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FFCP PHASE1:Mm9::chr2:180332924..180332931,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:180332924..180332931,+
|DHSsupport=NA
|short_description=p2@Col9a3
|DPIdataset=NA
|description=CAGE_peak_2_at_Col9a3_5end
|association_with_transcript=0bp_to_ENSMUST00000103059,ENSMUST00000171895,NM_009936,uc008ojl.1_5end
|EntrezGene=12841
|EntrezGene=12841
|HGNC=
|HGNC=
|MCL_coexpression_id=1050
|TSSclassifier=NA
|UniProt=A2ACT7,E9PW00,Q8BSX1
|UniProt=A2ACT7,E9PW00,Q8BSX1
|association_with_transcript=0bp_to_ENSMUST00000103059,ENSMUST00000171895,NM_009936,uc008ojl.1_5end
|cluster_id=chr2:180332924..180332931,+
|description=CAGE_peak_2_at_Col9a3_5end
|id=chr2:180332924..180332931,+
|ontology_enrichment_celltype=CL:0000221!2.25e-10!44;CL:0000133!2.25e-10!44;CL:0002319!9.53e-10!43;CL:0000540!9.31e-08!33;CL:0000047!9.31e-08!33;CL:0000031!9.31e-08!33;CL:0000404!9.31e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000221,2.34e-09,44;CL:0000133,2.34e-09,44;CL:0002319,1.37e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.52e-17!73;UBERON:0005743!1.52e-17!73;UBERON:0000073!2.84e-17!75;UBERON:0001016!2.84e-17!75;UBERON:0004121!1.32e-16!102;UBERON:0000924!1.32e-16!102;UBERON:0006601!1.32e-16!102;UBERON:0002346!3.99e-14!71;UBERON:0003075!3.99e-14!71;UBERON:0007284!3.99e-14!71;UBERON:0001049!3.72e-13!52;UBERON:0005068!3.72e-13!52;UBERON:0006241!3.72e-13!52;UBERON:0007135!3.72e-13!52;UBERON:0000033!1.56e-11!63;UBERON:0003056!1.64e-11!49;UBERON:0002020!7.56e-11!34;UBERON:0003080!3.38e-10!40;UBERON:0000955!5.77e-10!50;UBERON:0006238!5.77e-10!50;UBERON:0002616!6.95e-10!49;UBERON:0002780!7.22e-10!39;UBERON:0001890!7.22e-10!39;UBERON:0006240!7.22e-10!39;UBERON:0002791!3.69e-08!29;UBERON:0003528!3.69e-08!29;UBERON:0001893!3.69e-08!29
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.97e-14,73;UBERON:0002346,1.50e-13,64;UBERON:0003075,1.50e-13,64;UBERON:0007284,1.50e-13,64;UBERON:0001016,3.25e-13,75;UBERON:0004121,1.31e-12,95;UBERON:0000924,1.31e-12,95;UBERON:0006601,1.31e-12,95;UBERON:0010371,1.63e-12,73;UBERON:0001049,3.71e-12,52;UBERON:0005068,3.71e-12,52;UBERON:0006241,3.71e-12,52;UBERON:0007135,3.71e-12,52;UBERON:0000073,1.39e-10,54;UBERON:0002020,1.61e-10,34;UBERON:0003056,3.43e-10,49;UBERON:0003080,1.29e-08,40;UBERON:0002616,1.56e-08,46;UBERON:0010314,1.69e-08,92;UBERON:0000026,2.50e-08,12;UBERON:0004708,2.50e-08,12;UBERON:0002101,2.50e-08,12;UBERON:0004357,2.50e-08,12;UBERON:0004347,2.50e-08,12;UBERON:0005732,2.50e-08,12;UBERON:0005733,2.50e-08,12;UBERON:0002780,3.40e-08,39;UBERON:0001890,3.40e-08,39;UBERON:0006240,3.40e-08,39;UBERON:0000955,3.49e-08,47;UBERON:0006238,3.49e-08,47;UBERON:0010707,1.91e-07,13;UBERON:0003528,4.41e-07,29;UBERON:0002791,4.41e-07,29;UBERON:0001893,4.41e-07,29
|phase1_expression=37.314681375417,0,0,0,0,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,3.73466510648602,2.91644848611425,1.25987779462826,8.62515386189829,0,0,0,0,0,0,1.41621522601718,1.05798195854407,0,0,0.889294796111139,0,0,0,1.19840044207362,3.45796474789399,1.03689612308478,1.4850653216486,1.26194976810829,7.14127461009509,6.40518768759679,1.5923803897944,1.0543001812006,0,0,0.766124028511126,0.768032666281217,1.18697658957174,1.64677758484337,1.04182674111352,0.837548997004143,1.68828783009504,0.763991238884051,4.12480019663135,3.41692033917847,2.23679334990361,