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FFCP PHASE1:Mm9::chr5:65884139..65884160,-: Difference between revisions

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(Created page with "{{FFCP |id=chr5:65884139..65884160,- |short_description=p4@1110003E01Rik |description=CAGE_peak_4_at_1110003E01Rik_5end |association_with_transcript=-19bp_to_ENSMUST000001...")
 
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{{FFCP
{{FFCP
|id=chr5:65884139..65884160,-
|DHSsupport=NA
|short_description=p4@1110003E01Rik
|DPIdataset=NA
|description=CAGE_peak_4_at_1110003E01Rik_5end
|association_with_transcript=-19bp_to_ENSMUST00000144562_5end
|EntrezGene=68552
|EntrezGene=68552
|HGNC=
|HGNC=
|MCL_coexpression_id=3
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-19bp_to_ENSMUST00000144562_5end
|cluster_id=chr5:65884139..65884160,-
|description=CAGE_peak_4_at_1110003E01Rik_5end
|id=chr5:65884139..65884160,-
|ontology_enrichment_celltype=CL:0000117!4.35e-11!23;CL:0000337!4.35e-11!23;CL:0000221!1.80e-08!44;CL:0000133!1.80e-08!44;CL:0002319!2.01e-08!43;CL:0000055!8.01e-08!50;CL:0000540!2.40e-07!33;CL:0000047!2.40e-07!33;CL:0000031!2.40e-07!33;CL:0000404!2.40e-07!33;CL:0000723!5.17e-07!91;CL:0000048!5.17e-07!91
|ontology_enrichment_celltype_v019_2=CL:0000117,4.35e-11,23;CL:0000337,4.35e-11,23;CL:0000221,1.80e-08,44;CL:0000133,1.80e-08,44;CL:0002319,2.01e-08,43;CL:0000540,2.40e-07,33;CL:0000047,2.40e-07,33;CL:0000031,2.40e-07,33;CL:0000404,2.40e-07,33;CL:0000723,5.05e-07,91;CL:0000048,5.05e-07,91
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.89e-17,54;UBERON:0001017,5.79e-17,73;UBERON:0002020,1.25e-16,34;UBERON:0001049,1.40e-16,52;UBERON:0005068,1.40e-16,52;UBERON:0006241,1.40e-16,52;UBERON:0007135,1.40e-16,52;UBERON:0001016,2.10e-15,75;UBERON:0003528,1.20e-14,29;UBERON:0002791,1.20e-14,29;UBERON:0001893,1.20e-14,29;UBERON:0000955,1.49e-14,47;UBERON:0006238,1.49e-14,47;UBERON:0002616,4.88e-14,46;UBERON:0002346,3.94e-13,64;UBERON:0003075,3.94e-13,64;UBERON:0007284,3.94e-13,64;UBERON:0003080,5.30e-13,40;UBERON:0002780,7.78e-13,39;UBERON:0001890,7.78e-13,39;UBERON:0006240,7.78e-13,39;UBERON:0004121,7.10e-12,95;UBERON:0000924,7.10e-12,95;UBERON:0006601,7.10e-12,95;UBERON:0000956,6.71e-11,21;UBERON:0001869,6.71e-11,21;UBERON:0000203,6.71e-11,21;UBERON:0010371,1.21e-10,73;UBERON:0003056,4.32e-10,49;UBERON:0002619,4.65e-09,17;UBERON:0010314,2.81e-07,92
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|phase1_expression=3.68342348341026,3.83872948403297,5.91499011206397,4.23449895829562,2.50447864973174,3.52546471014969,2.10251376535973,6.45616617207881,2.81577444303333,3.27690336850791,1.88339765048055,0.8774937489487,3.59521532855532,4.89554253546385,1.66554880907831,2.63217847606774,0,13.0916798623669,10.6949258212476,11.8829102503448,3.82694805679814,2.78014663362479,4.70159620450084,3.19984845586813,4.35877634027623,4.59385571292016,3.01533397311352,3.44753972297422,3.42042155021473,4.28451220591882,5.32153225572731,1.90509202037889,0,0,3.75507105676657,3.98963148860382,3.47087905646027,26.7860243671621,23.440060335714,28.2702821745851,32.9409633297368,23.9065919735456,34.4712350652119,2.89562681343828,3.24406179902447,4.40512205188036,12.5182615095686,6.97680500417429,9.88587822305123,12.4435135407541,6.99932108126813,2.87505128729943,14.9326519391385,3.62681071005672,3.36093799142464,3.8588915405392,4.58453503902011,2.57836046138721,6.67644320836673,8.46385566835253,5.70448263155561,6.77689064138264,3.55717918444456,8.99899717281399,7.9109309005358,6.3943210345149,7.19040265244171,4.2264013585371,7.05089363697648,7.56033254657468,8.2026734927039,6.56997264128748,6.40518768759679,8.81933754347669,9.4887016308054,16.5459381589804,6.60695285996332,5.61824287574826,5.37622866396852,8.44072241473241,10.9785172322892,6.77187381723788,6.42120897703176,5.6276261003168,6.26472815884921,5.59794312399969,6.40672563595963,7.08317894136142,1.74170244666323,1.51143120213571,2.31891590961342,4.30211938490693,4.0798280022465,4.31762553310254,5.19821133958135,2.24013443548668,3.08977724289854,2.38602451609281,2.85764605063156,4.94675404314476,4.22530259330042,1.28326477414318,0,0,6.27824018932521,5.57391704045217,5.56076889516262,2.96878087269556,3.6251303710604,3.85949561568544,1.38788261412909,1.21786191324856,1.15307748628029,3.76806601381556,3.29248379979973,3.26733137457156,3.95511948374998,3.32578520915797,4.42305275974937,4.36770494858005,5.07935492458905,6.30337829075789,11.1835056730873,2.92780797011547,3.97948742945