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FFCP PHASE1:Mm9::chr4:65266018..65266086,+: Difference between revisions

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(Created page with "{{FFCP |id=chr4:65266018..65266086,+ |short_description=p1@Trim32 |description=CAGE_peak_1_at_Trim32_5end |association_with_transcript=0bp_to_ENSMUST00000050850,ENSMUST000...")
 
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{{FFCP
{{FFCP
|id=chr4:65266018..65266086,+
|DHSsupport=NA
|short_description=p1@Trim32
|DPIdataset=NA
|description=CAGE_peak_1_at_Trim32_5end
|association_with_transcript=0bp_to_ENSMUST00000050850,ENSMUST00000107366,NM_001161782,NM_053084,uc008thq.2,uc008thr.2_5end
|EntrezGene=69807
|EntrezGene=69807
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8CH72,Q3TLR3
|UniProt=Q8CH72,Q3TLR3
|association_with_transcript=0bp_to_ENSMUST00000050850,ENSMUST00000107366,NM_001161782,NM_053084,uc008thq.2,uc008thr.2_5end
|cluster_id=chr4:65266018..65266086,+
|description=CAGE_peak_1_at_Trim32_5end
|id=chr4:65266018..65266086,+
|ontology_enrichment_celltype=CL:0000540!1.45e-15!33;CL:0000047!1.45e-15!33;CL:0000031!1.45e-15!33;CL:0000404!1.45e-15!33;CL:0000393!6.38e-14!39;CL:0000211!6.38e-14!39;CL:0000117!1.28e-13!23;CL:0000337!1.28e-13!23;CL:0000221!7.62e-13!44;CL:0000133!7.62e-13!44;CL:0002319!1.20e-12!43;CL:0000055!4.16e-11!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.45e-15,33;CL:0000047,1.45e-15,33;CL:0000031,1.45e-15,33;CL:0000404,1.45e-15,33;CL:0000393,6.38e-14,39;CL:0000211,6.38e-14,39;CL:0000117,1.28e-13,23;CL:0000337,1.28e-13,23;CL:0000221,7.62e-13,44;CL:0000133,7.62e-13,44;CL:0002319,1.20e-12,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.51e-29,73;UBERON:0001016,7.25e-29,75;UBERON:0002346,1.94e-27,64;UBERON:0003075,1.94e-27,64;UBERON:0007284,1.94e-27,64;UBERON:0004121,7.14e-26,95;UBERON:0000924,7.14e-26,95;UBERON:0006601,7.14e-26,95;UBERON:0000073,2.48e-25,54;UBERON:0001049,9.46e-24,52;UBERON:0005068,9.46e-24,52;UBERON:0006241,9.46e-24,52;UBERON:0007135,9.46e-24,52;UBERON:0010371,3.68e-23,73;UBERON:0010314,2.34e-22,92;UBERON:0003056,2.47e-21,49;UBERON:0000955,8.02e-21,47;UBERON:0006238,8.02e-21,47;UBERON:0002616,2.46e-20,46;UBERON:0002020,6.11e-19,34;UBERON:0003080,1.20e-18,40;UBERON:0002780,5.08e-18,39;UBERON:0001890,5.08e-18,39;UBERON:0006240,5.08e-18,39;UBERON:0003528,3.15e-16,29;UBERON:0002791,3.15e-16,29;UBERON:0001893,3.15e-16,29;UBERON:0000956,2.52e-11,21;UBERON:0001869,2.52e-11,21;UBERON:0000203,2.52e-11,21;UBERON:0000922,1.60e-09,320;UBERON:0002619,2.23e-09,17;UBERON:0002021,1.07e-07,10;UBERON:0000411,1.07e-07,10;UBERON:0001950,1.07e-07,10
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|phase1_expression=13.9329496981171,8.02643437570531,4.09499315450582,7.86406949397758,8.5152274090879,7.55456723603504,9.34450562382103,5.68142623142936,10.13678799492,12.6394844213876,11.1291679346578,9.33334260245436,4.10881751834894,5.85716696207283,0.666219523631325,1.01237633694913,0.699561878128147,1.89277299214943,2.87940310572051,2.54633791078818,17.6039610612714,5.26242041364692,5.22399578277871,8.15961356246374,7.11168771308227,7.46501553349526,4.73838195774982,6.46413698057667,6.65081968097309,5.79669298447841,3.99114919179548,5.08024538767705,2.46025915033828,0,7.79899373328441,11.9688944658114,6.73758875665818,0,0,0.523523743973798,0,0,1.94204141212461,12.9673722514845,11.1514624341466,10.8292583775392,12.5182615095686,9.59310688073965,12.0827400503959,10.6936444490856,9.23910382727393,5.75010257459886,1.8456086666351,5.07753499407941,3.6970317905671,7.46052364504246,9.45560351797897,12.3761302146586,51.9953304409166,66.6528633882761,51.9741750875067,15.5868484751801,12.450127145556,9.44894703145469,9.88866362566974,8.5257613793532,11.3848041996994