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,38.0277233397037,0,0,0,0,0,0,0,0,0,1.04091196059682,0.304465478312141,0.230615497256059,0.452167921657868,0.23517741427141,0,0,0,0.884610551949874,18.7649545938995,4.41683036920787,4.363877278217,0,0.292780797011547,1.04723353406728,0,0,0,0,1.49790639404823,0.915001205637253,4.02093926761166,0.695297280769106,1.27857728665165,1.45451631191692,2.43361894601636,0.101839363850316,3.23458123586242,0,0,0.390361328888111,0,0.540186389416048,3.16480117455002,6.5995404176788,4.99643509110914,3.37326208415024,2.58703370739016,0.862271971731369,4.16033376369202,5.10258260075452,11.3981780862339,8.34141747676794,4.87553033131033,8.43706759272568,3.78165106955137,0,0,0,0.828503090142008,1.87620847984877,0.180062061461015,0.946978942340841,0.983821158737019,0.154267112887378,0,0.268273401399619,0,0,0.164167464079095,0.0810688095458557,0,0,0,0.630869845692382,3.2929475961371,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0,0,0,0,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0,0,0,0.342745537829186,0,0.203651327845314,0.387904974335251,0.140271639780637,0,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0,1.70542270593436,1.14075483509418,2.03694102930226,1.40814148973101,0.670025029767263,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0.491764273019036,0.827810238914197,0.321101179975584,1.05490517932983,0,1.26235463602186,0.94652465824877,0.780877488593277,1.72338718186239,1.43381278771531,0.668396022247182,1.13230612315533,3.64329631507405,0.584511715822624,0.790575555893047,0.642642632843614,0,0.534196811001766,0.488660878060728,0.164970122972535,0,1.69946445308487,3.62788268357701,1.50884063804718,1.77181135728464,2.15204603560749,0.775284879504663,2.54473610634254,1.42598951353889,0.316036757935816,0,0,0,2.34079422240703,0.905510786479282,1.07168517515796,1.59606210278046,0.891844088010353,1.81003922662333,0.304464949114599,0,0,0,0.32977250588296,0,0.361877549568935,0.238744688006273,0.328281799490123,0.291480836629851,1.11255181206306,0,0.206386867963223,0,0,0,0,0,0,0,0,0.474503990371703,0.609958401380546,0.324016022465404,0.418176592028937,0.436725127492355,0,0.165306911450672,0.26175594198403,0,0,0,10.7651913151665,8.93475848468327,3.50012139019286,3.48731523389874,1.85851738039856,0.469428954583016,0.13020438484395,0.524296722128554,0.241584120826006,2.01621004380506,0,0,0.718976700153791,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,4.14292712856459,6.30185064783336,2.40594455281163,2.74033007908257,0,1.35004500046361,0.900642406448441,0.906284817968409,1.55328093525546,0.103787347584177,2.79317411380722,5.80494259564056,4.61902762429759,2.09613162627982,0.919217542250071,0.222246727801615,1.03017528619447,0.64183841918363,1.51618327058278,1.01391719956096,1.32038438970253,0.561849044819294,0.384150914429216,0.459483751644906,0,0.579421629724277,0.578727661391115,0.824171801606613,0.883193520806384,1.37147700954166,0.887379030796687,0.238436189947321,0.581385666529314,0.564656282491984,0.930760686808441,0.73171189149109,0.263069711437843,0.679020569229309,0,0.474540072496697,0.788035859004508,1.22769312950907,0.929621047115796,5.20847849649082,2.74791635731741,2.57324769289949,1.93383948643468,7.84282161482258,11.4707537942148,5.79669589051054
