FFCP PHASE1:Mm9::chr6:18464741..18464770,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:18464741..18464770,-
|short_description=p2@Cttnbp2
|description=CAGE_peak_2_at_Cttnbp2_5end
|association_with_transcript=0bp_to_ENSMUST00000148602_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=30785 | |EntrezGene=30785 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=D6RI37 | |UniProt=D6RI37 | ||
|association_with_transcript=0bp_to_ENSMUST00000148602_5end | |||
|cluster_id=chr6:18464741..18464770,- | |||
|description=CAGE_peak_2_at_Cttnbp2_5end | |||
|id=chr6:18464741..18464770,- | |||
|ontology_enrichment_celltype=CL:0000117!1.64e-11!23;CL:0000337!1.64e-11!23;CL:0000540!2.89e-11!33;CL:0000047!2.89e-11!33;CL:0000031!2.89e-11!33;CL:0000404!2.89e-11!33;CL:0000221!1.70e-07!44;CL:0000133!1.70e-07!44;CL:0000393!3.28e-07!39;CL:0000211!3.28e-07!39;CL:0002319!3.33e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.53e-12,23;CL:0000337,7.53e-12,23;CL:0000540,1.35e-11,33;CL:0000047,1.35e-11,33;CL:0000031,1.35e-11,33;CL:0000404,1.35e-11,33;CL:0000221,1.22e-07,44;CL:0000133,1.22e-07,44;CL:0000393,1.42e-07,39;CL:0000211,1.42e-07,39;CL:0002319,2.44e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!9.96e-26!102;UBERON:0000924!9.96e-26!102;UBERON:0006601!9.96e-26!102;UBERON:0001017!5.45e-22!73;UBERON:0005743!5.45e-22!73;UBERON:0002346!6.72e-22!71;UBERON:0003075!6.72e-22!71;UBERON:0007284!6.72e-22!71;UBERON:0000073!2.57e-21!75;UBERON:0001016!2.57e-21!75;UBERON:0000033!3.62e-21!63;UBERON:0001049!5.96e-20!52;UBERON:0005068!5.96e-20!52;UBERON:0006241!5.96e-20!52;UBERON:0007135!5.96e-20!52;UBERON:0000955!3.17e-19!50;UBERON:0006238!3.17e-19!50;UBERON:0002616!1.69e-18!49;UBERON:0002020!1.68e-17!34;UBERON:0003056!2.22e-17!49;UBERON:0003080!2.42e-16!40;UBERON:0002780!9.43e-16!39;UBERON:0001890!9.43e-16!39;UBERON:0006240!9.43e-16!39;UBERON:0002791!6.33e-15!29;UBERON:0003528!6.33e-15!29;UBERON:0001893!6.33e-15!29;UBERON:0000468!1.98e-11!333;UBERON:0000956!2.88e-11!21;UBERON:0001869!2.88e-11!21;UBERON:0000203!2.88e-11!21;UBERON:0002619!6.12e-09!17;UBERON:0000922!9.20e-09!328;UBERON:0000153!1.30e-08!94;UBERON:0002021!4.49e-08!10;UBERON:0000411!4.49e-08!10;UBERON:0001950!4.49e-08!10;UBERON:0007811!1.44e-07!86;UBERON:0000479!3.98e-07!349 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.08e-24,95;UBERON:0000924,2.08e-24,95;UBERON:0006601,2.08e-24,95;UBERON:0001017,1.34e-22,73;UBERON:0010371,2.34e-22,73;UBERON:0001016,6.61e-22,75;UBERON:0000073,9.27e-22,54;UBERON:0002346,2.62e-21,64;UBERON:0003075,2.62e-21,64;UBERON:0007284,2.62e-21,64;UBERON:0001049,1.83e-20,52;UBERON:0005068,1.83e-20,52;UBERON:0006241,1.83e-20,52;UBERON:0007135,1.83e-20,52;UBERON:0002020,4.81e-18,34;UBERON:0003056,6.44e-18,49;UBERON:0000955,7.02e-18,47;UBERON:0006238,7.02e-18,47;UBERON:0002616,3.80e-17,46;UBERON:0003080,7.62e-17,40;UBERON:0002780,3.11e-16,39;UBERON:0001890,3.11e-16,39;UBERON:0006240,3.11e-16,39;UBERON:0010314,5.06e-16,92;UBERON:0003528,2.23e-15,29;UBERON:0002791,2.23e-15,29;UBERON:0001893,2.23e-15,29;UBERON:0000956,1.35e-11,21;UBERON:0001869,1.35e-11,21;UBERON:0000203,1.35e-11,21;UBERON:0002619,3.43e-09,17;UBERON:0002021,2.69e-08,10;UBERON:0000411,2.69e-08,10;UBERON:0001950,2.69e-08,10 | |||
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| ||
|short_description=p2@Cttnbp2 | |||
}} | }} |
Latest revision as of 23:46, 26 September 2015
Short description: | p2@Cttnbp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cttnbp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000148602_5end |
EntrezGene: | Cttnbp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.53e-12 | 23 |
neuroblast (sensu Vertebrata) | 7.53e-12 | 23 |
neuron | 1.35e-11 | 33 |
neuronal stem cell | 1.35e-11 | 33 |
neuroblast | 1.35e-11 | 33 |
electrically signaling cell | 1.35e-11 | 33 |
ectodermal cell | 1.22e-07 | 44 |
neurectodermal cell | 1.22e-07 | 44 |
electrically responsive cell | 1.42e-07 | 39 |
electrically active cell | 1.42e-07 | 39 |
neural cell | 2.44e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.08e-24 | 95 |
ectoderm | 2.08e-24 | 95 |
presumptive ectoderm | 2.08e-24 | 95 |
central nervous system | 1.34e-22 | 73 |
ecto-epithelium | 2.34e-22 | 73 |
nervous system | 6.61e-22 | 75 |
regional part of nervous system | 9.27e-22 | 54 |
neurectoderm | 2.62e-21 | 64 |
neural plate | 2.62e-21 | 64 |
presumptive neural plate | 2.62e-21 | 64 |
neural tube | 1.83e-20 | 52 |
neural rod | 1.83e-20 | 52 |
future spinal cord | 1.83e-20 | 52 |
neural keel | 1.83e-20 | 52 |
gray matter | 4.81e-18 | 34 |
pre-chordal neural plate | 6.44e-18 | 49 |
brain | 7.02e-18 | 47 |
future brain | 7.02e-18 | 47 |
regional part of brain | 3.80e-17 | 46 |
anterior neural tube | 7.62e-17 | 40 |
regional part of forebrain | 3.11e-16 | 39 |
forebrain | 3.11e-16 | 39 |
future forebrain | 3.11e-16 | 39 |
structure with developmental contribution from neural crest | 5.06e-16 | 92 |
brain grey matter | 2.23e-15 | 29 |
regional part of telencephalon | 2.23e-15 | 29 |
telencephalon | 2.23e-15 | 29 |
cerebral cortex | 1.35e-11 | 21 |
cerebral hemisphere | 1.35e-11 | 21 |
pallium | 1.35e-11 | 21 |
regional part of cerebral cortex | 3.43e-09 | 17 |
occipital lobe | 2.69e-08 | 10 |
visual cortex | 2.69e-08 | 10 |
neocortex | 2.69e-08 | 10 |