FFCP PHASE1:Mm9::chr2:32985986..32985999,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:32985986..32985999,-
|short_description=p@chr2:32985986..32985999,-
|description=CAGE_peak_at_chr2:32985986..32985999,-
|association_with_transcript=NA
|E...") |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:32985986..32985999,- | |||
|description=CAGE_peak_at_chr2:32985986..32985999,- | |||
|id=chr2:32985986..32985999,- | |||
|ontology_enrichment_celltype=CL:0000540!5.37e-11!33;CL:0000047!5.37e-11!33;CL:0000031!5.37e-11!33;CL:0000404!5.37e-11!33;CL:0000221!1.69e-08!44;CL:0000133!1.69e-08!44;CL:0002319!5.39e-08!43;CL:0000393!1.26e-07!39;CL:0000211!1.26e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.81e-20,33;CL:0000047,7.81e-20,33;CL:0000031,7.81e-20,33;CL:0000404,7.81e-20,33;CL:0000393,2.19e-16,39;CL:0000211,2.19e-16,39;CL:0002319,1.27e-14,43;CL:0000221,3.14e-14,44;CL:0000133,3.14e-14,44;CL:0002612,1.05e-12,3;CL:0000117,4.15e-12,23;CL:0000337,4.15e-12,23;CL:0000120,2.13e-11,3;CL:0000107,4.76e-10,9;CL:0002611,3.06e-09,2;CL:0002321,5.56e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.45e-16!75;UBERON:0001016!2.45e-16!75;UBERON:0001017!3.69e-16!73;UBERON:0005743!3.69e-16!73;UBERON:0004121!2.92e-14!102;UBERON:0000924!2.92e-14!102;UBERON:0006601!2.92e-14!102;UBERON:0002346!1.87e-12!71;UBERON:0003075!1.87e-12!71;UBERON:0007284!1.87e-12!71;UBERON:0001049!5.82e-11!52;UBERON:0005068!5.82e-11!52;UBERON:0006241!5.82e-11!52;UBERON:0007135!5.82e-11!52;UBERON:0000033!1.52e-09!63;UBERON:0000955!6.44e-09!50;UBERON:0006238!6.44e-09!50;UBERON:0002616!1.21e-08!49;UBERON:0002020!1.60e-08!34;UBERON:0002780!5.46e-08!39;UBERON:0001890!5.46e-08!39;UBERON:0006240!5.46e-08!39;UBERON:0003080!1.58e-07!40;UBERON:0003056!2.30e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,2.76e-20,5;UBERON:0002315,2.76e-20,5;UBERON:0001017,2.13e-19,73;UBERON:0001016,8.74e-19,75;UBERON:0002021,5.11e-18,10;UBERON:0000411,5.11e-18,10;UBERON:0001950,5.11e-18,10;UBERON:0002240,7.21e-17,6;UBERON:0005174,7.21e-17,6;UBERON:0001137,7.21e-17,6;UBERON:0002020,1.69e-14,34;UBERON:0004121,4.62e-14,95;UBERON:0000924,4.62e-14,95;UBERON:0006601,4.62e-14,95;UBERON:0002257,1.05e-12,3;UBERON:0002619,2.98e-10,17;UBERON:0002410,4.76e-10,9;UBERON:0000073,8.97e-10,54;UBERON:0002346,3.05e-09,64;UBERON:0003075,3.05e-09,64;UBERON:0007284,3.05e-09,64;UBERON:0002256,3.06e-09,2;UBERON:0001049,1.03e-08,52;UBERON:0005068,1.03e-08,52;UBERON:0006241,1.03e-08,52;UBERON:0007135,1.03e-08,52;UBERON:0003076,2.70e-08,12;UBERON:0003057,2.70e-08,12;UBERON:0000010,3.50e-08,11;UBERON:0000956,3.92e-08,21;UBERON:0001869,3.92e-08,21;UBERON:0000203,3.92e-08,21;UBERON:0010371,8.86e-08,73;UBERON:0010314,1.04e-07,92 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,1.21389876515759,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0.103689612308478,0.405017814995072,0.210324961351382,4.28476476605705,3.3130281142742,0,0.0958454710182364,0,0,1.0214987046815,0.307213066512487,0.791317726381163,0.731901148819277,0.52091337055676,0,0,0.45839474333043,1.76777151284201,4.9830088279686,3.16879057903011,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0.29688427812965,0.346970653532272,0,0.230615497256059,1.50722640552623,1.41106448562846,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0.11981512450592,0,0,0,0.457500602818626,0.879580464790051,0.173824320192276,1.02286182932132,0.20778804455956,0.648965052271031,0.203678727700633,0.124406970610093,0,0,0.260240885925407,0,0,0.30140963567143,0.136072998302656,0.12811372028485,0.281105173679186,0.517406741478031,0,0,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0.36012412292203,0.710234206755631,0.590292695242212,0.462801338662135,0,0,0.233530684734339,0,0,0,0.146199987425332,0,0.134206418760372,0,0.92614151141356,0,0.264450566663544,0,0,0.257734922644187,0,0.22237804384487,0.570676878337677,0,0.494096864172033,0.502670417600539,0.397912944082302,0.779856348476481,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0.575392274901621,0,0,0,0.744281895337007,0,0,0,0,0,0,0,0.339490171550376,0,0.502518772325447,0.238043640886014,0.195133647857799,0.157635144106191,0.44292937929755,0.318909537314974,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0.481651769963376,0.468846746368813,0,0,1.26203287766503,0,1.07711698866399,0.716906393857656,0.891194696329576,1.13230612315533,0.404810701674894,2.04579100537918,2.37172666767914,0.321321316421807,0,0,0.488660878060728,0,0,0,0,0.188605079755898,0.590603785761546,0,0.775284879504663,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0.540183282093931,0.258717367565509,0.643011105094777,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.540026704109006,0.209088296014469,0.218362563746