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FFCP PHASE1:Mm9::chr6:88824978..88825024,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:88824978..88825024,-
|DHSsupport=NA
|short_description=p1@Podxl2
|DPIdataset=NA
|description=CAGE_peak_1_at_Podxl2_5end
|association_with_transcript=0bp_to_ENSMUST00000153852,uc009cvw.1_5end
|EntrezGene=319655
|EntrezGene=319655
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q8CAE9
|UniProt=Q8CAE9
|association_with_transcript=0bp_to_ENSMUST00000153852,uc009cvw.1_5end
|cluster_id=chr6:88824978..88825024,-
|description=CAGE_peak_1_at_Podxl2_5end
|id=chr6:88824978..88825024,-
|ontology_enrichment_celltype=CL:0000540!1.96e-19!33;CL:0000047!1.96e-19!33;CL:0000031!1.96e-19!33;CL:0000404!1.96e-19!33;CL:0000221!1.32e-18!44;CL:0000133!1.32e-18!44;CL:0002319!1.74e-18!43;CL:0000393!1.62e-17!39;CL:0000211!1.62e-17!39;CL:0000055!3.61e-16!50;CL:0000117!7.12e-16!23;CL:0000337!7.12e-16!23
|ontology_enrichment_celltype_v019_2=CL:0000540,1.05e-19,33;CL:0000047,1.05e-19,33;CL:0000031,1.05e-19,33;CL:0000404,1.05e-19,33;CL:0000221,7.23e-19,44;CL:0000133,7.23e-19,44;CL:0002319,9.61e-19,43;CL:0000393,9.23e-18,39;CL:0000211,9.23e-18,39;CL:0000117,4.31e-16,23;CL:0000337,4.31e-16,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!5.24e-35!73;UBERON:0005743!5.24e-35!73;UBERON:0000073!1.03e-33!75;UBERON:0001016!1.03e-33!75;UBERON:0004121!2.48e-33!102;UBERON:0000924!2.48e-33!102;UBERON:0006601!2.48e-33!102;UBERON:0002346!2.54e-29!71;UBERON:0003075!2.54e-29!71;UBERON:0007284!2.54e-29!71;UBERON:0000033!1.72e-25!63;UBERON:0001049!1.98e-24!52;UBERON:0005068!1.98e-24!52;UBERON:0006241!1.98e-24!52;UBERON:0007135!1.98e-24!52;UBERON:0000955!4.76e-23!50;UBERON:0006238!4.76e-23!50;UBERON:0002616!1.84e-22!49;UBERON:0003056!5.94e-21!49;UBERON:0002020!6.61e-18!34;UBERON:0003080!1.04e-17!40;UBERON:0002780!4.51e-17!39;UBERON:0001890!4.51e-17!39;UBERON:0006240!4.51e-17!39;UBERON:0002791!9.29e-15!29;UBERON:0003528!9.29e-15!29;UBERON:0001893!9.29e-15!29;UBERON:0007811!3.65e-12!86;UBERON:0000153!4.13e-12!94;UBERON:0000956!7.64e-10!21;UBERON:0001869!7.64e-10!21;UBERON:0000203!7.64e-10!21;UBERON:0000468!1.71e-09!333;UBERON:0002619!1.50e-07!17;UBERON:0003076!2.48e-07!12;UBERON:0003057!2.48e-07!12;UBERON:0000025!2.90e-07!114;UBERON:0000922!6.69e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.61e-35,73;UBERON:0001016,3.32e-34,75;UBERON:0004121,6.86e-33,95;UBERON:0000924,6.86e-33,95;UBERON:0006601,6.86e-33,95;UBERON:0002346,8.41e-30,64;UBERON:0003075,8.41e-30,64;UBERON:0007284,8.41e-30,64;UBERON:0010371,7.42e-27,73;UBERON:0000073,3.21e-26,54;UBERON:0010314,1.78e-25,92;UBERON:0001049,8.85e-25,52;UBERON:0005068,8.85e-25,52;UBERON:0006241,8.85e-25,52;UBERON:0007135,8.85e-25,52;UBERON:0000955,2.33e-21,47;UBERON:0006238,2.33e-21,47;UBERON:0003056,3.00e-21,49;UBERON:0002616,8.94e-21,46;UBERON:0002020,3.72e-18,34;UBERON:0003080,5.87e-18,40;UBERON:0002780,2.61e-17,39;UBERON:0001890,2.61e-17,39;UBERON:0006240,2.61e-17,39;UBERON:0003528,5.85e-15,29;UBERON:0002791,5.85e-15,29;UBERON:0001893,5.85e-15,29;UBERON:0000956,5.71e-10,21;UBERON:0001869,5.71e-10,21;UBERON:0000203,5.71e-10,21;UBERON:0002619,1.22e-07,17;UBERON:0003076,2.02e-07,12;UBERON:0003057,2.02e-07,12;UBERON:0000922,3.91e-07,320;UBERON:0000025,6.23e-07,114
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|short_description=p1@Podxl2
}}
}}

Latest revision as of 21:30, 1 October 2015

Short description:p1@Podxl2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Podxl2_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_ENSMUST00000153852, uc009cvw.1_5end
EntrezGene:Podxl2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Podxl2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.58
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.96
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.69
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B757.11
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.76
