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FFCP PHASE1:Mm9::chr3:53959961..53959996,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:53959961..53959996,+
|DHSsupport=NA
|short_description=p1@Trpc4
|DPIdataset=NA
|description=CAGE_peak_1_at_Trpc4_5end
|association_with_transcript=0bp_to_ENSMUST00000108005,NM_001253682,NM_001253683,NM_016984_5end
|EntrezGene=22066
|EntrezGene=22066
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9QUQ5,Q0VB97
|UniProt=Q9QUQ5,Q0VB97
|association_with_transcript=0bp_to_ENSMUST00000108005,NM_001253682,NM_001253683,NM_016984_5end
|cluster_id=chr3:53959961..53959996,+
|description=CAGE_peak_1_at_Trpc4_5end
|id=chr3:53959961..53959996,+
|ontology_enrichment_celltype=CL:0000117!4.31e-11!23;CL:0000337!4.31e-11!23;CL:0000540!3.84e-09!33;CL:0000047!3.84e-09!33;CL:0000031!3.84e-09!33;CL:0000404!3.84e-09!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.12e-12,23;CL:0000337,1.12e-12,23;CL:0000540,1.15e-09,33;CL:0000047,1.15e-09,33;CL:0000031,1.15e-09,33;CL:0000404,1.15e-09,33;CL:0000393,4.88e-07,39;CL:0000211,4.88e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!1.60e-18!50;UBERON:0006238!1.60e-18!50;UBERON:0001049!2.06e-18!52;UBERON:0005068!2.06e-18!52;UBERON:0006241!2.06e-18!52;UBERON:0007135!2.06e-18!52;UBERON:0003056!2.42e-18!49;UBERON:0000033!2.47e-18!63;UBERON:0001017!4.87e-18!73;UBERON:0005743!4.87e-18!73;UBERON:0002616!8.75e-18!49;UBERON:0002346!1.18e-17!71;UBERON:0003075!1.18e-17!71;UBERON:0007284!1.18e-17!71;UBERON:0000073!2.45e-17!75;UBERON:0001016!2.45e-17!75;UBERON:0003080!5.44e-17!40;UBERON:0002020!1.46e-16!34;UBERON:0002780!1.66e-16!39;UBERON:0001890!1.66e-16!39;UBERON:0006240!1.66e-16!39;UBERON:0004121!1.99e-15!102;UBERON:0000924!1.99e-15!102;UBERON:0006601!1.99e-15!102;UBERON:0002791!8.09e-15!29;UBERON:0003528!8.09e-15!29;UBERON:0001893!8.09e-15!29;UBERON:0000956!6.49e-11!21;UBERON:0001869!6.49e-11!21;UBERON:0000203!6.49e-11!21;UBERON:0002619!3.34e-09!17;UBERON:0000468!1.45e-08!333;UBERON:0000153!4.90e-08!94;UBERON:0007811!7.53e-08!86;UBERON:0002021!2.74e-07!10;UBERON:0000411!2.74e-07!10;UBERON:0001950!2.74e-07!10;UBERON:0000922!4.46e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.53e-21,54;UBERON:0002346,2.67e-20,64;UBERON:0003075,2.67e-20,64;UBERON:0007284,2.67e-20,64;UBERON:0001049,2.30e-19,52;UBERON:0005068,2.30e-19,52;UBERON:0006241,2.30e-19,52;UBERON:0007135,2.30e-19,52;UBERON:0003056,5.60e-19,49;UBERON:0001017,7.46e-19,73;UBERON:0002020,4.62e-18,34;UBERON:0003080,5.84e-18,40;UBERON:0000955,1.04e-17,47;UBERON:0006238,1.04e-17,47;UBERON:0001016,1.05e-17,75;UBERON:0002780,2.11e-17,39;UBERON:0001890,2.11e-17,39;UBERON:0006240,2.11e-17,39;UBERON:0002616,6.82e-17,46;UBERON:0003528,5.10e-16,29;UBERON:0002791,5.10e-16,29;UBERON:0001893,5.10e-16,29;UBERON:0004121,9.00e-16,95;UBERON:0000924,9.00e-16,95;UBERON:0006601,9.00e-16,95;UBERON:0010371,1.12e-15,73;UBERON:0000956,1.72e-11,21;UBERON:0001869,1.72e-11,21;UBERON:0000203,1.72e-11,21;UBERON:0002619,1.69e-09,17;UBERON:0010314,8.11e-09,92;UBERON:0002021,3.03e-08,10;UBERON:0000411,3.03e-08,10;UBERON:0001950,3.03e-08,10
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0.159992422793407,0.45881856213434,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.219686182734472,0.777719596297134,0.139986421625363,0,0,0,0,0,0.286533439938757,1.03134418455488,3.84401275633236,4.23192783417626,6.33831403506179,0,0,0,0,0,0,0,3.52544681848824,3.78016627328734,3.36519938162211,2.85650984403804,1.76694832761291,5.87955836231779,5.17565543498476,5.51531271966013,4.40463523997555,4.21368215681119,4.6081959976873,3.29715719325485,2.74462930807229,3.12548022334056,5.862842979029,9.56696437053856,7.94550888439413,5.59794312399969,7.83044244395066,3.16879057903011,0.075726193333184,0.226714680320357,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.445326417194474,0.346970653532272,0.304465478312141,0,0.60289056221049,0.823120949949934,0.125666591329675,0.247194967734