FFCP PHASE1:Mm9::chr7:120909633..120909713,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:120909633..120909713,+
|short_description=p1@Spon1
|description=CAGE_peak_1_at_Spon1_5end
|association_with_transcript=0bp_to_ENSMUST00000084696_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=233744 | |EntrezGene=233744 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1837 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UYD7 | |UniProt=Q3UYD7 | ||
|association_with_transcript=0bp_to_ENSMUST00000084696_5end | |||
|cluster_id=chr7:120909633..120909713,+ | |||
|description=CAGE_peak_1_at_Spon1_5end | |||
|id=chr7:120909633..120909713,+ | |||
|ontology_enrichment_celltype=CL:0000540!4.01e-09!33;CL:0000047!4.01e-09!33;CL:0000031!4.01e-09!33;CL:0000404!4.01e-09!33;CL:0000393!2.43e-08!39;CL:0000211!2.43e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.36e-09,33;CL:0000047,3.36e-09,33;CL:0000031,3.36e-09,33;CL:0000404,3.36e-09,33;CL:0000393,5.44e-08,39;CL:0000211,5.44e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.08e-16!102;UBERON:0000924!1.08e-16!102;UBERON:0006601!1.08e-16!102;UBERON:0001017!3.35e-14!73;UBERON:0005743!3.35e-14!73;UBERON:0000073!4.62e-13!75;UBERON:0001016!4.62e-13!75;UBERON:0000468!1.26e-11!333;UBERON:0002346!1.68e-11!71;UBERON:0003075!1.68e-11!71;UBERON:0007284!1.68e-11!71;UBERON:0000922!4.70e-09!328;UBERON:0000033!5.86e-09!63;UBERON:0000025!2.08e-08!114;UBERON:0004111!3.98e-08!122;UBERON:0001049!1.85e-07!52;UBERON:0005068!1.85e-07!52;UBERON:0006241!1.85e-07!52;UBERON:0007135!1.85e-07!52;UBERON:0000479!2.67e-07!349;UBERON:0003056!3.03e-07!49;UBERON:0007100!5.94e-07!18;UBERON:0000948!5.94e-07!18;UBERON:0005498!5.94e-07!18;UBERON:0004140!5.94e-07!18;UBERON:0009881!5.94e-07!18;UBERON:0004141!5.94e-07!18;UBERON:0003084!5.94e-07!18;UBERON:0007005!5.94e-07!18;UBERON:0004139!5.94e-07!18;UBERON:0004291!5.94e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.26e-16,95;UBERON:0000924,1.26e-16,95;UBERON:0006601,1.26e-16,95;UBERON:0010314,1.87e-16,92;UBERON:0001017,6.13e-14,73;UBERON:0001016,1.28e-12,75;UBERON:0002346,9.76e-12,64;UBERON:0003075,9.76e-12,64;UBERON:0007284,9.76e-12,64;UBERON:0010371,2.15e-11,73;UBERON:0000073,4.25e-08,54;UBERON:0000025,1.31e-07,114;UBERON:0004111,2.33e-07,122;UBERON:0000922,3.02e-07,320;UBERON:0001049,3.27e-07,52;UBERON:0005068,3.27e-07,52;UBERON:0006241,3.27e-07,52;UBERON:0007135,3.27e-07,52;UBERON:0003056,4.02e-07,49;UBERON:0007100,5.23e-07,18;UBERON:0000948,5.23e-07,18;UBERON:0005498,5.23e-07,18;UBERON:0004140,5.23e-07,18;UBERON:0009881,5.23e-07,18;UBERON:0004141,5.23e-07,18;UBERON:0003084,5.23e-07,18;UBERON:0007005,5.23e-07,18;UBERON:0004139,5.23e-07,18;UBERON:0004291,5.23e-07,18;UBERON:0000479,7.42e-07,349 | |||
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| ||
|short_description=p1@Spon1 | |||
}} | }} |
Latest revision as of 18:20, 25 September 2015
Short description: | p1@Spon1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Spon1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1837 |
Association with transcript: | 0bp_to_ENSMUST00000084696_5end |
EntrezGene: | Spon1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.36e-09 | 33 |
neuronal stem cell | 3.36e-09 | 33 |
neuroblast | 3.36e-09 | 33 |
electrically signaling cell | 3.36e-09 | 33 |
electrically responsive cell | 5.44e-08 | 39 |
electrically active cell | 5.44e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.26e-16 | 95 |
ectoderm | 1.26e-16 | 95 |
presumptive ectoderm | 1.26e-16 | 95 |
structure with developmental contribution from neural crest | 1.87e-16 | 92 |
central nervous system | 6.13e-14 | 73 |
nervous system | 1.28e-12 | 75 |
neurectoderm | 9.76e-12 | 64 |
neural plate | 9.76e-12 | 64 |
presumptive neural plate | 9.76e-12 | 64 |
ecto-epithelium | 2.15e-11 | 73 |
regional part of nervous system | 4.25e-08 | 54 |
tube | 1.31e-07 | 114 |
anatomical conduit | 2.33e-07 | 122 |
embryo | 3.02e-07 | 320 |
neural tube | 3.27e-07 | 52 |
neural rod | 3.27e-07 | 52 |
future spinal cord | 3.27e-07 | 52 |
neural keel | 3.27e-07 | 52 |
pre-chordal neural plate | 4.02e-07 | 49 |
primary circulatory organ | 5.23e-07 | 18 |
heart | 5.23e-07 | 18 |
primitive heart tube | 5.23e-07 | 18 |
primary heart field | 5.23e-07 | 18 |
anterior lateral plate mesoderm | 5.23e-07 | 18 |
heart tube | 5.23e-07 | 18 |
heart primordium | 5.23e-07 | 18 |
cardiac mesoderm | 5.23e-07 | 18 |
cardiogenic plate | 5.23e-07 | 18 |
heart rudiment | 5.23e-07 | 18 |
tissue | 7.42e-07 | 349 |