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.71
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C395.09
Mouse Granule cells, donor2.CNhs12357.11731-123E384.11
Mouse Granule cells, donor3.CNhs12108.11636-122C7113.46
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.76
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C819.47
Mouse Microglia, donor2.CNhs12634.11736-123E825.36
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5100.48
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F587.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D981.19
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F184.55
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D566.48
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D254.02
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F245.33
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D668.02
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D355.06
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F372.65
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D773.73
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D472.80
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F467.61
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D872.93
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4104.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5120.99
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I689.23
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D648.91
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F658.37
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E189.47
Mouse Schwann, donor1.CNhs12507.11728-123D91.89
Mouse Schwann, donor2.CNhs12573.11746-123F92.72
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.17
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D713.51
adrenal gland, embryo E14.CNhs11038.406-44C57.98
adrenal gland, embryo E16.CNhs11004.1254-43D66.70
adrenal gland, embryo E17.CNhs11043.1263-45I16.46
adrenal gland, embryo E18.CNhs11026.1262-18F56.48
adrenal gland, neonate N00.CNhs11191.1311-23C16.82
adrenal gland, neonate N25.CNhs11223.1377-27I38.92
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F511.81
bone (os femoris), neonate N16.CNhs11225.1525-43A67.95
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B231.03
cerebellum, neonate N30.CNhs11135.1395-42I244.40
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A471.45
corpus striatum, adult.CNhs10487.19-21D821.50
corpus striatum, neonate N00.CNhs11226.630-43F185.07
cortex, adult.CNhs10473.12-14D527.12
cortex, neonate N30.CNhs11107.1392-42F237.08
diencephalon, adult.CNhs10482.20-12F251.32
diencephalon, neonate N30.CNhs11201.1388-42B237.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B113.44
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.10
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G47.79
eyeball, embryo E12.CNhs11016.345-16C69.76
eyeball, embryo E14.CNhs10521.399-16E222.76
eyeball, embryo E15.CNhs10593.426-16C917.29
eyeball, embryo E17.CNhs11023.1261-18D424.87
eyeball, neonate N00.CNhs11207.633-15C635.72
eyeball, neonate N01.CNhs11140.1532-43E734.85
eyeball, neonate N02.CNhs11205.1551-44G848.07
eyeball, neonate N16.CNhs11188.777-19A227.94
forelimb, embryo E11.CNhs10596.335-25E25.17
forelimb, embryo E12.CNhs10600.359-14H25.67
forelimb, embryo E13.CNhs10589.384-1E27.92
forelimb, embryo E14.CNhs10577.413-26A88.33
forelimb, embryo E15.CNhs11007.437-20E713.07
forelimb, embryo E17.CNhs10598.1517-43C49.40
forelimb, embryo E18.CNhs11008.1520-43B55.76
gonad, embryo E13.CNhs11044.1564-45I67.76
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.31
heart, embryo E12.CNhs11015.353-12F55.86
heart, embryo E13.CNhs11013.376-3I95.58
heart, embryo E14.CNhs10597.403-26D44.02
heart, embryo E15.CNhs11017.431-16C85.51
heart, embryo E16.CNhs11021.457-17C64.78
heart, embryo E17.CNhs11025.479-18E54.19
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E33.85
