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FFCP PHASE1:Mm9::chr2:132607398..132607414,+: Difference between revisions

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(Created page with "{{FFCP |id=chr2:132607398..132607414,+ |short_description=p1@Chgb |description=CAGE_peak_1_at_Chgb_5end |association_with_transcript=384bp_to_ENSMUST00000028826,ENSMUST000...")
 
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{{FFCP
{{FFCP
|id=chr2:132607398..132607414,+
|DHSsupport=NA
|short_description=p1@Chgb
|DPIdataset=NA
|description=CAGE_peak_1_at_Chgb_5end
|association_with_transcript=384bp_to_ENSMUST00000028826,ENSMUST00000168530,NM_007694,uc008mnf.1_5end
|EntrezGene=12653
|EntrezGene=12653
|HGNC=
|HGNC=
|MCL_coexpression_id=535
|TSSclassifier=NA
|UniProt=P16014,E9Q957,Q3TY66
|UniProt=P16014,E9Q957,Q3TY66
|association_with_transcript=384bp_to_ENSMUST00000028826,ENSMUST00000168530,NM_007694,uc008mnf.1_5end
|cluster_id=chr2:132607398..132607414,+
|description=CAGE_peak_1_at_Chgb_5end
|id=chr2:132607398..132607414,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.69e-21!71;UBERON:0003075!1.69e-21!71;UBERON:0007284!1.69e-21!71;UBERON:0004121!2.05e-16!102;UBERON:0000924!2.05e-16!102;UBERON:0006601!2.05e-16!102;UBERON:0001017!1.16e-15!73;UBERON:0005743!1.16e-15!73;UBERON:0000073!2.23e-15!75;UBERON:0001016!2.23e-15!75;UBERON:0000033!8.29e-15!63;UBERON:0001049!1.11e-14!52;UBERON:0005068!1.11e-14!52;UBERON:0006241!1.11e-14!52;UBERON:0007135!1.11e-14!52;UBERON:0000955!1.18e-14!50;UBERON:0006238!1.18e-14!50;UBERON:0000160!2.53e-14!43;UBERON:0002616!3.86e-14!49;UBERON:0003056!1.77e-13!49;UBERON:0005409!1.20e-12!59;UBERON:0003080!9.03e-12!40;UBERON:0002780!2.16e-11!39;UBERON:0001890!2.16e-11!39;UBERON:0006240!2.16e-11!39;UBERON:0002020!6.35e-09!34;UBERON:0002021!7.92e-08!10;UBERON:0000411!7.92e-08!10;UBERON:0001950!7.92e-08!10;UBERON:0002791!1.15e-07!29;UBERON:0003528!1.15e-07!29;UBERON:0001893!1.15e-07!29;UBERON:0007811!4.65e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.24e-16,64;UBERON:0003075,5.24e-16,64;UBERON:0007284,5.24e-16,64;UBERON:0001017,2.83e-15,73;UBERON:0001016,5.33e-15,75;UBERON:0000073,9.35e-15,54;UBERON:0001049,7.53e-14,52;UBERON:0005068,7.53e-14,52;UBERON:0006241,7.53e-14,52;UBERON:0007135,7.53e-14,52;UBERON:0003056,6.87e-13,49;UBERON:0000955,2.00e-12,47;UBERON:0006238,2.00e-12,47;UBERON:0004121,2.65e-12,95;UBERON:0000924,2.65e-12,95;UBERON:0006601,2.65e-12,95;UBERON:0000160,4.51e-12,31;UBERON:0010371,5.17e-12,73;UBERON:0002616,6.55e-12,46;UBERON:0003080,4.81e-11,40;UBERON:0010314,9.17e-11,92;UBERON:0005409,1.19e-10,47;UBERON:0002780,1.19e-10,39;UBERON:0001890,1.19e-10,39;UBERON:0006240,1.19e-10,39;UBERON:0002021,2.70e-08,10;UBERON:0000411,2.70e-08,10;UBERON:0001950,2.70e-08,10;UBERON:0002020,4.02e-08,34;UBERON:0003528,8.37e-07,29;UBERON:0002791,8.37e-07,29;UBERON:0001893,8.37e-07,29
|phase1_expression=3.68342348341026,10.8182376368202,5.45999087267443,9.37639055051173,8.01433167914156,315.109393378617,342.00890583185,0,0.140788722151667,0.936258105287974,0,0,0,0,0,0,0,0,0,0,32.7416667081619,0,0,147.193028969934,98.4165815778159,12.0588712464154,24.5534337810673,59.6855314539913,55.4868384812612,47.8857246543868,45.8982157056481,0,0,0,9.82095507154334,21.7767385419625,11.0251452381679,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,14.3644687210314,14.8117474196169,14.5781222806421,0,0,0,0,0,1.19840044207362,3.07374644257244,2.07379224616955,0.945041568321835,1.26194976810829,20.5668708770739,24.2955395046775,0.857435594504678,1.72521847832825,2.75765635983006,46.2486700197433,75.9739661606867,116.894571808001,6.59431438650969,7.86793734980723,8.85552729946492,81.8006187074046,45.0210088025344,73.190360685092,35.9446874277875,39.5793272621506,13.6071595452469,1.21161909333094,1.13357340160178,0.289864488701678,0,0,1.07940638327563,0,0,15.870219474888,0,0,0,3.09855523508697,0,0,0,0,0,0,19.5254434319593,0,2168.14588318083,234.725647114582,294.418117527841,264.977206347211,486.984851625524,637.33079267552,1265.58824128116,0,0.289198713839823,0,0.323533699894818,0,0,145.385573750135,198.212599576817,155.20000974877,67.6961196302767,0.11981512450592,0,0,62.3129059924062,99.7351314144606,7.91622418311046,157.832482734587,191.019446625757