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FFCP PHASE1:Mm9::chr3:105255244..105255283,+: Difference between revisions

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(Created page with "{{FFCP |id=chr3:105255244..105255283,+ |short_description=p3@Kcnd3 |description=CAGE_peak_3_at_Kcnd3_5end |association_with_transcript=0bp_to_ENSMUST00000098761,NM_0010393...")
 
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{{FFCP
{{FFCP
|id=chr3:105255244..105255283,+
|DHSsupport=NA
|short_description=p3@Kcnd3
|DPIdataset=NA
|description=CAGE_peak_3_at_Kcnd3_5end
|association_with_transcript=0bp_to_ENSMUST00000098761,NM_001039347,uc008qux.1,uc008quy.1_5end
|EntrezGene=56543
|EntrezGene=56543
|HGNC=
|HGNC=
|MCL_coexpression_id=2356
|TSSclassifier=NA
|UniProt=Q9Z0V1,Q3UH54
|UniProt=Q9Z0V1,Q3UH54
|association_with_transcript=0bp_to_ENSMUST00000098761,NM_001039347,uc008qux.1,uc008quy.1_5end
|cluster_id=chr3:105255244..105255283,+
|description=CAGE_peak_3_at_Kcnd3_5end
|id=chr3:105255244..105255283,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!5.30e-15!71;UBERON:0003075!5.30e-15!71;UBERON:0007284!5.30e-15!71;UBERON:0000955!9.26e-13!50;UBERON:0006238!9.26e-13!50;UBERON:0001017!1.17e-12!73;UBERON:0005743!1.17e-12!73;UBERON:0000073!1.86e-12!75;UBERON:0001016!1.86e-12!75;UBERON:0002616!3.56e-12!49;UBERON:0000033!3.63e-12!63;UBERON:0004121!5.44e-12!102;UBERON:0000924!5.44e-12!102;UBERON:0006601!5.44e-12!102;UBERON:0001049!1.38e-11!52;UBERON:0005068!1.38e-11!52;UBERON:0006241!1.38e-11!52;UBERON:0007135!1.38e-11!52;UBERON:0005156!7.21e-10!26;UBERON:0000990!7.21e-10!26;UBERON:0003056!8.71e-10!49;UBERON:0003133!1.53e-09!24;UBERON:0000991!4.19e-09!18;UBERON:0005564!4.19e-09!18;UBERON:0003080!6.93e-09!40;UBERON:0004176!1.52e-08!17;UBERON:0009196!1.52e-08!17;UBERON:0009117!1.52e-08!17;UBERON:0003886!1.81e-08!38;UBERON:0002323!2.32e-08!37;UBERON:0004458!2.32e-08!37;UBERON:0002780!2.33e-08!39;UBERON:0001890!2.33e-08!39;UBERON:0006240!2.33e-08!39;UBERON:0002553!7.65e-08!39;UBERON:0000468!1.19e-07!333;UBERON:0002020!1.26e-07!34;UBERON:0003135!3.06e-07!15;UBERON:0000473!3.14e-07!14;UBERON:0003101!6.89e-07!16;UBERON:0000079!6.89e-07!16;UBERON:0002791!7.08e-07!29;UBERON:0003528!7.08e-07!29;UBERON:0001893!7.08e-07!29;UBERON:0000922!8.41e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0005156,9.65e-12,26;UBERON:0000990,9.65e-12,26;UBERON:0003133,1.13e-11,24;UBERON:0000991,2.50e-11,18;UBERON:0005564,2.50e-11,18;UBERON:0000073,3.14e-11,54;UBERON:0004176,1.44e-10,17;UBERON:0009196,1.44e-10,17;UBERON:0009117,1.44e-10,17;UBERON:0001017,2.27e-10,73;UBERON:0002346,6.22e-10,64;UBERON:0003075,6.22e-10,64;UBERON:0007284,6.22e-10,64;UBERON:0001016,1.01e-09,75;UBERON:0000955,1.13e-09,47;UBERON:0006238,1.13e-09,47;UBERON:0001049,1.29e-09,52;UBERON:0005068,1.29e-09,52;UBERON:0006241,1.29e-09,52;UBERON:0007135,1.29e-09,52;UBERON:0002616,4.99e-09,46;UBERON:0003135,8.35e-09,15;UBERON:0000473,9.01e-09,14;UBERON:0003886,4.57e-08,38;UBERON:0004121,5.06e-08,95;UBERON:0000924,5.06e-08,95;UBERON:0006601,5.06e-08,95;UBERON:0003101,5.85e-08,16;UBERON:0000079,5.85e-08,16;UBERON:0002323,6.54e-08,37;UBERON:0004458,6.54e-08,37;UBERON:0010371,1.16e-07,73;UBERON:0002553,1.19e-07,39;UBERON:0003056,2.51e-07,49;UBERON:0003080,7.71e-07,40;UBERON:0010314,9.03e-07,92