374,0.722996784599558,0,0,0.220841518460394,0,1.86391761218122,1.17112318804619,1.25668024088073,1.27728527604296,0,0,0,4.19413790333504,9.60751265919116,7.53926112677186,6.77914848749878,9.71718737855256,10.5971902725376,9.73447578406546,2.85150218780886,0,0,1.05220927943237,2.34216797332867,0.919608417733892,1.44049703844279,1.35634336052144,1.7009124787832,3.33095672740609,3.84177070694888,10.6068382002996,0.646703978798527,3.02569728268511,2.28736461413134,2.6303487891309,3.33656699070717,0,1.02891068203972,0.995171334092466,0,0,0,1.03562886267751,0.469052119962192,0.540186184383045,0.23674473558521,0,0,0.232533944750408,0,0.350296027101508,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,18.7158054222073,18.7286394530298,0.330418782983798,1.32225283331772,5.54549451391608,7.19933682767359,3.09281907173024,3.83198696784351,5.33707305227689,2.28270751335071,0.949058123089023,2.79988223030818,3.77002813200404,3.97912944082302,3.50935356814416,1.79763881730844,2.16138049874694,0.995706366271836,0,1.25673363870702,0,0.814605311381257,0.581857461502877,0.98190147846446,0.885311519739602,1.18088118383682,0.470996183524124,0.740382983530803,0,0.333690211432188,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0.472905432318573,0.221464689648775,0.159454768657487,0.327726629431476,0,0,0,0,0,0,4.65596710964597,1.87538698547525,0,0,2.2085575359138,0.390438744296638,1.72338718186239,0,0.445597348164788,0.566153061577665,1.61924280669958,2.04579100537918,5.13874111330481,26.0270266301664,8.65834519770439,1.06839362200353,2.76907830901079,13.0326397148303,0,2.6705869977048,1.209294227859,1.32023555829129,0.885905678642318,1.84461088766356,1.03371317267288,1.09060118843252,0.712994756769443,1.8962205476149,1.05418608574999,0,3.06395645178409,1.62054984628179,0.905510786479282,1.50035924522115,1.59606210278046,1.78368817602071,2.79733335023606,2.43571959291679,3.98941903708308,0.63549621259146,0.441056796109924,1.81374878235628,0.645857706783622,0.663442174209714,0.596861720015682,0.328281799490123,3.20628920292836,2.59595422814714,0,1.23832120777933,0.555583582109135,0.188368457004691,0.136694227721025,0,0,0,0,0,2.05618395827738,2.03319467126849,1.40406943068342,3.3454127362315,3.49380101993884,4.85511646985355,5.86839535649885,3.14107130380836,4.01806417204558,1.24267862617385,0,0.448549638131936,0.165458490457098,2.33341426012857,2.32487682259916,3.04121025883401,2.93393096614385,0.2604087696879,0.209718688851422,0,0,0,0.405450430580328,0.718976700153791,1.03936658382236,0.358053391334963,0,0,0.147689527174577,0,0.15241361331,0,0,0,0,1.13365191807606,0,0,0,1.54551675225752,9.19644129710792,12.8206136987086,4.93047271881851,0,12.4245405375755,14.7304075682297,13.1765968091061,11.5141632170271,8.22099023724771,12.0863023582352,2.02506750069542,8.10578165803597,9.06284817968409,9.31968561153276,0.830298780673413,2.39414924040619,3.07320490357441,2.91728060481953,1.67690530102386,1.83843508450014,1.33348036680969,2.88449080134452,3.20919209591815,1.76888048234658,2.5347929989024,3.2066478035633,1.96647165686753,2.56100609619477,2.92920891673628,2.38146845641537,1.73826488917283,4.24400285020151,2.47251540481984,2.20798380201596,2.40008476669791,2.8396128985494,3.57654284920981,3.0522747492789,3.3879376949519,2.876896668317,1.46342378298218,3.94604567156764,1.62964936615034,2.24456908663095,2.37270036248348,1.87158516513571,1.22769312950907,3.09873682371932,2.70069255373598,5.24602213669686,2.57324769289949,2.57845264857958,0.57386499620653,0.441182838239031,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0.159992422793407,0.45881856213434,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.219686182734472,0.777719596297134,0.139986421625363,0,0,0,0,0,0.286533439938757,1.03134418455488,3.84401275633236,4.23192783417626,6.33831403506179,0,0,0,0,0,0,0,3.52544681848824,3.78016627328734,3.36519938162211,2.85650984403804,1.76694832761291,5.87955836231779,5.17565543498476