,65.661022080821,79.3359776401335,0.611036183101898,0,0,19.5710925974421,1.17108398666433,5.9774547152703,12.4242869565691,16.1254155084215,18.7100372666152,37.1529788826064,37.668093273011,65.451952796971,0,0.189106080167819,0,0,0,0,0,5.57295947091781,0,0,0,0,0.234526059981096,0,0,0,0.308534225774757,0.465067889500816,0.536546802799238,0,0,0,0,0,0,0,234.052712751874,7.20332286654991,162.235622445045,65.0548393992319,8.10495352033889,26.0105072483691,27.0621668776396,46.7905777126155,56.7064011804419,62.584230991032,83.9916438933786,74.2792285805289,56.8017571888609,60.8806804445922,60.8287951811655,86.2866632308053,90.7779809473716,103.95174463878,8.72472344384176,33.0178201442116,4.50830942692322,3.86937522906097,2.71533482034676,3.0158402552837,0.126473074248515,0,0,0,0,0.166845105716094,0.196558995113203,0,0,1.20588579876208,0.25462585178142,0,0.324270453550071,0.274561413188081,0,0.744281895337007,0,0.252578877947112,0,0,0,0.37898282354097,0,0.169745085775188,0,0,0.476087281772027,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,97.2936575326019,136.082768133548,0,0,4.10160685241134,6.24701990874622,12.2791336707695,2.62865677747807,4.90157082981267,5.66153061577665,4.04810701674894,9.64444331107329,8.30104333687699,102.501499938556,0.141940085208269,0.712262414669021,1.14020871547503,0,2.65490276679926,172.131471033882,75.8832127981525,37.9096210309355,45.7717933965198,69.1729082873837,72.8767786734384,66.5266724943835,47.4141513251679,9.16506598013866,7.37930260024991,3.09406629744561,2021.18993936024,3.96134406868882,11.3835641728824,31.0788700795809,96.8277675686814,126.64186049747,151.714196995156,161.061958081623,0,0,4.19003956304428,0,0.161464426695906,0,0,0.164140899745061,93.2738677215522,80.6600063745717,0,1.65109494370578,0,0,0,0,0,0,0,128.88053343204,1.10717597753397,17.485474172909,14.2567049884778,8.36353184057875,13.9752040797554,9.30563990055263,17.4398791580459,33.7665165159398,75.695144402407,0,0,0,0,0,0.129159823477731,0.168956125490778,0.58678619322877,0.13020438484395,0,0,0,0,0.608175645870493,0.308132871494482,0,1.07416017400489,0.39736270956253,0,0.147689527174577,0.201932899896295,0.0762068066549998,0.403304740547362,0.38983152295901,0.192423683280659,0,0,0,0,0,0.19318959403219,0,0,1.2862102744744,0,270.516132613575,255.020181024976,253.219816940213,247.296729392566,215.115911207982,199.423988910881,191.031367565601,230.114134847577,265.08830925576,249.560470264377,1.3492355185943,4.38927360741134,4.26834014385335,4.86213434136588,3.98265008993166,4.96377472815038,7.77863547305653,7.2112270033613,8.98573786857083,7.83361356467772,9.63221339582911,8.86543804514558,8.42773567228942,7.87509374579892,7.06456268154043,7.1444053692461,6.48952225291191,7.90927803901191,9.89006161927936,9.71512872887022,11.6575545811041,8.69631450180754,6.91464950847231,8.28474574804273,8.84628175904108,8.03838774970927,7.68297486065645,4.99832451731901,8.28405094459757,5.61142271657738,7.23673610557462,8.0773675547962,5.32000356120596,6.66228417099654,5.78719832943424,4.74640098082097,8.65546951248011,13.1071342969462,2.86932498103265,1.54413993383661,1.15933917810211
|phase1_expression=3.68342348341026,10.8182376368202,5.45999087267443,9.37639055051173,8.01433167914156,315.109393378617,342.00890583185,0,0.140788722151667,0.936258105287974,0,0,0,0,0,0,0,0,0,0,32.7416667081619,0,0,147.193028969934,98.4165815778159,12.0588712464154,24.5534337810673,59.6855314539913,55.4868384812612,47.8857246543868,45.8982157056481,0,0,0,9.82095507154334,21.7767385419625,11.0251452381679,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,14.3644687210314,14.8117474196169,14.5781222806421,0,0,0,0,0,1.19840044207362,3.07374644257244,2.07379224616955,0.945041568321835,1.26194976810829,20.5668708770739,24.2955395046775,0.857435594504678,1.72521847832825,2.75765635983006,46.2486700197433,75.9739661606867,116.894571808001,6.59431438650969,7.86793734980723,8.85552729946492,81.8006187074046,45.0210088025344,73.190360685092,35.9446874277875,39.5793272621506,13.6071595452469,1.21161909333094,1.13357340160178,0.289864488701678,0,0,1.07940638327563,0,0,15.870219474888,0,0,0,3.09855523508697,0,0,0,0,0,0,19.5254434319593,0,2168.14588318083,234.725647114582,294.418117527841,264.977206347