565,1.27728527604296,4.19352935770721,6.59893004092748,5.20987930999565,4.79330046095433,7.77751024791665,10.3036568732549,6.25767552692195,4.34716277461562,5.194701113989,6.00292673350703,2.54598409625791,6.59356944233493,9.35074206204597,14.3100462002802,1.43132487258974,2.5289231487682,3.42118046630164,2.56198190320716,2.85753296435577,2.0498195245576,2.90475346135159,5.69147415625834,1.72454394346274,2.26927296201383,3.51902248327898,4.16471891612392,3.33656699070717,3.48252166522167,4.11564272815887,3.38358253591438,4.91549231119264,4.11756651383544,2.84163499395593,3.10688658803253,2.81431271977315,2.16074473753218,2.60419209143731,1.57411385397923,2.31400669331067,3.48800917125612,2.95100741539581,2.80236821681207,2.79751744852917,2.95501435342371,2.59420190546738,4.38599962275997,3.73235195994786,3.08674763148855,6.30869845692382,6.5858951922742,4.29544417878937,4.23120906661671,2.13288250535234,2.09013004674395,1.41754207454303,0.80673409849337,2.2237804384487,2.66315876557583,3.32170343081158,4.77626968699632,2.5133520880027,3.38226002469956,3.31438948102504,3.59527763461689,4.32276099749388,4.58024928485045,2.0863469104839,1.71372768914593,4.50830942692322,2.8511185898344,3.68509725618489,2.66516115583211,3.09859031908861,3.39503340353085,2.82597710114475,3.08492909804501,2.96452627087149,1.50160595144485,0.786235980452812,0.224862112384854,1.42002084971952,1.68824011826692,1.52775511068852,0.575392274901621,1.62135226775035,2.19649130550465,0,2.97712758134803,2.49630138491648,3.53610429125956,3.58794827043824,3.37710464954357,4.24932337383191,1.70542270593436,1.46668478797823,1.69745085775188,1.64283173801951,3.68513766371995,3.33261097240419,2.53673742215138,2.04925687338048,2.43611158613652,3.18909537314974,3.11340297959902,3.28101465545202,3.32692834737477,6.03165135757089,3.26343410291226,5.90117127622843,4.13905119457099,5.29816946959713,5.04010252346474,2.78689407140348,2.01976741763498,5.04813151066011,3.12350995437311,2.80050417052639,2.38968797952552,4.01037613348309,3.11384183867716,1.61924280669958,2.63030272120181,3.95287777946523,7.71171159412337,5.96148357874728,5.69809931735217,4.0721739838394,5.1140738121486,1.32745138339963,1.21390318077491,2.72091201268276,4.52652191414155,2.36241514304618,3.3817866273832,2.32585463851399,1.45413491791002,1.78248689192361,4.42451461110142,4.21674434299995,6.18813259489121,4.08527526904546,2.52085531643834,3.88076051348264,3.00071849044229,2.30542303734956,3.38900753443934,5.26556865926787,5.48036908406279,1.64270195644597,1.69465656691056,6.61585194164886,1.15420377059036,1.45317984026315,2.47282992205439,2.26807453605959,2.62625439592098,2.62332752966866,6.86073617438886,3.2465467351592,2.47664241555867,2.40752885580625,2.26042148405629,1.91371918809435,5.0331198105435,6.4591803397665,4.61839792668071,4.69879910935041,4.77335309007557,1.58167996790568,1.62655573701479,2.37611749807963,3.55450103224597,1.74690050996942,2.83215127408124,2.72756403893609,1.83229159388821,2.59229946583586,9.32008969630389,4.50954350947352,2.69129782879162,5.12921320417003,5.83353565032143,5.03723311563151,2.87225413334323,3.63807439801837,4.29674469985035,3.35549902162275,2.89900944991207,3.16833006883652,6.00421129193539,3.24360344464263,2.67048488628551,3.11809975146708,3.40150721768215,4.76835251475036,3.36547258655913,4.57837534241189,4.4425237977185,3.88654713940499,4.94048307170519,5.9449307251249,4.04089734889384,5.2594605981706,4.53460767230423,1.77588762699252,0.62799699626633,0.335769232728157,6.76163579112667,2.81523713176773,4.2124873581471,5.78794623513478,6.52043735245972,5.0827665835536,9.66682996665071,6.87474616127276,6.18671456437275,8.22099023724771,9.06472676867641,6.07520250208625,10.3573876741571,6.79713613476307,4.65984280576638,1.24544817101012,1.59609949360412,1.70733605754134,4.132814190161,2.93458427679175,1.65459157605013,1.77797382241292,2.67845574410562,2.56735367673452,1.01078884705519,1.77435509923168,2.45214243801899,3.83930180626518,2.04880487695582,3.56099907524802,3.33405583898152,2.54945517078682,2.70072908649187,2.47251540481984,2.35518272215036,3.42869252385415,2.12970967391205,2.14592570952589,2.61623549938191,2.35273451038327,3.21535509988371,2.92684756596436,1.8414879800649,2.58027816307137,2.80571135828869,2.49133538060766,3.74317033027141,2.86461730218783,2.01417893541756,2.89359916471712,4.74640098082097,3.74290573512653,2.36358159453128,4.78220830172108,3.30887128679273,4.63735671240843
|short_description=p4@1110003E01Rik
}}
}}