178,0.404593039154462,0.495920734352016,0,0,0,0,0,0,0,0.129159823477731,0,0.234714477291508,0.2604087696879,0.943734099831398,0.966336483304024,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0.167884616364078,0,0,0.183151624267265,0,0,2.25900737046827,1.84130094602871,1.71868654031819,1.54667864109319,2.05524755931193,2.2661816921691,0,0,1.35942722695261,0.51776031175182,0,0,0.170733605754134,0,0.628839487883947,0.367687016900028,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.25347929989024,0.377252682772152,0.749132059759059,0.256100609619477,0.746661096422973,0,0.463537303779422,0,0,0.441596760403192,0,0.177475806159338,0,0.436039249896986,0.0941093804153306,0.338458431566706,0.182927972872773,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.29551344712669,0,0.309873682371932,0.578719832943424,0,0,0.644613162144895,0.57386499620653,0.220591419119515,0 | |phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,1.21389876515759,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0.103689612308478,0.405017814995072,0.210324961351382,4.28476476605705,3.3130281142742,0,0.0958454710182364,0,0,1.0214987046815,0.307213066512487,0.791317726381163,0.731901148819277,0.52091337055676,0,0,0.45839474333043,1.76777151284201,4.9830088279686,3.16879057903011,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0.29688427812965,0.346970653532272,0,0.230615497256059,1.50722640552623,1.41106448562846,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0.11981512450592,0,0,0,0.457500602818626,0.879580464790051,0.173824320192276,1.02286182932132,0.20778804455956,0.648965052271031,0.203678727700633,0.124406970610093,0,0,0.260240885925407,0,0,0.30140963567143,0.136072998302656,0.12811372028485,0.281105173679186,0.517406741478031,0,0,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0.36012412292203,0.710234206755631,0.590292695242212,0.462801338662135,0,0,0.233530684734339,0,0,0,0.146199987425332,0,0.134206418760372,0,0.92614151141356,0,0.264450566663544,0,0,0.257734922644187,0,0.22237804384487,0.570676878337677,0,0.494096864172033,0.502670417600539,0.397912944082302,0.779856348476481,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0.575392274901621,0,0,0,0.744281895337007,0,0,0,0,0,0,0,0.339490171550376,0,0.502518772325447,0.238043640886014,0.195133647857799,0.157635144106191,0.44292937929755,0.318909537314974,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0.481651769963376,0.468846746368813,0,0,1.26203287766503,0,1.07711698866399,0.716906393857656,0.891194696329576,1.13230612315533,0.404810701674894,2.04579100537918,2.37172666767914,0.321321316421807,0,0,0.488660878060728,0,0,0,0,0.188605079755898,0.590603785761546,0,0.775284879504663,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0.540183282093931,0.258717367565509,0.643011105094777,0.177340233642274,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.540026704109006,0.209088296014469,0.218362563746178,0.404593039154462,0.495920734352016,0,0,0,0,0,0,0,0.129159823477731,0,0.234714477291508,0.2604087696879,0.943734099831398,0.966336483304024,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0.167884616364078,0,0,0.183151624267265,0,0,2.25900737046827,1.84130094602871,1.71868654031819,1.54667864109319,2.05524755931193,2.2661816921691,0,0,1.35942722695261,0.51776031175182,0,0,0.170733605754134,0,0.628839487883947,0.367687016900028,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0.25347929989024,0.377252682772152,0.749132059759059,0.256100609619477,0.746661096422973,0,0.463537303779422,0,0,0.441596760403192,0,0.177475806159338,0,0.436039249896986,0.0941093804153306,0.338458431566706,0.182927972872773,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.29551344712669,0,0.309873682371932,0.578719832943424,0,0,0.644613162144895,0.57386499620653,0.220591419119515,0 | ||
|short_description=p@chr2:32985986..32985999,- | |||
}} | }} |
Latest revision as of 02:01, 5 August 2015
Short description: | p@chr2:32985986..32985999, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:32985986..32985999, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.81e-20 | 33 |
neuronal stem cell | 7.81e-20 | 33 |
neuroblast | 7.81e-20 | 33 |
electrically signaling cell | 7.81e-20 | 33 |
electrically responsive cell | 2.19e-16 | 39 |
electrically active cell | 2.19e-16 | 39 |
neural cell | 1.27e-14 | 43 |
ectodermal cell | 3.14e-14 | 44 |
neurectodermal cell | 3.14e-14 | 44 |
neuron of the ventral spinal cord | 1.05e-12 | 3 |
CNS neuron (sensu Vertebrata) | 4.15e-12 | 23 |
neuroblast (sensu Vertebrata) | 4.15e-12 | 23 |
granule cell | 2.13e-11 | 3 |
autonomic neuron | 4.76e-10 | 9 |
neuron of the dorsal spinal cord | 3.06e-09 | 2 |
embryonic cell | 5.56e-08 | 70 |