211,486.984851625524,637.33079267552,1265.58824128116,0,0.289198713839823,0,0.323533699894818,0,0,145.385573750135,198.212599576817,155.20000974877,67.6961196302767,0.11981512450592,0,0,62.3129059924062,99.7351314144606,7.91622418311046,157.832482734587,191.019446625757,65.661022080821,79.3359776401335,0.611036183101898,0,0,19.5710925974421,1.17108398666433,5.9774547152703,12.4242869565691,16.1254155084215,18.7100372666152,37.1529788826064,37.668093273011,65.451952796971,0,0.189106080167819,0,0,0,0,0,5.57295947091781,0,0,0,0,0.234526059981096,0,0,0,0.308534225774757,0.465067889500816,0.536546802799238,0,0,0,0,0,0,0,234.052712751874,7.20332286654991,162.235622445045,65.0548393992319,8.10495352033889,26.0105072483691,27.0621668776396,46.7905777126155,56.7064011804419,62.584230991032,83.9916438933786,74.2792285805289,56.8017571888609,60.8806804445922,60.8287951811655,86.2866632308053,90.7779809473716,103.95174463878,8.72472344384176,33.0178201442116,4.50830942692322,3.86937522906097,2.71533482034676,3.0158402552837,0.126473074248515,0,0,0,0,0.166845105716094,0.196558995113203,0,0,1.20588579876208,0.25462585178142,0,0.324270453550071,0.274561413188081,0,0.744281895337007,0,0.252578877947112,0,0,0,0.37898282354097,0,0.169745085775188,0,0,0.476087281772027,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,97.2936575326019,136.082768133548,0,0,4.10160685241134,6.24701990874622,12.2791336707695,2.62865677747807,4.90157082981267,5.66153061577665,4.04810701674894,9.64444331107329,8.30104333687699,102.501499938556,0.141940085208269,0.712262414669021,1.14020871547503,0,2.65490276679926,172.131471033882,75.8832127981525,37.9096210309355,45.7717933965198,69.1729082873837,72.8767786734384,66.5266724943835,47.4141513251679,9.16506598013866,7.37930260024991,3.09406629744561,2021.18993936024,3.96134406868882,11.3835641728824,31.0788700795809,96.8277675686814,126.64186049747,151.714196995156,161.061958081623,0,0,4.19003956304428,0,0.161464426695906,0,0,0.164140899745061,93.2738677215522,80.6600063745717,0,1.65109494370578,0,0,0,0,0,0,0,128.88053343204,1.10717597753397,17.485474172909,14.2567049884778,8.36353184057875,13.9752040797554,9.30563990055263,17.4398791580459,33.7665165159398,75.695144402407,0,0,0,0,0,0.129159823477731,0.168956125490778,0.58678619322877,0.13020438484395,0,0,0,0,0.608175645870493,0.308132871494482,0,1.07416017400489,0.39736270956253,0,0.147689527174577,0.201932899896295,0.0762068066549998,0.403304740547362,0.38983152295901,0.192423683280659,0,0,0,0,0,0.19318959403219,0,0,1.2862102744744,0,270.516132613575,255.020181024976,253.219816940213,247.296729392566,215.115911207982,199.423988910881,191.031367565601,230.114134847577,265.08830925576,249.560470264377,1.3492355185943,4.38927360741134,4.26834014385335,4.86213434136588,3.98265008993166,4.96377472815038,7.77863547305653,7.2112270033613,8.98573786857083,7.83361356467772,9.63221339582911,8.86543804514558,8.42773567228942,7.87509374579892,7.06456268154043,7.1444053692461,6.48952225291191,7.90927803901191,9.89006161927936,9.71512872887022,11.6575545811041,8.69631450180754,6.91464950847231,8.28474574804273,8.84628175904108,8.03838774970927,7.68297486065645,4.99832451731901,8.28405094459757,5.61142271657738,7.23673610557462,8.0773675547962,5.32000356120596,6.66228417099654,5.78719832943424,4.74640098082097,8.65546951248011,13.1071342969462,2.86932498103265,1.54413993383661,1.15933917810211
|short_description=p1@Chgb
}}
}}

Latest revision as of 18:54, 25 September 2015

Short description:p1@Chgb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Chgb_5end
Coexpression cluster:MCL_coexpression_mm9:535
Association with transcript: 384bp_to_ENSMUST00000028826, ENSMUST00000168530, NM_007694, uc008mnf.1_5end
EntrezGene:Chgb
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Chgb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.82
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.38
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7315.11
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8342.01
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A332.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1147.19
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D298.42
GP2+ M cell, pool1.CNhs13228.11845-124H912.06