,5.51531271966013,4.40463523997555,4.21368215681119,4.6081959976873,3.29715719325485,2.74462930807229,3.12548022334056,5.862842979029,9.56696437053856,7.94550888439413,5.59794312399969,7.83044244395066,3.16879057903011,0.075726193333184,0.226714680320357,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.445326417194474,0.346970653532272,0.304465478312141,0,0.60289056221049,0.823120949949934,0.125666591329675,0.247194967734374,0.722996784599558,0,0,0.220841518460394,0,1.86391761218122,1.17112318804619,1.25668024088073,1.27728527604296,0,0,0,4.19413790333504,9.60751265919116,7.53926112677186,6.77914848749878,9.71718737855256,10.5971902725376,9.73447578406546,2.85150218780886,0,0,1.05220927943237,2.34216797332867,0.919608417733892,1.44049703844279,1.35634336052144,1.7009124787832,3.33095672740609,3.84177070694888,10.6068382002996,0.646703978798527,3.02569728268511,2.28736461413134,2.6303487891309,3.33656699070717,0,1.02891068203972,0.995171334092466,0,0,0,1.03562886267751,0.469052119962192,0.540186184383045,0.23674473558521,0,0,0.232533944750408,0,0.350296027101508,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,18.7158054222073,18.7286394530298,0.330418782983798,1.32225283331772,5.54549451391608,7.19933682767359,3.09281907173024,3.83198696784351,5.33707305227689,2.28270751335071,0.949058123089023,2.79988223030818,3.77002813200404,3.97912944082302,3.50935356814416,1.79763881730844,2.16138049874694,0.995706366271836,0,1.25673363870702,0,0.814605311381257,0.581857461502877,0.98190147846446,0.885311519739602,1.18088118383682,0.470996183524124,0.740382983530803,0,0.333690211432188,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0.472905432318573,0.221464689648775,0.159454768657487,0.327726629431476,0,0,0,0,0,0,4.65596710964597,1.87538698547525,0,0,2.2085575359138,0.390438744296638,1.72338718186239,0,0.445597348164788,0.566153061577665,1.61924280669958,2.04579100537918,5.13874111330481,26.0270266301664,8.65834519770439,1.06839362200353,2.76907830901079,13.0326397148303,0,2.6705869977048,1.209294227859,1.32023555829129,0.885905678642318,1.84461088766356,1.03371317267288,1.09060118843252,0.712994756769443,1.8962205476149,1.05418608574999,0,3.06395645178409,1.62054984628179,0.905510786479282,1.50035924522115,1.59606210278046,1.78368817602071,2.79733335023606,2.43571959291679,3.98941903708308,0.63549621259146,0.441056796109924,1.81374878235628,0.645857706783622,0.663442174209714,0.596861720015682,0.328281799490123,3.20628920292836,2.59595422814714,0,1.23832120777933,0.555583582109135,0.188368457004691,0.136694227721025,0,0,0,0,0,2.05618395827738,2.03319467126849,1.40406943068342,3.3454127362315,3.49380101993884,4.85511646985355,5.86839535649885,3.14107130380836,4.01806417204558,1.24267862617385,0,0.448549638131936,0.165458490457098,2.33341426012857,2.32487682259916,3.04121025883401,2.93393096614385,0.2604087696879,0.209718688851422,0,0,0,0.405450430580328,0.718976700153791,1.03936658382236,0.358053391334963,0,0,0.147689527174577,0,0.15241361331,0,0,0,0,1.13365191807606,0,0,0,1.54551675225752,9.19644129710792,12.8206136987086,4.93047271881851,0,12.4245405375755,14.7304075682297,13.1765968091061,11.5141632170271,8.22099023724771,12.0863023582352,2.02506750069542,8.10578165803597,9.06284817968409,9.31968561153276,0.830298780673413,2.39414924040619,3.07320490357441,2.91728060481953,1.67690530102386,1.83843508450014,1.33348036680969,2.88449080134452,3.20919209591815,1.76888048234658,2.5347929989024,3.2066478035633,1.96647165686753,2.56100609619477,2.92920891673628,2.38146845641537,1.73826488917283,4.24400285020151,2.47251540481984,2.20798380201596,2.40008476669791,2.8396128985494,3.57654284920981,3.0522747492789,3.3879376949519,2.876896668317,1.46342378298218,3.94604567156764,1.62964936615034,2.24456908663095,2.37270036248348,1.87158516513571,1.22769312950907,3.09873682371932,2.70069255373598,5.24602213669686,2.57324769289949,2.57845264857958,0.57386499620653,0.441182838239031,0
