,0,3.73791365109947,2.48187735685646,3.88902376688095,4.39143399824286,5.57555214119568,4.92900402312167,9.76532886329626,5.55754525456268,1.69108884578204,1.15212002503146,1.89606672376907,1.82452693761148,1.33524244314275,1.16928740680016,1.43221356533985,1.39076948346885,3.4856680360791,2.95379054349154,2.22126189885925,3.04827226619999,1.71404514732629,3.50848370663109,2.5977197242889,2.80504565235765,0.226730383615211,0.221985953374065,0.986852422704233,0.335769232728157,0.19318959403219,0.375364950902364,0.183151624267265,0.428736758158132,0,53.0866732060043,42.8102469951675,46.9774321020305,51.72780788545,58.9170967002752,67.2300568676833,58.0519350199353,61.243683638494,67.0650765296623,75.5930055157657,1.24544817101012,1.99512436700516,3.24393850932855,1.70174701947806,3.14419743941973,4.59608771125035,3.77819437262746,4.12070114477788,3.53011130550997,1.26348605881899,1.77435509923168,1.88626341386076,2.34103768674706,2.81710670581425,2.5845961030026,4.76293691283074,3.36064545240081,2.31491064556446,1.64834360321323,2.64958056241915,3.08582327146874,3.90446773550542,5.7224685587357,2.90692833264657,2.4468438907986,3.72304274723377,2.0122077016005,1.8414879800649,2.30866993537965,2.24456908663095,2.60997039873183,3.34915240076916,3.6830793885272,2.94379998253335,2.12197272079256,7.24450676020043,2.10538447600868,2.14871054048298,2.29545998482612,2.20591419119516,2.08681052058379
|short_description=p1@Arhgef4
}}
}}

Latest revision as of 02:05, 27 September 2015

Short description:p1@Arhgef4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Arhgef4_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000159059, ENSMUST00000160855, ENSMUST00000162760, NM_183019, uc007apg.1, uc007aph.1, uc007api.1_5end
EntrezGene:Arhgef4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Arhgef4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.04
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E912.78
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.91
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.47
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E411.47
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E812.15
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.47
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.08
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G825.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H114.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H323.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G927.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H223.91
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H426.22
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.42
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.69
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C316.99
Mouse Granule cells, donor2.CNhs12357.11731-123E317.46
Mouse Granule cells, donor3.CNhs12108.11636-122C714.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.95
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.62
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F136.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D525.62
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.09
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D377.08
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F356.05
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D764.67
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.83
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.54
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E478.73
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E559.65
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I655.01
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D620.62
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F628.05
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E127.03
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.40
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D77.87
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F53.77
adrenal gland, neonate N00.CNhs11191.1311-23C14.59
adrenal gland, neonate N25.CNhs11223.1377-27I35.03
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B27.32
cerebellum, neonate N30.CNhs11135.1395-42I25.45
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.52
corpora quadrigemina, adult.CNhs10501.16-22A472.50
corpus striatum, adult.CNhs10487.19-21D862.68
corpus striatum, neonate N00.CNhs11226.630-43F130.03
cortex, adult.CNhs10473.12-14D580.83
cortex, neonate N30.CNhs11107.1392-42F284.90
diencephalon, adult.CNhs10482.20-12F265.45
diencephalon, neonate N30.CNhs11201.1388-42B255.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.61
epididymis, adult.CNhs10490.58-23B28.09
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C61.97
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G83.56
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H22.08
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.56
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E8106.41
hippocampus, neonate N00.CNhs11228.627-43G116.77
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C292.80
medulla oblongata, neonate N30.CNhs11200.1396-42A380.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.11
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I917.03
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G87.83
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F54.44
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C9113.29
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F21.85
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.32
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A94.46
stomach, neonate N25.CNhs11104.1355-25E413.35
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.74
testis, embryo E15.CNhs11034.443-27C52.48
testis, embryo E16.CNhs11033.470-26G53.89
testis, embryo E17.CNhs11029.486-18I54.39
testis, embryo E18.CNhs11027.503-18G55.58
testis, neonate N00.CNhs11189.1300-22B74.93
testis, neonate N07.CNhs11222.726-26I49.77
testis, neonate N10.CNhs11204.763-44D95.56
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F83.49
thymus, neonate N03.CNhs11137.2104-43C72.95
thymus, neonate N06.CNhs11197.681-26C42.22
thymus, neonate N07.CNhs11211.713-19D33.05
thymus, neonate N10.CNhs11194.748-24E41.71
thymus, neonate N20.CNhs11186.820-7A23.51
thymus, neonate N25.CNhs11125.1362-25G72.60
thymus, neonate N30.CNhs11132.1393-42G22.81
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.99
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A153.09
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A242.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A346.98
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D751.73
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A458.92
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A567.23
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A658.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A761.24
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A867.07
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A975.59
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.90
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.72
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.35
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I57.24
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.11e-1323
neuroblast (sensu Vertebrata)4.11e-1323
neuron2.52e-0733
neuronal stem cell2.52e-0733
neuroblast2.52e-0733
electrically signaling cell2.52e-0733
electrically responsive cell5.70e-0739
electrically active cell5.70e-0739

Uber anatomy
Ontology termp-valuen
regional part of nervous system8.66e-2254
neural tube1.83e-2052
neural rod1.83e-2052
future spinal cord1.83e-2052
neural keel1.83e-2052
brain2.51e-1747
future brain2.51e-1747
neurectoderm3.22e-1764
neural plate3.22e-1764
presumptive neural plate3.22e-1764
gray matter6.11e-1734
regional part of brain8.56e-1746
central nervous system1.15e-1673
anterior neural tube7.56e-1640
nervous system2.33e-1575
regional part of forebrain3.61e-1539
forebrain3.61e-1539
future forebrain3.61e-1539
pre-chordal neural plate1.43e-1449
brain grey matter4.30e-1429
regional part of telencephalon4.30e-1429
telencephalon4.30e-1429
ecto-epithelium2.86e-1373
ectoderm-derived structure1.55e-1095
ectoderm1.55e-1095
presumptive ectoderm1.55e-1095
cerebral cortex1.49e-0921
cerebral hemisphere1.49e-0921
pallium1.49e-0921
structure with developmental contribution from neural crest4.68e-0992
regional part of cerebral cortex9.82e-0817
occipital lobe1.16e-0710
visual cortex1.16e-0710
neocortex1.16e-0710
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