GP2+ M cell, pool2.CNhs13231.11846-124I124.55
GP2+ M cell, pool3.CNhs13240.11847-124I259.69
Ileum epithelium, pool1.CNhs13199.10252-104B955.49
Ileum epithelium, pool2.CNhs13232.10253-104C147.89
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C845.90
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.82
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F621.78
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F711.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C314.36
Mouse Granule cells, donor2.CNhs12357.11731-123E314.81
Mouse Granule cells, donor3.CNhs12108.11636-122C714.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F120.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D524.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D346.25
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F375.97
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7116.89
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.59
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.87
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.86
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E481.80
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E545.02
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I673.19
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D635.94
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F639.58
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.61
Mouse Schwann, donor1.CNhs12507.11728-123D91.21
Mouse Schwann, donor2.CNhs12573.11746-123F91.13
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A715.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.10
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B619.53
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72168.15
adrenal gland, embryo E14.CNhs11038.406-44C5234.73
adrenal gland, embryo E16.CNhs11004.1254-43D6294.42
adrenal gland, embryo E17.CNhs11043.1263-45I1264.98
adrenal gland, embryo E18.CNhs11026.1262-18F5486.98
adrenal gland, neonate N00.CNhs11191.1311-23C1637.33
adrenal gland, neonate N25.CNhs11223.1377-27I31265.59
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H4145.39
cerebellum, adult.CNhs10494.15-8B2198.21
cerebellum, neonate N30.CNhs11135.1395-42I2155.20
colon, adult.CNhs10468.36-18H767.70
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A462.31
corpus striatum, adult.CNhs10487.19-21D899.74
corpus striatum, neonate N00.CNhs11226.630-43F17.92
cortex, adult.CNhs10473.12-14D5157.83
cortex, neonate N30.CNhs11107.1392-42F2191.02
diencephalon, adult.CNhs10482.20-12F265.66
diencephalon, neonate N30.CNhs11201.1388-42B279.34
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G419.57
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E25.98
eyeball, embryo E15.CNhs10593.426-16C912.42
eyeball, embryo E17.CNhs11023.1261-18D416.13
eyeball, neonate N00.CNhs11207.633-15C618.71
eyeball, neonate N01.CNhs11140.1532-43E737.15
eyeball, neonate N02.CNhs11205.1551-44G837.67
eyeball, neonate N16.CNhs11188.777-19A265.45
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I65.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E8234.05
hippocampus, neonate N00.CNhs11228.627-43G17.20
intestinal mucosa, adult.CNhs10506.860-29I3162.24
intestine, adult.CNhs10496.178-9A365.05
intestine, embryo E12.CNhs11019.1251-16I58.10
intestine, embryo E13.CNhs11010.381-16D526.01
intestine, embryo E15.CNhs10602.976-16D827.06
intestine, embryo E16.CNhs10585.463-22H446.79
intestine, embryo E17.CNhs10582.482-18D356.71
intestine, embryo E18.CNhs10526.1289-20F762.58
intestine, neonate N00.CNhs11126.644-26D183.99
intestine, neonate N01.CNhs11192.1322-23E974.28
intestine, neonate N06.CNhs11102.688-20B856.80
intestine, neonate N07.CNhs11095.720-20F260.88
intestine, neonate N10.CNhs11098.755-23A560.83
intestine, neonate N20.CNhs11187.827-18D186.29
intestine, neonate N25.CNhs11121.1352-25E390.78
intestine, neonate N30.CNhs11131.1384-42G1103.95
kidney, embryo E14.CNhs10606.411-4I98.72
kidney, embryo E15.CNhs10997.434-16F833.02
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I23.87
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G73.02
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C297.29
medulla oblongata, neonate N30.CNhs11200.1396-42A3136.08
