FFCP PHASE2:Mm9::chr10:68996509..68996524,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:11735 |HGNC= |MCL_coexpression_id=13 |TSSclassifier=NA |UniProt=uniprot:G3X971,uniprot:Q3UVY0,uniprot:Q8VC68,unipro...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=11735 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |MCL_coexpression_id=13 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=G3X971,Q3UVY0,Q8VC68,Q9QXH1 | ||
|association_with_transcript=53bp_to_NM_146005,NM_170688,NM_170689,NM_170690,NM_170728,NM_170729,NM_170730,uc007fmt.1,uc007fmu.1,uc007fmv.1,uc007fmw.1,uc007fmx.1,uc007fmy.1,uc007fmz.1,uc007fna.1,uc007fnb.1,uc007fnc.1_5end | |association_with_transcript=53bp_to_NM_146005,NM_170688,NM_170689,NM_170690,NM_170728,NM_170729,NM_170730,uc007fmt.1,uc007fmu.1,uc007fmv.1,uc007fmw.1,uc007fmx.1,uc007fmy.1,uc007fmz.1,uc007fna.1,uc007fnb.1,uc007fnc.1_5end | ||
|cluster_id=chr10:68996509..68996524,+ | |cluster_id=chr10:68996509..68996524,+ | ||
Latest revision as of 05:59, 26 September 2015
| Short description: | p10@Ank3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_10_at_Ank3_5end |
| Coexpression cluster: | MCL_coexpression_mm9:13 |
| Association with transcript: | 53bp_to_NM_146005, NM_170688, NM_170689, NM_170690, NM_170728, NM_170729, NM_170730, uc007fmt.1, uc007fmu.1, uc007fmv.1, uc007fmw.1, uc007fmx.1, uc007fmy.1, uc007fmz.1, uc007fna.1, uc007fnb.1, uc007fnc.1_5end |
| EntrezGene: | Ank3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 1.85e-14 | 23 |
| neuroblast (sensu Vertebrata) | 1.85e-14 | 23 |
| neuron | 5.28e-09 | 33 |
| neuronal stem cell | 5.28e-09 | 33 |
| neuroblast | 5.28e-09 | 33 |
| electrically signaling cell | 5.28e-09 | 33 |
| electrically responsive cell | 1.44e-08 | 39 |
| electrically active cell | 1.44e-08 | 39 |
| Ontology term | p-value | n |
|---|---|---|
| gray matter | 2.55e-19 | 34 |
| neurectoderm | 7.32e-19 | 64 |
| neural plate | 7.32e-19 | 64 |
| presumptive neural plate | 7.32e-19 | 64 |
| regional part of nervous system | 9.78e-19 | 54 |
| neural tube | 8.34e-18 | 52 |
| neural rod | 8.34e-18 | 52 |
| future spinal cord | 8.34e-18 | 52 |
| neural keel | 8.34e-18 | 52 |
| pre-chordal neural plate | 5.74e-17 | 49 |
| nervous system | 2.61e-16 | 75 |
| ectoderm-derived structure | 3.38e-16 | 95 |
| ectoderm | 3.38e-16 | 95 |
| presumptive ectoderm | 3.38e-16 | 95 |
| ecto-epithelium | 3.97e-16 | 73 |
| brain grey matter | 8.20e-16 | 29 |
| regional part of telencephalon | 8.20e-16 | 29 |
| telencephalon | 8.20e-16 | 29 |
| structure with developmental contribution from neural crest | 1.45e-15 | 92 |
| central nervous system | 1.69e-15 | 73 |
| anterior neural tube | 3.21e-15 | 40 |
| regional part of forebrain | 8.43e-15 | 39 |
| forebrain | 8.43e-15 | 39 |
| future forebrain | 8.43e-15 | 39 |
| brain | 9.21e-15 | 47 |
| future brain | 9.21e-15 | 47 |
| regional part of brain | 4.15e-14 | 46 |
| cerebral cortex | 4.63e-11 | 21 |
| cerebral hemisphere | 4.63e-11 | 21 |
| pallium | 4.63e-11 | 21 |
| regional part of cerebral cortex | 7.81e-09 | 17 |
| occipital lobe | 4.00e-08 | 10 |
| visual cortex | 4.00e-08 | 10 |
| neocortex | 4.00e-08 | 10 |