|phase1_expression=37.314681375417,0,0,0,0,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,3.73466510648602,2.91644848611425,1.25987779462826,8.62515386189829,0,0,0,0,0,0,1.41621522601718,1.05798195854407,0,0,0.889294796111139,0,0,0,1.19840044207362,3.45796474789399,1.03689612308478,1.4850653216486,1.26194976810829,7.14127461009509,6.40518768759679,1.5923803897944,1.0543001812006,0,0,0.766124028511126,0.768032666281217,1.18697658957174,1.64677758484337,1.04182674111352,0.837548997004143,1.68828783009504,0.763991238884051,4.12480019663135,3.41692033917847,2.23679334990361,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,38.0277233397037,0,0,0,0,0,0,0,0,0,1.04091196059682,0.304465478312141,0.230615497256059,0.452167921657868,0.23517741427141,0,0,0,0.884610551949874,18.7649545938995,4.41683036920787,4.363877278217,0,0.292780797011547,1.04723353406728,0,0,0,0,1.49790639404823,0.915001205637253,4.02093926761166,0.695297280769106,1.27857728665165,1.45451631191692,2.43361894601636,0.101839363850316,3.23458123586242,0,0,0.390361328888111,0,0.540186389416048,3.16480117455002,6.5995404176788,4.99643509110914,3.37326208415024,2.58703370739016,0.862271971731369,4.16033376369202,5.10258260075452,11.3981780862339,8.34141747676794,4.87553033131033,8.43706759272568,3.78165106955137,0,0,0,0.828503090142008,1.87620847984877,0.180062061461015,0.946978942340841,0.983821158737019,0.154267112887378,0,0.268273401399619,0,0,0.164167464079095,0.0810688095458557,0,0,0,0.630869845692382,3.2929475961371,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0,0,0,0,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0,0,0,0.342745537829186,0,0.203651327845314,0.387904974335251,0.140271639780637,0,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,0,1.70542270593436,1.14075483509418,2.03694102930226,1.40814148973101,0.670025029767263,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0.491764273019036,0.827810238914197,0.321101179975584,1.05490517932983,0,1.26235463602186,0.94652465824877,0.780877488593277,1.72338718186239,1.43381278771531,0.668396022247182,1.13230612315533,3.64329631507405,0.584511715822624,0.790575555893047,0.642642632843614,0,0.534196811001766,0.488660878060728,0.164970122972535,0,1.69946445308487,3.62788268357701,1.50884063804718,1.77181135728464,2.15204603560749,0.775284879504663,2.54473610634254,1.42598951353889,0.316036757935816,0,0,0,2.34079422240703,0.905510786479282,1.07168517515796,1.59606210278046,0.891844088010353,1.81003922662333,0.304464949114599,0,0,0,0.32977250588296,0,0.361877549568935,0.238744688006273,0.328281799490123,0.291480836629851,1.11255181206306,0,0.206386867963223,0,0,0,0,0,0,0,0,0.474503990371703,0.609958401380546,0.324016022465404,0.418176592028937,0.436725127492355,0,0.165306911450672,0.26175594198403,0,0,0,10.7651913151665,8.93475848468327,3.50012139019286,3.48731523389874,1.85851738039856,0.469428954583016,0.13020438484395,0.524296722128554,0.241584120826006,2.01621004380506,0,0,0.718976700153791,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,4.14292712856459,6.30185064783336,2.40594455281163,2.74033007908257,0,1.35004500046361,0.900642406448441,0.906284817968409,1.55328093525546,0.103787347584177,2.79317411380722,5.80494259564056,4.61902762429759,2.09613162627982,0.919217542250071,0.222246727801615,1.03017528619447,0.64183841918363,1.51618327058278,1.01391719956096,1.32038438970253,0.561849044819294,0.384150914429216,0.459483751644906,0,0.579421629724277,0.578727661391115,0.824171801606613,0.883193520806384,1.37147700954166,0.887379030796687,0.238436189947321,0.581385666529314,0.564656282491984,0.930760686808441,0.73171189149109,0.263069711437843,0.679020569229309,0,0.474540072496697,0.788035859004508,1.22769312950907,0.929621047115796,5.20847849649082,2.74791635731741,2.57324769289949,1.93383948643468,7.84282161482258,11.4707537942148,5.79669589051054