,10.7581125490035,36.1876746956587,31.7263955079473,31.5487442027073,58.5584518027797,44.6154452722259,33.5624789848974,35.8462061608204,39.5264078242309,63.8672109796454,63.8436690425939,64.6683505008785,56.8429900117135,60.290357133988,46.3612899795516,67.0039197603314,63.0294123235482,62.0360885973849,45.3728021629448,43.8504776861237,52.5646437227348,9.92013132664711,11.4113055761246,13.0439019915755,6.0229671388697,4.75979933595425,6.47643829965381,5.84798775702902,2.68816132258401,7.5839986871146,5.62420064507591,9.87186817490901,9.54016851177919,14.5068722369981,8.98285341900225,10.1922095882658,0,5.62876706629157,5.32055717497707,6.57181778519218,4.90990682791958,2.07150306917737,12.0238132642508,14.7462527751215,12.7875500891099,10.8389283710347,13.565037649736,12.6995803706561,15.8339905075391,8.15743393523434,9.10975948595443,0.884610551949874,6.95597454773859,4.41683036920787,2.90925151881133,7.45567044872489,53.5788858531131,44.4027018444525,6.38642638021478,3.11519323715393,2.39961092397363,3.04968544975355,59.0175119255001,52.612569324142,74.13606774659,68.6606064759492,79.2717917724025,54.2326796300452,51.5927216555469,15.785101396799,4.97627882440372,5.81262344397452,20.2024181651015,16.1349349273753,20.6911893990126,16.5657159420921,16.7282347797644,13.8114093277196,17.6796933993093,16.6789069716317,15.5222022443409,18.3232793992916,16.2631228944325,15.4836989264275,15.5628970023578,11.9560317167007,12.1888258282758,8.43706759272568,17.9130840136644,4.21327912387941,2.57347907114715,2.84163499395593,12.2204205795946,12.195355119017,9.36322719597277,12.0739815148457,11.0187969778546,9.10175966035532,14.1845706297749,9.38956904898667,9.45799273174073,10.8609500942897,8.20837320395476,7.21512404958116,6.72519942156529,7.24515380460467,6.84452735677896,54.465096678109,48.2622632058844,4.95628174475697,6.61126416658861,14.7168892869311,13.4697269679054,12.6290112095651,10.0841762311671,8.67274370994994,12.7451169495415,11.3886974770683,7.74085087202851,9.80207314321051,9.94782360205754,10.1381325301942,13.4822911298133,7.99710784536369,9.35963984295526,16.6907752838712,13.9383185383869,4.50830942692322,13.2373363099454,12.0250542043928,11.1515953625607,10.4972651626267,11.0707610984702,8.63493003127561,7.52722699922983,7.11486305009157,3.67059232575407,2.16214894624523,2.69834534861824,2.43432145666204,3.61765739628625,5.34714288740982,4.31544206176216,2.59416362840057,3.56929837144506,8.62609239164127,5.58211421502755,8.7370548472077,8.33510297225469,6.27890947326693,7.23665282045051,6.09685527549795,16.6752442358027,12.87423313892,11.5426658327128,11.0304416695596,7.87279409976534,10.9500074807566,9.17128144931655,9.14283835815908,8.858587585951,13.8725648732014,7.70157579163969,8.97961905702657,9.11289069063523,10.5553898757491,3.80733978673097,4.42587845717133,9.10591262805617,47.3624240463986,43.3683240391152,22.9508923527346,6.31177318010932,15.4599027513966,13.2749173060857,17.8801420118223,16.7278158566786,20.943075363745,18.3999745012741,13.3587531552715,16.0740721851222,14.2303600060748,32.7747742750243,13.4843080947855,16.9162323483892,16.125808976004,12.8676695918578,2.65490276679926,13.110154352369,10.883648050731,7.54420319023592,8.26845300066164,6.7635732547664,7.23599220871019,7.99774204850512,7.84294232446387,5.37262488490887,3.16255825724996,6.18813259489121,8.5109901438447,15.3051929926614,17.9808570458029,17.5756368725906,13.4778577568128,12.664186049747,16.7840001014163,15.5277124048446,4.22409074514679,7.62595455109753,9.92377791247329,4.61681508236144,11.6254387221052,7.65974146587579,7.40108532819446,6.23735419031233,8.16146342563582,44.1312218785013,2.9048049735635,15.6854019652049,4.8150577116125,1.50694765603753,2.05041341581538,2.97411625168479,3.73952