|phase1_expression=1.12104192973356,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96222640742402,1.97717564461025,3.30530828426282,0.839918529752175,1.43752564364972,0,0,0,0.257259436035947,0.573066879877513,0,2.63011399117477,1.5869729378161,0.633831403506179,0,0,0,0,0,0.898800331555214,1.53687322128622,0.829516898467821,0.675029691658453,1.05162480675691,1.14260393761521,1.76694832761291,0.489963196859816,0.575072826109418,0.919218786610021,5.50579404996943,4.97980618532232,3.37934373163736,2.37395317914349,1.28082701043374,0,1.67509799400829,2.25105044012672,3.51435969886663,0.883885756421003,1.99320353118744,0.559198337475902,0.605809546665472,0.302286240427142,1.15945795480671,0,0,0,0,0,0.421333260395256,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,1.63286352971307,1.73485326766136,0.913396434936424,1.15307748628029,1.65794904607885,2.23418543557839,0.879666139307728,1.48316980640624,0.722996784599558,0,0,0.220841518460394,0,1.86391761218122,9.9545470983926,8.79676168616511,0.510914110417183,0,0,0,4.19413790333504,2.28750301409313,0.879580464790051,1.56441888173049,2.04572365864264,5.194701113989,5.51620294430376,5.29564692021645,1.24406970610093,1.0108910337347,0.631325567659422,0,0.689706313300419,0.720248519221397,1.20563854268572,1.97305847538851,1.2811372028485,2.71735001223214,2.58703370739016,0,0.189106080167819,0.879755620819744,0.219195732427575,0.278047249225598,0,0.205782136407943,3.18454826909589,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.462801338662135,0.232533944750408,0,0.467061369468678,0.493679549740441,0.164167464079095,1.29710095273369,0.730999937126662,0.878200461164203,1.20785776884335,3.78521907415429,2.57261530948211,0,0.264450566663544,1.91959425481711,1.16118335930219,1.54640953586512,1.21010114774006,0.889512175379481,0.760902504450237,0.474529061544512,0.823494773620054,1.00534083520108,0.994782360205754,1.36474860983384,0.898819408654221,0.432276099749388,0.995706366271836,0.379335801906163,1.5994791765362,0,1.83286195060783,1.55161989734101,2.10407459670956,5.75452487830741,2.36176236767363,2.35498091762062,1.97435462274881,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0.624075346229121,0,0.179397413521912,0,0.739012760666419,0.189491411770485,0.162964976442026,0,0,0,0,0.390267295715598,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0.578596234326046,0,0,0,0.275936746304732,1.60550589987792,2.22702204525186,0,0,0.94652465824877,0.780877488593277,2.58508077279359,0,0,0.283076530788832,0,0,0,4.81981974632711,2.41298144854057,2.67098405500883,1.79175655288934,5.60898418106621,1.32745138339963,0.242780636154981,0.906970670894253,0.943025398779491,0.295301892880773,1.53717573971964,1.29214146584111,2.18120237686503,0,1.8962205476149,0,3.09406629744561,6.46835250932197,0.540183282093931,0.129358683782755,0.428674070063185,1.24138163549592,1.07021290561242,1.64549020602121,0.608929898229199,2.81606049676452,0,0.441056796109924,0,0.161464426695906,0.120625849856312,0,0.164140899745061,2.04036585640896,1.48340241608408,0.512612642393558,1.03193433981611,0.555583582109135,0.188368457004691,0.546776910884101,0.686334519619568,0.169978429993855,0.139951452323658,0.276399947608848,1.90934123603023,1.89801596148681,2.43983360552218,1.40406943068342,1.46361807210128,1.31017538247707,2.42755823492677,3.38879168473877,2.35580347785627,2.20345454596048,0,0.56369293868419,2.0932316446157,1.15820943319968,3.69457257853691,4.1331143512874,3.37912250981556,4.10750335260139,7.42164993610516,6.8158573876712,3.14059357073808,2.01621004380506,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,6.56844619709447,2.25218970541418,2.74727436400898,0.857473516316263,1.50471631210609,1.6942555278512,0.460325236507177,3.43737308063638,1.3748254587495,1.37016503954128,1.5107877947794,2.70009000092722,0.900642406448441,0.906284817968409,1.55328093525546,0.31136204275253,0,0.682934423016537,0.243106717068294,0.209613162627982,0.551530525350042,1.11123363900808,0.824140228955577,1.28367683836726,1.01078884705519,1.01391719956096,1.13175804831646,0.655490552289177,0.704276676453562,1.26358031702349,1.42888107384922,1.0429589335037,0.38581844092741,0.824171801606613,0.588795680537589,1.37147700954166,0.532427418478012,0.953744759789284,0.726732083161643,0.376437521661322,0.761531471025089,0.914639864363863,0.526139422875686,0.679020569229309,1.12228454331548,0.474540072496697,0.788035859004508,0,0.309873682371932,0.771626443924566,0.749431733813838,0.467863216890817,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421