heart, neonate N03.CNhs11221.1349-25I27.08
heart, neonate N10.CNhs11118.749-24G19.36
heart, neonate N16.CNhs11209.782-15G16.49
heart, neonate N20.CNhs11127.821-26I64.53
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D23.62
hippocampus, adult.CNhs10478.13-16E822.71
hippocampus, neonate N00.CNhs11228.627-43G166.37
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I58.10
intestine, embryo E13.CNhs11010.381-16D59.52
intestine, embryo E15.CNhs10602.976-16D86.70
intestine, embryo E16.CNhs10585.463-22H43.63
intestine, embryo E17.CNhs10582.482-18D33.56
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E95.27
intestine, neonate N06.CNhs11102.688-20B85.28
intestine, neonate N07.CNhs11095.720-20F28.16
intestine, neonate N10.CNhs11098.755-23A56.63
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I94.17
kidney, embryo E15.CNhs10997.434-16F84.68
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I23.46
kidney, embryo E18.CNhs11001.1288-20C74.65
kidney, neonate N00.CNhs11214.646-21G75.19
kidney, neonate N10.CNhs11206.758-6D56.58
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G28.72
lung, embryo E14.CNhs10604.404-26F84.89
lung, embryo E15.CNhs11020.432-17C53.73
lung, embryo E16.CNhs10998.458-17B63.52
lung, embryo E17.CNhs10605.480-44A63.18
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E55.52
lung, neonate N07.CNhs11111.715-19A39.52
lung, neonate N10.CNhs11219.750-23E69.41
lung, neonate N20.CNhs11109.822-18A42.95
lung, neonate N25.CNhs11119.1359-25C73.80
lung, neonate N30.CNhs11133.1394-42H22.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C261.81
medulla oblongata, neonate N30.CNhs11200.1396-42A367.28
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C215.40
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E119.88
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E221.86
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E335.33
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.25
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D824.06
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D934.54
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D415.38
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D529.23
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D629.65
olfactory brain, adult.CNhs10489.18-22I945.95
ovary, adult.CNhs10507.91-2I72.55
ovary, embryo E18.CNhs11040.505-44H712.64
ovary, neonate N00.CNhs11217.1299-22I412.54
oviduct, adult pregnant day01.CNhs10500.988-6G66.93
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F43.64
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E52.26
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E68.46
pituitary gland, embryo E13.CNhs11009.370-44C715.39
pituitary gland, embryo E14.CNhs11037.398-44A512.65
pituitary gland, embryo E15.CNhs10592.427-16B911.17
pituitary gland, embryo E16.CNhs11036.449-43F618.55
pituitary gland, embryo E17.CNhs11039.1265-44F512.83
pituitary gland, neonate N00.CNhs11190.1308-22E928.62
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G48.23
skin, neonate N03.CNhs11215.662-22H36.03
skin, neonate N06.CNhs11097.693-20I56.09
skin, neonate N10.CNhs11108.762-6C44.43
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C954.89
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C18.05
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E36.33
stomach, embryo E15.CNhs10603.1252-16G86.30
stomach, embryo E16.CNhs11022.459-17D45.08
stomach, embryo E17.CNhs11006.1035-18D58.36
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B85.12
stomach, neonate N07.CNhs11210.718-18A96.69
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F54.34
testis, embryo E15.CNhs11034.443-27C53.97
testis, embryo E16.CNhs11033.470-26G55.44
testis, embryo E17.CNhs11029.486-18I57.62
testis, embryo E18.CNhs11027.503-18G56.08
testis, neonate N00.CNhs11189.1300-22B76.10
testis, neonate N07.CNhs11222.726-26I45.73
testis, neonate N10.CNhs11204.763-44D98.28
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I21.85