545986482,2.93898049879682,2.3493995546752,11.4560474161814,18.1893196309153,12.6058069618646,11.0165447638237,10.8725913927524,6.98760203987768,9.30563990055263,8.92657321833628,8.11443420150492,4.14767914533737,4.34937519160848,12.4012446510522,21.5303826303329,25.480607530393,32.473348453456,26.7360834598903,24.1607259451813,21.3590174335272,31.379256747392,20.5524315074393,13.5287107662563,9.50499020650956,6.63623353319174,14.5962155008918,9.96296284498824,9.61414090035683,5.19177417435696,7.3512101269068,4.44723163223885,6.4983391956814,5.95702054694071,6.70619898563999,6.04957110821043,5.84747284438514,6.92725259810372,7.48012173962041,4.30787728868902,9.32341004171072,7.89481938163386,7.21903850365537,8.50034213741638,5.81815673898664,10.2564909589668,6.00231461421384,6.01886524842436,63.8169582157285,65.3661835840191,67.0287750724094,52.5870737971684,60.2872617398165,61.1869056885657,68.1772725234124,58.9920776223729,73.4090702554411,71.4509230217512,13.5961425335271,23.1434426572598,17.9270286041841,12.8846560046196,22.4286084011941,13.420576116851,12.0013233012872,13.3922787205281,14.7622836412235,11.3713745293709,10.1391719956096,13.3924702384114,13.3907355681932,11.9727034997106,12.6932386391905,12.3836359733599,16.3396899582246,11.767462448286,9.89006161927936,9.71512872887022,9.94320831917705,12.4233064311536,10.9680647375768,10.61028841416,12.1401100735776,13.1152642232099,10.426894453748,11.8381370147029,10.7285249938231,11.7839877048125,12.5753119211625,12.0175468498187,11.4584692087513,12.5498841360632,11.9602098808308,33.4746174436848,13.1001700729429,10.5286816483666,10.7121465958552,7.50010825006353,9.97031693167812
|short_description=p1@Trim32
}}
}}

Latest revision as of 04:51, 27 September 2015

Short description:p1@Trim32
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Trim32_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000050850, ENSMUST00000107366, NM_001161782, NM_053084, uc008thq.2, uc008thr.2_5end
EntrezGene:Trim32
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Trim32

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.03
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I37.86
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E710.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F212.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E611.13
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F19.33
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.11
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.86
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.88
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.22
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.11
GP2+ M cell, pool1.CNhs13228.11845-124H97.47
GP2+ M cell, pool2.CNhs13231.11846-124I14.74
GP2+ M cell, pool3.CNhs13240.11847-124I26.46
Ileum epithelium, pool1.CNhs13199.10252-104B96.65
Ileum epithelium, pool2.CNhs13232.10253-104C15.80
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.80
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.97
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.74
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D812.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.15
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B310.83
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B712.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.59
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.46
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E19.46
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C512.38
Mouse Granule cells, donor1.CNhs12131.11713-123C352.00
Mouse Granule cells, donor2.CNhs12357.11731-123E366.65
Mouse Granule cells, donor3.CNhs12108.11636-122C751.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C615.59