Latest revision as of 03:31, 26 September 2015

Short description:p4@1110003E01Rik
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_1110003E01Rik_5end
Coexpression cluster:MCL_coexpression_mm9:3
Association with transcript: -19bp_to_ENSMUST00000144562_5end
EntrezGene:1110003E01Rik
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@1110003E01Rik

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.23
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.82
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.88
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.60
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.90
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A213.09
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.88
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.83
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.70
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.36
GP2+ M cell, pool1.CNhs13228.11845-124H94.59
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I23.45
Ileum epithelium, pool1.CNhs13199.10252-104B93.42
Ileum epithelium, pool2.CNhs13232.10253-104C14.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G826.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H123.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H328.27
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G932.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H223.91
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H434.47
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.24
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.41
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B712.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.98
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.89
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C312.44
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A214.93
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.36
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.86
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C36.68
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.78
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C87.19
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.05
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.56
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.20
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.49
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.44
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.98
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.26
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.08
Mouse Schwann, donor1.CNhs12507.11728-123D91.74
Mouse Schwann, donor2.CNhs12573.11746-123F91.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.23
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.57
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.56
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.97
accessory axillary lymph node, adult.CNhs10475.1063-29H93.63
adrenal gland, adult.CNhs10508.49-24D73.86
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F53.77
adrenal gland, neonate N00.CNhs11191.1311-23C13.29
adrenal gland, neonate N25.CNhs11223.1377-27I33.27
amnion, adult pregnant day17.5.CNhs10488.583-22A83.96
aorta, adult.CNhs10498.46-23H13.33
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F54.37
bone (os femoris), neonate N16.CNhs11225.1525-43A65.08
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.19
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.21
corpora quadrigemina, adult.CNhs10501.16-22A44.79
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F110.30
cortex, adult.CNhs10473.12-14D56.26
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F25.19
diencephalon, neonate N30.CNhs11201.1388-42B26.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.55
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.59
epididymis, adult.CNhs10490.58-23B29.35
eyeball, adult.CNhs10484.31-12G414.31
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C62.86
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G82.90
eyeball, neonate N16.CNhs11188.777-19A25.69
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E23.52
forelimb, embryo E14.CNhs10577.413-26A84.16
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B54.12
gonad, embryo E13.CNhs11044.1564-45I63.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.12
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C62.31
heart, embryo E17.CNhs11025.479-18E53.49
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E32.80
heart, neonate N03.CNhs11221.1349-25I22.80
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G12.59
heart, neonate N20.CNhs11127.821-26I64.39
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D23.09
hippocampus, adult.CNhs10478.13-16E86.31
hippocampus, neonate N00.CNhs11228.627-43G16.59
intestinal mucosa, adult.CNhs10506.860-29I34.30
intestine, adult.CNhs10496.178-9A34.23
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F72.66
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E94.78
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F23.38
intestine, neonate N10.CNhs11098.755-23A53.31
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E34.32