|short_description=p2@Col9a3
}}
}}

Latest revision as of 07:39, 26 September 2015

Short description:p2@Col9a3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Col9a3_5end
Coexpression cluster:MCL_coexpression_mm9:1050
Association with transcript: 0bp_to_ENSMUST00000103059, ENSMUST00000171895, NM_009936, uc008ojl.1_5end
EntrezGene:Col9a3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Col9a3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G737.31
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G638.03
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F518.76
bone (os femoris), neonate N16.CNhs11225.1525-43A64.42
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F14.02
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.23
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C66.60
eyeball, neonate N01.CNhs11140.1532-43E75.00
eyeball, neonate N02.CNhs11205.1551-44G83.37
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H24.16
forelimb, embryo E13.CNhs10589.384-1E25.10
forelimb, embryo E14.CNhs10577.413-26A811.40
forelimb, embryo E15.CNhs11007.437-20E78.34
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B58.44
gonad, embryo E13.CNhs11044.1564-45I63.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G13.29
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C52.04
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F510.77
testis, embryo E15.CNhs11034.443-27C58.93
testis, embryo E16.CNhs11033.470-26G53.50
testis, embryo E17.CNhs11029.486-18I53.49
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H25.80
whole body, embryo E14.5.CNhs10578.420-27D24.62
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F95.21
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C67.84
whole body, neonate N06.CNhs10515.692-21D111.47
whole body, neonate N10.CNhs10518.761-6B45.80





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell2.34e-0944
neurectodermal cell2.34e-0944
neural cell1.37e-0843

Uber anatomy
Ontology termp-valuen
central nervous system5.97e-1473
neurectoderm1.50e-1364
neural plate1.50e-1364
presumptive neural plate1.50e-1364
nervous system3.25e-1375
ectoderm-derived structure1.31e-1295
ectoderm1.31e-1295
presumptive ectoderm1.31e-1295
ecto-epithelium1.63e-1273
neural tube3.71e-1252
neural rod3.71e-1252
future spinal cord3.71e-1252
neural keel3.71e-1252
regional part of nervous system1.39e-1054
gray matter1.61e-1034
pre-chordal neural plate3.43e-1049
anterior neural tube1.29e-0840
regional part of brain1.56e-0846
structure with developmental contribution from neural crest1.69e-0892
appendage2.50e-0812
paired limb/fin2.50e-0812
limb2.50e-0812
paired limb/fin bud2.50e-0812
limb bud2.50e-0812
limb/fin field2.50e-0812
limb field2.50e-0812
regional part of forebrain3.40e-0839
forebrain3.40e-0839
future forebrain3.40e-0839
brain3.49e-0847
future brain3.49e-0847
appendage girdle complex1.91e-0713
brain grey matter4.41e-0729
regional part of telencephalon4.41e-0729
telencephalon4.41e-0729
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