Mouse Meningeal cells, donor3.CNhs12109.11639-122D112.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E79.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D28.53
Mouse Microglia, donor1.CNhs12629.11718-123C811.38
Mouse Microglia, donor2.CNhs12634.11736-123E810.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D536.19
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F531.73
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D931.55
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F158.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D544.62
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D233.56
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F235.85
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D639.53
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D363.87
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F363.84
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D764.67
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D456.84
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F460.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D846.36
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E467.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E563.03
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I662.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D645.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F643.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E152.56
Mouse Schwann, donor1.CNhs12507.11728-123D99.92
Mouse Schwann, donor2.CNhs12573.11746-123F911.41
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G313.04
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C86.48
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.54
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.51
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.63
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.57
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.91
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D712.02
adrenal gland, embryo E14.CNhs11038.406-44C514.75
adrenal gland, embryo E16.CNhs11004.1254-43D612.79
adrenal gland, embryo E17.CNhs11043.1263-45I110.84
adrenal gland, embryo E18.CNhs11026.1262-18F513.57
adrenal gland, neonate N00.CNhs11191.1311-23C112.70
adrenal gland, neonate N25.CNhs11223.1377-27I315.83
amnion, adult pregnant day17.5.CNhs10488.583-22A88.16
aorta, adult.CNhs10498.46-23H19.11
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F56.96
bone (os femoris), neonate N16.CNhs11225.1525-43A64.42
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B253.58
cerebellum, neonate N30.CNhs11135.1395-42I244.40
colon, adult.CNhs10468.36-18H76.39
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.05
corpora quadrigemina, adult.CNhs10501.16-22A459.02
corpus striatum, adult.CNhs10487.19-21D852.61
corpus striatum, neonate N00.CNhs11226.630-43F174.14
cortex, adult.CNhs10473.12-14D568.66
cortex, neonate N30.CNhs11107.1392-42F279.27
diencephalon, adult.CNhs10482.20-12F254.23
diencephalon, neonate N30.CNhs11201.1388-42B251.59
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B115.79
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.98
epididymis, adult.CNhs10490.58-23B25.81
eyeball, adult.CNhs10484.31-12G420.20
eyeball, embryo E12.CNhs11016.345-16C616.13
eyeball, embryo E14.CNhs10521.399-16E220.69
eyeball, embryo E15.CNhs10593.426-16C916.57
eyeball, embryo E17.CNhs11023.1261-18D416.73
eyeball, neonate N00.CNhs11207.633-15C613.81
eyeball, neonate N01.CNhs11140.1532-43E717.68
eyeball, neonate N02.CNhs11205.1551-44G816.68
eyeball, neonate N16.CNhs11188.777-19A215.52
forelimb, embryo E11.CNhs10596.335-25E218.32
forelimb, embryo E12.CNhs10600.359-14H216.26