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F82.04
thymus, neonate N03.CNhs11137.2104-43C72.81
thymus, neonate N06.CNhs11197.681-26C41.72
thymus, neonate N07.CNhs11211.713-19D33.20
thymus, neonate N10.CNhs11194.748-24E43.53
thymus, neonate N20.CNhs11186.820-7A23.22
thymus, neonate N25.CNhs11125.1362-25G73.27
thymus, neonate N30.CNhs11132.1393-42G23.27
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A124.28
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A233.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A328.64
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D745.71
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.03
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A525.68
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A628.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A733.77
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A836.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A930.03
whole body, embryo E11.CNhs11014.324-5I82.70
whole body, embryo E12.CNhs10587.857-27C917.56
whole body, embryo E13.CNhs10512.372-23H219.63
whole body, embryo E14.5.CNhs10578.420-27D214.83
whole body, embryo E14.CNhs10519.395-14B19.01
whole body, embryo E16.CNhs10514.453-14F29.01
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.80
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G513.14
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G513.18
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G516.01
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G515.85
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G518.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G517.61
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G514.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.25
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G514.64
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G515.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G519.15
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.98
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G520.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.79
whole body, embryo E17.5.CNhs10513.490-9F910.61
whole body, embryo E17.CNhs10517.475-3I537.97
whole body, embryo E18.CNhs10516.493-3B315.21
whole body, neonate N00.CNhs10525.657-19C215.26
whole body, neonate N01.CNhs10576.659-23C67.27
whole body, neonate N06.CNhs10515.692-21D17.94
whole body, neonate N10.CNhs10518.761-6B46.96





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.05e-1933
neuronal stem cell1.05e-1933
neuroblast1.05e-1933
electrically signaling cell1.05e-1933
ectodermal cell7.23e-1944
neurectodermal cell7.23e-1944
neural cell9.61e-1943
electrically responsive cell9.23e-1839
electrically active cell9.23e-1839
CNS neuron (sensu Vertebrata)4.31e-1623
neuroblast (sensu Vertebrata)4.31e-1623

Uber anatomy
Ontology termp-valuen
central nervous system1.61e-3573
nervous system3.32e-3475
ectoderm-derived structure6.86e-3395
ectoderm6.86e-3395
presumptive ectoderm6.86e-3395
neurectoderm8.41e-3064
neural plate8.41e-3064
presumptive neural plate8.41e-3064
ecto-epithelium7.42e-2773
regional part of nervous system3.21e-2654
structure with developmental contribution from neural crest1.78e-2592
neural tube8.85e-2552
neural rod8.85e-2552
future spinal cord8.85e-2552
neural keel8.85e-2552
brain2.33e-2147
future brain2.33e-2147
pre-chordal neural plate3.00e-2149
regional part of brain8.94e-2146
gray matter3.72e-1834
anterior neural tube5.87e-1840
regional part of forebrain2.61e-1739
forebrain2.61e-1739
future forebrain2.61e-1739
brain grey matter5.85e-1529
regional part of telencephalon5.85e-1529
telencephalon5.85e-1529
cerebral cortex5.71e-1021
cerebral hemisphere5.71e-1021
pallium5.71e-1021
regional part of cerebral cortex1.22e-0717
posterior neural tube2.02e-0712
chordal neural plate2.02e-0712
embryo3.91e-07320
tube6.23e-07114
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