|short_description=p1@Trpc4
}}
}}

Latest revision as of 14:21, 25 September 2015

Short description:p1@Trpc4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Trpc4_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000108005, NM_001253682, NM_001253683, NM_016984_5end
EntrezGene:Trpc4
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Trpc4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C33.84
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.53
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.18
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.95
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D89.61
corpus striatum, neonate N00.CNhs11226.630-43F17.54
cortex, adult.CNhs10473.12-14D56.78
cortex, neonate N30.CNhs11107.1392-42F29.72
diencephalon, adult.CNhs10482.20-12F210.60
diencephalon, neonate N30.CNhs11201.1388-42B29.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.85
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C62.34
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G83.84
eyeball, neonate N16.CNhs11188.777-19A210.61
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E818.72
hippocampus, neonate N00.CNhs11228.627-43G118.73
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I55.55
intestine, embryo E13.CNhs11010.381-16D57.20
intestine, embryo E15.CNhs10602.976-16D83.09
intestine, embryo E16.CNhs10585.463-22H43.83
intestine, embryo E17.CNhs10582.482-18D35.34
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E92.80
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F23.98
intestine, neonate N10.CNhs11098.755-23A53.51
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D50.89
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.66
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I926.03
ovary, adult.CNhs10507.91-2I78.66
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G613.03
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I73.99
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B84.86
stomach, neonate N07.CNhs11210.718-18A95.87
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I14.02
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B72.93
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F59.20
uterus, adult.CNhs10509.92-27E512.82
vagina, adult.CNhs10502.89-27D54.93
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.42
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.73
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.51
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.06
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.32
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.12e-1223
neuroblast (sensu Vertebrata)1.12e-1223
neuron1.15e-0933
neuronal stem cell1.15e-0933
neuroblast1.15e-0933
electrically signaling cell1.15e-0933
electrically responsive cell4.88e-0739
electrically active cell4.88e-0739

Uber anatomy
Ontology termp-valuen
regional part of nervous system7.53e-2154
neurectoderm2.67e-2064
neural plate2.67e-2064
presumptive neural plate2.67e-2064
neural tube2.30e-1952
neural rod2.30e-1952
future spinal cord2.30e-1952
neural keel2.30e-1952
pre-chordal neural plate5.60e-1949
central nervous system7.46e-1973
gray matter4.62e-1834
anterior neural tube5.84e-1840
brain1.04e-1747
future brain1.04e-1747
nervous system1.05e-1775
regional part of forebrain2.11e-1739
forebrain2.11e-1739
future forebrain2.11e-1739
regional part of brain6.82e-1746
brain grey matter5.10e-1629
regional part of telencephalon5.10e-1629
telencephalon5.10e-1629
ectoderm-derived structure9.00e-1695
ectoderm9.00e-1695
presumptive ectoderm9.00e-1695
ecto-epithelium1.12e-1573
cerebral cortex1.72e-1121
cerebral hemisphere1.72e-1121
pallium1.72e-1121
regional part of cerebral cortex1.69e-0917
structure with developmental contribution from neural crest8.11e-0992
occipital lobe3.03e-0810
visual cortex3.03e-0810
neocortex3.03e-0810
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