forelimb, embryo E13.CNhs10589.384-1E215.48
forelimb, embryo E14.CNhs10577.413-26A815.56
forelimb, embryo E15.CNhs11007.437-20E711.96
forelimb, embryo E17.CNhs10598.1517-43C412.19
forelimb, embryo E18.CNhs11008.1520-43B58.44
gonad, embryo E13.CNhs11044.1564-45I617.91
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E912.22
heart, embryo E12.CNhs11015.353-12F512.20
heart, embryo E13.CNhs11013.376-3I99.36
heart, embryo E14.CNhs10597.403-26D412.07
heart, embryo E15.CNhs11017.431-16C811.02
heart, embryo E16.CNhs11021.457-17C69.10
heart, embryo E17.CNhs11025.479-18E514.18
heart, embryo E18.CNhs11030.1283-20G39.39
heart, neonate N00.CNhs11213.639-21E39.46
heart, neonate N03.CNhs11221.1349-25I210.86
heart, neonate N10.CNhs11118.749-24G18.21
heart, neonate N16.CNhs11209.782-15G17.22
heart, neonate N20.CNhs11127.821-26I66.73
heart, neonate N25.CNhs11196.1351-25D37.25
heart, neonate N30.CNhs11202.1390-42D26.84
hippocampus, adult.CNhs10478.13-16E854.47
hippocampus, neonate N00.CNhs11228.627-43G148.26
intestinal mucosa, adult.CNhs10506.860-29I34.96
intestine, adult.CNhs10496.178-9A36.61
intestine, embryo E12.CNhs11019.1251-16I514.72
intestine, embryo E13.CNhs11010.381-16D513.47
intestine, embryo E15.CNhs10602.976-16D812.63
intestine, embryo E16.CNhs10585.463-22H410.08
intestine, embryo E17.CNhs10582.482-18D38.67
intestine, embryo E18.CNhs10526.1289-20F712.75
intestine, neonate N00.CNhs11126.644-26D111.39
intestine, neonate N01.CNhs11192.1322-23E97.74
intestine, neonate N06.CNhs11102.688-20B89.80
intestine, neonate N07.CNhs11095.720-20F29.95
intestine, neonate N10.CNhs11098.755-23A510.14
intestine, neonate N20.CNhs11187.827-18D113.48
intestine, neonate N25.CNhs11121.1352-25E38.00
intestine, neonate N30.CNhs11131.1384-42G19.36
kidney, embryo E14.CNhs10606.411-4I916.69
kidney, embryo E15.CNhs10997.434-16F813.94
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I213.24
kidney, embryo E18.CNhs11001.1288-20C712.03
kidney, neonate N00.CNhs11214.646-21G711.15
kidney, neonate N10.CNhs11206.758-6D510.50
kidney, neonate N20.CNhs11113.832-19I111.07
kidney, neonate N25.CNhs11122.1353-25F38.63
kidney, neonate N30.CNhs11203.1385-42H17.53
liver, adult pregnant day01.CNhs10466.508-5B27.11
liver, embryo E12.CNhs10601.355-15F83.67
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F53.62
liver, embryo E17.CNhs10510.481-18A35.35
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F42.59
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H25.58
liver, neonate N10.CNhs11115.751-24B98.74
liver, neonate N20.CNhs11220.823-25A38.34
liver, neonate N25.CNhs11198.1368-26H16.28
liver, neonate N30.CNhs11106.1382-42D17.24
lung, adult.CNhs10474.28-22B16.10
lung, embryo E12.CNhs10522.354-16G216.68
lung, embryo E14.CNhs10604.404-26F812.87
lung, embryo E15.CNhs11020.432-17C511.54
lung, embryo E16.CNhs10998.458-17B611.03
lung, embryo E17.CNhs10605.480-44A67.87
lung, embryo E18.CNhs10583.1287-20I610.95
lung, neonate N00.CNhs11224.640-42C69.17
lung, neonate N06.CNhs11212.683-20E59.14
lung, neonate N07.CNhs11111.715-19A38.86
lung, neonate N10.CNhs11219.750-23E613.87
lung, neonate N20.CNhs11109.822-18A47.70
lung, neonate N25.CNhs11119.1359-25C78.98
lung, neonate N30.CNhs11133.1394-42H29.11
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H29.11
medulla oblongata, adult.CNhs10477.17-12C247.36
medulla oblongata, neonate N30.CNhs11200.1396-42A343.37
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C722.95
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.31
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E115.46
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.27
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E317.88
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.73
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D820.94