|phase1_expression=1.12104192973356,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96222640742402,1.97717564461025,3.30530828426282,0.839918529752175,1.43752564364972,0,0,0,0.257259436035947,0.573066879877513,0,2.63011399117477,1.5869729378161,0.633831403506179,0,0,0,0,0,0.898800331555214,1.53687322128622,0.829516898467821,0.675029691658453,1.05162480675691,1.14260393761521,1.76694832761291,0.489963196859816,0.575072826109418,0.919218786610021,5.50579404996943,4.97980618532232,3.37934373163736,2.37395317914349,1.28082701043374,0,1.67509799400829,2.25105044012672,3.51435969886663,0.883885756421003,1.99320353118744,0.559198337475902,0.605809546665472,0.302286240427142,1.15945795480671,0,0,0,0,0,0.421333260395256,0,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,1.63286352971307,1.73485326766136,0.913396434936424,1.15307748628029,1.65794904607885,2.23418543557839,0.879666139307728,1.48316980640624,0.722996784599558,0,0,0.220841518460394,0,1.86391761218122,9.9545470983926,8.79676168616511,0.510914110417183,0,0,0,4.19413790333504,2.28750301409313,0.879580464790051,1.56441888173049,2.04572365864264,5.194701113989,5.51620294430376,5.29564692021645,1.24406970610093,1.0108910337347,0.631325567659422,0,0.689706313300419,0.720248519221397,1.20563854268572,1.97305847538851,1.2811372028485,2.71735001223214,2.58703370739016,0,0.189106080167819,0.879755620819744,0.219195732427575,0.278047249225598,0,0.205782136407943,3.18454826909589,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.462801338662135,0.232533944750408,0,0.467061369468678,0.493679549740441,0.164167464079095,1.29710095273369,0.730999937126662,0.878200461164203,1.20785776884335,3.78521907415429,2.57261530948211,0,0.264450566663544,1.91959425481711,1.16118335930219,1.54640953586512,1.21010114774006,0.889512175379481,0.760902504450237,0.474529061544512,0.823494773620054,1.00534083520108,0.994782360205754,1.36474860983384,0.898819408654221,0.432276099749388,0.995706366271836,0.379335801906163,1.5994791765362,0,1.83286195060783,1.55161989734101,2.10407459670956,5.75452487830741,2.36176236767363,2.35498091762062,1.97435462274881,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0.624075346229121,0,0.179397413521912,0,0.739012760666419,0.189491411770485,0.162964976442026,0,0,0,0,0.390267295715598,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0.578596234326046,0,0,0,0.275936746304732,1.60550589987792,2.22702204525186,0,0,0.94652465824877,0.780877488593277,2.58508077279359,0,0,0.283076530788832,0,0,0,4.81981974632711,2.41298144854057,2.67098405500883,1.79175655288934,5.60898418106621,1.32745138339963,0.242780636154981,0.906970670894253,0.943025398779491,0.295301892880773,1.53717573971964,1.29214146584111,2.18120237686503,0,1.8962205476149,0,3.09406629744561,6.46835250932197,0.540183282093931,0.129358683782755,0.428674070063185,1.24138163549592,1.07021290561242,1.64549020602121,0.608929898229199,2.81606049676452,0,0.441056796109924,0,0.161464426695906,0.120625849856312,0,0.164140899745061,2.04036585640896,1.48340241608408,0.512612642393558,1.03193433981611,0.555583582109135,0.188368457004691,0.546776910884101,0.686334519619568,0.169978429993855,0.139951452323658,0.276399947608848,1.90934123603023,1.89801596148681,2.43983360552218,1.40406943068342,1.46361807210128,1.31017538247707,2.42755823492677,3.38879168473877,2.35580347785627,2.20345454596048,0,0.56369293868419,2.0932316446157,1.15820943319968,3.69457257853691,4.1331143512874,3.37912250981556,4.10750335260139,7.42164993610516,6.8158573876712,3.14059357073808,2.01621004380506,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,6.56844619709447,2.25218970541418,2.74727436400898,0.857473516316