intestine, neonate N30.CNhs11131.1384-42G14.58
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I22.85
kidney, embryo E18.CNhs11001.1288-20C73.69
kidney, neonate N00.CNhs11214.646-21G72.67
kidney, neonate N10.CNhs11206.758-6D53.10
kidney, neonate N20.CNhs11113.832-19I13.40
kidney, neonate N25.CNhs11122.1353-25F32.83
kidney, neonate N30.CNhs11203.1385-42H13.08
liver, adult pregnant day01.CNhs10466.508-5B22.96
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A33.54
liver, neonate N25.CNhs11198.1368-26H13.59
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B14.25
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A63.69
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C62.54
lung, neonate N06.CNhs11212.683-20E52.05
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E63.19
lung, neonate N20.CNhs11109.822-18A43.11
lung, neonate N25.CNhs11119.1359-25C73.28
lung, neonate N30.CNhs11133.1394-42H23.33
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C25.30
medulla oblongata, neonate N30.CNhs11200.1396-42A35.04
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.79
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I97.71
ovary, adult.CNhs10507.91-2I75.96
ovary, embryo E18.CNhs11040.505-44H75.70
ovary, neonate N00.CNhs11217.1299-22I44.07
oviduct, adult pregnant day01.CNhs10500.988-6G65.11
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E54.53
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C73.88
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F63.39
pituitary gland, embryo E17.CNhs11039.1265-44F55.27
pituitary gland, neonate N00.CNhs11190.1308-22E95.48
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F86.62
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H32.47
skin, neonate N06.CNhs11097.693-20I52.27
skin, neonate N10.CNhs11108.762-6C42.63
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C96.86
spleen, adult.CNhs10465.25-2G23.25
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G35.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.62
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.70
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D42.38
stomach, embryo E17.CNhs11006.1035-18D53.55
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B82.83
stomach, neonate N07.CNhs11210.718-18A92.73
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I12.59
submandibular gland, adult.CNhs10469.59-29C19.32
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F52.69
testis, embryo E15.CNhs11034.443-27C55.13
testis, embryo E16.CNhs11033.470-26G55.83
testis, embryo E17.CNhs11029.486-18I55.04
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B73.64
testis, neonate N07.CNhs11222.726-26I44.30
testis, neonate N10.CNhs11204.763-44D93.36
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B56.00
thymus, embryo E14.CNhs11041.402-44I43.24
thymus, embryo E15.CNhs11005.430-45I22.67
thymus, embryo E16.CNhs11002.456-26C53.12
thymus, embryo E17.CNhs10581.478-18C13.40
thymus, embryo E18.CNhs10595.1273-19G44.77
thymus, neonate N02.CNhs11181.1541-43F83.37
thymus, neonate N03.CNhs11137.2104-43C74.58
thymus, neonate N06.CNhs11197.681-26C44.44
thymus, neonate N07.CNhs11211.713-19D33.89
thymus, neonate N10.CNhs11194.748-24E44.94
thymus, neonate N20.CNhs11186.820-7A25.94
thymus, neonate N25.CNhs11125.1362-25G74.04
thymus, neonate N30.CNhs11132.1393-42G25.26
tongue, adult.CNhs10499.32-1B44.53
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E46.76
uterus, adult pregnant day19.CNhs10497.590-15F52.82
uterus, adult.CNhs10509.92-27E54.21
vagina, adult.CNhs10502.89-27D55.79
vesicular gland, adult.CNhs10491.51-27F86.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.19
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.22
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.74
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C64.78
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B44.64





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.35e-1123
neuroblast (sensu Vertebrata)4.35e-1123
ectodermal cell1.80e-0844
neurectodermal cell1.80e-0844
neural cell2.01e-0843
neuron2.40e-0733
neuronal stem cell2.40e-0733
neuroblast2.40e-0733
electrically signaling cell2.40e-0733
somatic stem cell5.05e-0791
multi fate stem cell5.05e-0791

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.89e-1754
central nervous system5.79e-1773
gray matter1.25e-1634
neural tube1.40e-1652
neural rod1.40e-1652
future spinal cord1.40e-1652
neural keel1.40e-1652
nervous system2.10e-1575
brain grey matter1.20e-1429
regional part of telencephalon1.20e-1429
telencephalon1.20e-1429
brain1.49e-1447
future brain1.49e-1447
regional part of brain4.88e-1446
neurectoderm3.94e-1364
neural plate3.94e-1364
presumptive neural plate3.94e-1364
anterior neural tube5.30e-1340
regional part of forebrain7.78e-1339
forebrain7.78e-1339
future forebrain7.78e-1339
ectoderm-derived structure7.10e-1295
ectoderm7.10e-1295
presumptive ectoderm7.10e-1295
cerebral cortex6.71e-1121
cerebral hemisphere6.71e-1121
pallium6.71e-1121
ecto-epithelium1.21e-1073
pre-chordal neural plate4.32e-1049
regional part of cerebral cortex4.65e-0917
structure with developmental contribution from neural crest2.81e-0792
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