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D918.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.36
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.07
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D614.23
olfactory brain, adult.CNhs10489.18-22I932.77
ovary, adult.CNhs10507.91-2I713.48
ovary, embryo E18.CNhs11040.505-44H716.92
ovary, neonate N00.CNhs11217.1299-22I416.13
oviduct, adult pregnant day01.CNhs10500.988-6G612.87
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F413.11
pancreas, embryo E15.CNhs11042.1556-45F210.88
pancreas, embryo E16.CNhs11003.460-26E57.54
pancreas, embryo E17.CNhs10599.1558-45G38.27
pancreas, embryo E18.CNhs10580.1535-43I76.76
pancreas, neonate N00.CNhs11105.645-26G97.24
pancreas, neonate N01.CNhs11138.1531-43D78.00
pancreas, neonate N02.CNhs11139.1539-43D87.84
pancreas, neonate N16.CNhs11136.787-43B65.37
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G88.51
pituitary gland, embryo E12.CNhs11018.346-16E615.31
pituitary gland, embryo E13.CNhs11009.370-44C717.98
pituitary gland, embryo E14.CNhs11037.398-44A517.58
pituitary gland, embryo E15.CNhs10592.427-16B913.48
pituitary gland, embryo E16.CNhs11036.449-43F612.66
pituitary gland, embryo E17.CNhs11039.1265-44F516.78
pituitary gland, neonate N00.CNhs11190.1308-22E915.53
placenta, adult pregnant day10.CNhs10472.539-13I74.22
placenta, adult pregnant day17.CNhs10464.577-18G37.63
prostate, adult.CNhs10470.859-1F89.92
skin, adult.CNhs10492.30-1C34.62
skin, neonate N00.CNhs11124.650-25G411.63
skin, neonate N03.CNhs11215.662-22H37.66
skin, neonate N06.CNhs11097.693-20I57.40
skin, neonate N10.CNhs11108.762-6C46.24
small intestine, neonate N16.CNhs11114.790-21I18.16
spinal cord, adult.CNhs10505.24-13C944.13
spleen, adult.CNhs10465.25-2G22.90
spleen, embryo E16.CNhs11035.461-43C115.69
spleen, embryo E18.CNhs11011.1271-21F24.82
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H12.05
spleen, neonate N25.CNhs11099.1354-25G32.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.35
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E318.19
stomach, embryo E15.CNhs10603.1252-16G812.61
stomach, embryo E16.CNhs11022.459-17D411.02
stomach, embryo E17.CNhs11006.1035-18D510.87
stomach, embryo E18.CNhs10999.1286-20C66.99
stomach, neonate N03.CNhs11193.1340-24B89.31
stomach, neonate N07.CNhs11210.718-18A98.93
stomach, neonate N25.CNhs11104.1355-25E48.11
stomach, neonate N30.CNhs11134.1386-42I14.15
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G512.40
testis, embryo E13.CNhs11031.389-23F521.53
testis, embryo E15.CNhs11034.443-27C525.48
testis, embryo E16.CNhs11033.470-26G532.47
testis, embryo E17.CNhs11029.486-18I526.74
testis, embryo E18.CNhs11027.503-18G524.16
testis, neonate N00.CNhs11189.1300-22B721.36
testis, neonate N07.CNhs11222.726-26I431.38
testis, neonate N10.CNhs11204.763-44D920.55
testis, neonate N20.CNhs11110.839-18H313.53
testis, neonate N30.CNhs11130.1391-42E29.50
thymus, adult.CNhs10471.38-12B56.64
thymus, embryo E14.CNhs11041.402-44I414.60
thymus, embryo E15.CNhs11005.430-45I29.96
thymus, embryo E16.CNhs11002.456-26C59.61
thymus, embryo E17.CNhs10581.478-18C15.19
thymus, embryo E18.CNhs10595.1273-19G47.35
thymus, neonate N02.CNhs11181.1541-43F84.45
thymus, neonate N03.CNhs11137.2104-43C76.50
thymus, neonate N06.CNhs11197.681-26C45.96
thymus, neonate N07.CNhs11211.713-19D36.71
thymus, neonate N10.CNhs11194.748-24E46.05
thymus, neonate N20.CNhs11186.820-7A25.85
thymus, neonate N25.CNhs11125.1362-25G76.93
thymus, neonate N30.CNhs11132.1393-42G27.48
tongue, adult.CNhs10499.32-1B44.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H39.32
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.89
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.22