263,1.50471631210609,1.6942555278512,0.460325236507177,3.43737308063638,1.3748254587495,1.37016503954128,1.5107877947794,2.70009000092722,0.900642406448441,0.906284817968409,1.55328093525546,0.31136204275253,0,0.682934423016537,0.243106717068294,0.209613162627982,0.551530525350042,1.11123363900808,0.824140228955577,1.28367683836726,1.01078884705519,1.01391719956096,1.13175804831646,0.655490552289177,0.704276676453562,1.26358031702349,1.42888107384922,1.0429589335037,0.38581844092741,0.824171801606613,0.588795680537589,1.37147700954166,0.532427418478012,0.953744759789284,0.726732083161643,0.376437521661322,0.761531471025089,0.914639864363863,0.526139422875686,0.679020569229309,1.12228454331548,0.474540072496697,0.788035859004508,0,0.309873682371932,0.771626443924566,0.749431733813838,0.467863216890817,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421
|short_description=p3@Kcnd3
}}
}}

Latest revision as of 06:02, 27 September 2015

Short description:p3@Kcnd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Kcnd3_5end
Coexpression cluster:MCL_coexpression_mm9:2356
Association with transcript: 0bp_to_ENSMUST00000098761, NM_001039347, uc008qux.1, uc008quy.1_5end
EntrezGene:Kcnd3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Kcnd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C12.23
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B29.95
cerebellum, neonate N30.CNhs11135.1395-42I28.80
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F25.19
diencephalon, neonate N30.CNhs11201.1388-42B25.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.30
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.97
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G82.72
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I63.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G11.30
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G72.10
kidney, neonate N10.CNhs11206.758-6D55.75
kidney, neonate N20.CNhs11113.832-19I12.36
kidney, neonate N25.CNhs11122.1353-25F32.35
kidney, neonate N30.CNhs11203.1385-42H11.97
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G65.61
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I72.82
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B82.43
stomach, neonate N07.CNhs11210.718-18A93.39
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I12.20
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G53.69
testis, embryo E17.CNhs11029.486-18I54.13
testis, embryo E18.CNhs11027.503-18G53.38
testis, neonate N00.CNhs11189.1300-22B74.11
testis, neonate N07.CNhs11222.726-26I47.42
testis, neonate N10.CNhs11204.763-44D96.82
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E46.57
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
reproductive structure9.65e-1226
reproductive system9.65e-1226
reproductive organ1.13e-1124
gonad2.50e-1118
gonad primordium2.50e-1118
regional part of nervous system3.14e-1154
external genitalia1.44e-1017
indifferent external genitalia1.44e-1017
indifferent gonad1.44e-1017
central nervous system2.27e-1073
neurectoderm6.22e-1064
neural plate6.22e-1064
presumptive neural plate6.22e-1064
nervous system1.01e-0975
brain1.13e-0947
future brain1.13e-0947
neural tube1.29e-0952
neural rod1.29e-0952
future spinal cord1.29e-0952
neural keel1.29e-0952
regional part of brain4.99e-0946
male reproductive organ8.35e-0915
testis9.01e-0914
body cavity precursor4.57e-0838
ectoderm-derived structure5.06e-0895
ectoderm5.06e-0895
presumptive ectoderm5.06e-0895
male organism5.85e-0816
male reproductive system5.85e-0816
body cavity6.54e-0837
body cavity or lining6.54e-0837
ecto-epithelium1.16e-0773
anatomical cavity1.19e-0739
pre-chordal neural plate2.51e-0749
anterior neural tube7.71e-0740
structure with developmental contribution from neural crest9.03e-0792
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