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.25
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.28
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.64
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.30
olfactory brain, adult.CNhs10489.18-22I9102.50
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F4172.13
pancreas, embryo E15.CNhs11042.1556-45F275.88
pancreas, embryo E16.CNhs11003.460-26E537.91
pancreas, embryo E17.CNhs10599.1558-45G345.77
pancreas, embryo E18.CNhs10580.1535-43I769.17
pancreas, neonate N00.CNhs11105.645-26G972.88
pancreas, neonate N01.CNhs11138.1531-43D766.53
pancreas, neonate N02.CNhs11139.1539-43D847.41
pancreas, neonate N16.CNhs11136.787-43B69.17
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G82021.19
pituitary gland, embryo E12.CNhs11018.346-16E63.96
pituitary gland, embryo E13.CNhs11009.370-44C711.38
pituitary gland, embryo E14.CNhs11037.398-44A531.08
pituitary gland, embryo E15.CNhs10592.427-16B996.83
pituitary gland, embryo E16.CNhs11036.449-43F6126.64
pituitary gland, embryo E17.CNhs11039.1265-44F5151.71
pituitary gland, neonate N00.CNhs11190.1308-22E9161.06
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F84.19
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I193.27
spinal cord, adult.CNhs10505.24-13C980.66
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H6128.88
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G817.49
stomach, embryo E16.CNhs11022.459-17D414.26
stomach, embryo E17.CNhs11006.1035-18D58.36
stomach, embryo E18.CNhs10999.1286-20C613.98
stomach, neonate N03.CNhs11193.1340-24B89.31
stomach, neonate N07.CNhs11210.718-18A917.44
stomach, neonate N25.CNhs11104.1355-25E433.77
stomach, neonate N30.CNhs11134.1386-42I175.70
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1270.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2255.02
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3253.22
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7247.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4215.12
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5199.42
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6191.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7230.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8265.09
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9249.56
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H24.27
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B13.98
whole body, embryo E16.CNhs10514.453-14F24.96
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.88
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.49
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.91
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.72
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G511.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.70
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.28
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.04
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.28
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.66
whole body, embryo E17.5.CNhs10513.490-9F95.79
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B38.66
whole body, neonate N00.CNhs10525.657-19C213.11
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm5.24e-1664
neural plate5.24e-1664
presumptive neural plate5.24e-1664
central nervous system2.83e-1573
nervous system5.33e-1575
regional part of nervous system9.35e-1554
neural tube7.53e-1452
neural rod7.53e-1452
future spinal cord7.53e-1452
neural keel7.53e-1452
pre-chordal neural plate6.87e-1349
brain2.00e-1247
future brain2.00e-1247
ectoderm-derived structure2.65e-1295
ectoderm2.65e-1295
presumptive ectoderm2.65e-1295
intestine4.51e-1231
ecto-epithelium5.17e-1273
regional part of brain6.55e-1246
anterior neural tube4.81e-1140
structure with developmental contribution from neural crest9.17e-1192
gastrointestinal system1.19e-1047
regional part of forebrain1.19e-1039
forebrain1.19e-1039
future forebrain1.19e-1039
occipital lobe2.70e-0810
visual cortex2.70e-0810
neocortex2.70e-0810
gray matter4.02e-0834
brain grey matter8.37e-0729
regional part of telencephalon8.37e-0729
telencephalon8.37e-0729
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