FFCP PHASE1:Mm9::chr5:152171015..152171049,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:152171015..152171049,-
|short_description=p@chr5:152171015..152171049,-
|description=CAGE_peak_at_chr5:152171015..152171049,-
|association_with_transcript=...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1918 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:152171015..152171049,- | |||
|description=CAGE_peak_at_chr5:152171015..152171049,- | |||
|id=chr5:152171015..152171049,- | |||
|ontology_enrichment_celltype=CL:0000723!6.38e-10!91;CL:0000048!6.38e-10!91;CL:0000034!1.61e-09!97;CL:0000542!6.96e-09!13;CL:0000051!6.96e-09!13;CL:0000838!1.44e-08!12;CL:0000084!5.77e-08!11;CL:0000827!5.77e-08!11;CL:0000988!9.15e-08!32;CL:0002032!9.15e-08!32;CL:0000037!9.15e-08!32;CL:0000566!9.15e-08!32;CL:0000837!9.15e-08!32;CL:0000791!3.42e-07!9;CL:0000789!3.42e-07!9;CL:0002420!3.42e-07!9;CL:0002419!3.42e-07!9;CL:0000790!3.42e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,1.24e-11,91;CL:0000048,1.24e-11,91;CL:0000034,2.41e-11,97;CL:0000542,2.99e-09,13;CL:0000051,2.99e-09,13;CL:0000838,6.41e-09,12;CL:0000988,1.71e-08,32;CL:0002032,1.71e-08,32;CL:0000037,1.71e-08,32;CL:0000837,1.71e-08,32;CL:0000084,2.75e-08,11;CL:0000827,2.75e-08,11;CL:0000791,1.78e-07,9;CL:0000789,1.78e-07,9;CL:0002420,1.78e-07,9;CL:0002419,1.78e-07,9;CL:0000790,1.78e-07,9;CL:0000738,2.88e-07,17;CL:0002087,2.88e-07,17;CL:0000624,7.68e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.52e-10!73;UBERON:0005743!5.52e-10!73;UBERON:0000073!5.36e-09!75;UBERON:0001016!5.36e-09!75;UBERON:0002346!7.63e-08!71;UBERON:0003075!7.63e-08!71;UBERON:0007284!7.63e-08!71;UBERON:0004121!2.19e-07!102;UBERON:0000924!2.19e-07!102;UBERON:0006601!2.19e-07!102;UBERON:0003056!2.36e-07!49;UBERON:0000153!3.60e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.58e-10,73;UBERON:0001016,3.94e-09,75;UBERON:0002346,2.44e-08,64;UBERON:0003075,2.44e-08,64;UBERON:0007284,2.44e-08,64;UBERON:0004121,1.73e-07,95;UBERON:0000924,1.73e-07,95;UBERON:0006601,1.73e-07,95;UBERON:0003056,2.70e-07,49;UBERON:0000073,5.68e-07,54 | |||
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| ||
|short_description=p@chr5:152171015..152171049,- | |||
}} | }} |
Latest revision as of 03:32, 4 August 2015
Short description: | p@chr5:152171015..152171049, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:152171015..152171049, - |
Coexpression cluster: | MCL_coexpression_mm9:1918 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 1.24e-11 | 91 |
multi fate stem cell | 1.24e-11 | 91 |
stem cell | 2.41e-11 | 97 |
lymphocyte | 2.99e-09 | 13 |
common lymphoid progenitor | 2.99e-09 | 13 |
lymphoid lineage restricted progenitor cell | 6.41e-09 | 12 |
hematopoietic cell | 1.71e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.71e-08 | 32 |
hematopoietic stem cell | 1.71e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.71e-08 | 32 |
T cell | 2.75e-08 | 11 |
pro-T cell | 2.75e-08 | 11 |
mature alpha-beta T cell | 1.78e-07 | 9 |
alpha-beta T cell | 1.78e-07 | 9 |
immature T cell | 1.78e-07 | 9 |
mature T cell | 1.78e-07 | 9 |
immature alpha-beta T cell | 1.78e-07 | 9 |
leukocyte | 2.88e-07 | 17 |
nongranular leukocyte | 2.88e-07 | 17 |
CD4-positive, alpha-beta T cell | 7.68e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.58e-10 | 73 |
nervous system | 3.94e-09 | 75 |
neurectoderm | 2.44e-08 | 64 |
neural plate | 2.44e-08 | 64 |
presumptive neural plate | 2.44e-08 | 64 |
ectoderm-derived structure | 1.73e-07 | 95 |
ectoderm | 1.73e-07 | 95 |
presumptive ectoderm | 1.73e-07 | 95 |
pre-chordal neural plate | 2.70e-07 | 49 |
regional part of nervous system | 5.68e-07 | 54 |