urinary bladder, adult.CNhs10481.879-12E48.50
uterus, adult pregnant day19.CNhs10497.590-15F55.82
uterus, adult.CNhs10509.92-27E510.26
vagina, adult.CNhs10502.89-27D56.00
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A163.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A265.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A367.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D752.59
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A460.29
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A561.19
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A668.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A758.99
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A873.41
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A971.45
whole body, embryo E11.CNhs11014.324-5I813.60
whole body, embryo E12.CNhs10587.857-27C923.14
whole body, embryo E13.CNhs10512.372-23H217.93
whole body, embryo E14.5.CNhs10578.420-27D212.88
whole body, embryo E14.CNhs10519.395-14B122.43
whole body, embryo E16.CNhs10514.453-14F213.42
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.39
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.76
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.37
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.14
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.39
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G513.39
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.97
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G516.34
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.72
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.94
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.14
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.43
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.73
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.58
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.02
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.55
whole body, embryo E17.5.CNhs10513.490-9F911.96
whole body, embryo E17.CNhs10517.475-3I533.47
whole body, embryo E18.CNhs10516.493-3B313.10
whole body, neonate N00.CNhs10525.657-19C210.53
whole body, neonate N01.CNhs10576.659-23C610.71
whole body, neonate N06.CNhs10515.692-21D17.50
whole body, neonate N10.CNhs10518.761-6B49.97





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.45e-1533
neuronal stem cell1.45e-1533
neuroblast1.45e-1533
electrically signaling cell1.45e-1533
electrically responsive cell6.38e-1439
electrically active cell6.38e-1439
CNS neuron (sensu Vertebrata)1.28e-1323
neuroblast (sensu Vertebrata)1.28e-1323
ectodermal cell7.62e-1344
neurectodermal cell7.62e-1344
neural cell1.20e-1243

Uber anatomy
Ontology termp-valuen
central nervous system2.51e-2973
nervous system7.25e-2975
neurectoderm1.94e-2764
neural plate1.94e-2764
presumptive neural plate1.94e-2764
ectoderm-derived structure7.14e-2695
ectoderm7.14e-2695
presumptive ectoderm7.14e-2695
regional part of nervous system2.48e-2554
neural tube9.46e-2452
neural rod9.46e-2452
future spinal cord9.46e-2452
neural keel9.46e-2452
ecto-epithelium3.68e-2373
structure with developmental contribution from neural crest2.34e-2292
pre-chordal neural plate2.47e-2149
brain8.02e-2147
future brain8.02e-2147
regional part of brain2.46e-2046
gray matter6.11e-1934
anterior neural tube1.20e-1840
regional part of forebrain5.08e-1839
forebrain5.08e-1839
future forebrain5.08e-1839
brain grey matter3.15e-1629
regional part of telencephalon3.15e-1629
telencephalon3.15e-1629
cerebral cortex2.52e-1121
cerebral hemisphere2.52e-1121
pallium2.52e-1121
embryo1.60e-09320
regional part of cerebral cortex2.23e-0917
occipital lobe1.07e-0710
visual cortex1.07e-0710
neocortex1.07e-0710
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