FFCP PHASE1:Mm9::chr7:139508746..139508812,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:139508746..139508812,-
|short_description=p3@Chst15
|description=CAGE_peak_3_at_Chst15_5end
|association_with_transcript=25bp_to_NM_029935,uc009kby.1_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=77590 | |EntrezGene=77590 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=90 | |||
|TSSclassifier=NA | |||
|UniProt=Q91XQ5 | |UniProt=Q91XQ5 | ||
|association_with_transcript=25bp_to_NM_029935,uc009kby.1_5end | |||
|cluster_id=chr7:139508746..139508812,- | |||
|description=CAGE_peak_3_at_Chst15_5end | |||
|id=chr7:139508746..139508812,- | |||
|ontology_enrichment_celltype=CL:0000117!1.88e-07!23;CL:0000337!1.88e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.17e-07,23;CL:0000337,1.17e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.70e-14!52;UBERON:0005068!3.70e-14!52;UBERON:0006241!3.70e-14!52;UBERON:0007135!3.70e-14!52;UBERON:0002020!2.41e-13!34;UBERON:0000955!9.26e-13!50;UBERON:0006238!9.26e-13!50;UBERON:0000033!1.33e-12!63;UBERON:0002616!3.57e-12!49;UBERON:0002346!1.02e-11!71;UBERON:0003075!1.02e-11!71;UBERON:0007284!1.02e-11!71;UBERON:0002791!1.58e-11!29;UBERON:0003528!1.58e-11!29;UBERON:0001893!1.58e-11!29;UBERON:0000956!1.29e-10!21;UBERON:0001869!1.29e-10!21;UBERON:0000203!1.29e-10!21;UBERON:0004121!1.90e-10!102;UBERON:0000924!1.90e-10!102;UBERON:0006601!1.90e-10!102;UBERON:0003080!4.99e-10!40;UBERON:0001017!1.37e-09!73;UBERON:0005743!1.37e-09!73;UBERON:0002780!1.44e-09!39;UBERON:0001890!1.44e-09!39;UBERON:0006240!1.44e-09!39;UBERON:0000153!3.38e-09!94;UBERON:0003056!3.98e-09!49;UBERON:0000073!1.59e-08!75;UBERON:0001016!1.59e-08!75;UBERON:0002619!3.29e-08!17;UBERON:0000475!8.83e-08!200;UBERON:0007811!2.31e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.49e-14,52;UBERON:0005068,2.49e-14,52;UBERON:0006241,2.49e-14,52;UBERON:0007135,2.49e-14,52;UBERON:0000073,3.35e-14,54;UBERON:0002020,1.99e-13,34;UBERON:0010371,2.07e-13,73;UBERON:0000955,2.01e-12,47;UBERON:0006238,2.01e-12,47;UBERON:0002616,8.01e-12,46;UBERON:0002346,1.34e-11,64;UBERON:0003075,1.34e-11,64;UBERON:0007284,1.34e-11,64;UBERON:0003528,1.50e-11,29;UBERON:0002791,1.50e-11,29;UBERON:0001893,1.50e-11,29;UBERON:0000956,1.42e-10,21;UBERON:0001869,1.42e-10,21;UBERON:0000203,1.42e-10,21;UBERON:0004121,2.01e-10,95;UBERON:0000924,2.01e-10,95;UBERON:0006601,2.01e-10,95;UBERON:0001017,3.99e-10,73;UBERON:0003080,4.26e-10,40;UBERON:0002780,1.26e-09,39;UBERON:0001890,1.26e-09,39;UBERON:0006240,1.26e-09,39;UBERON:0001016,3.77e-09,75;UBERON:0003056,5.32e-09,49;UBERON:0002619,4.23e-08,17;UBERON:0010314,4.06e-07,92;UBERON:0002021,8.76e-07,10;UBERON:0000411,8.76e-07,10;UBERON:0001950,8.76e-07,10 | |||
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| ||
|short_description=p3@Chst15 | |||
}} | }} |
Latest revision as of 00:57, 26 September 2015
Short description: | p3@Chst15 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Chst15_5end |
Coexpression cluster: | MCL_coexpression_mm9:90 |
Association with transcript: | 25bp_to_NM_029935, uc009kby.1_5end |
EntrezGene: | Chst15 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.17e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.17e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
neural tube | 2.49e-14 | 52 |
neural rod | 2.49e-14 | 52 |
future spinal cord | 2.49e-14 | 52 |
neural keel | 2.49e-14 | 52 |
regional part of nervous system | 3.35e-14 | 54 |
gray matter | 1.99e-13 | 34 |
ecto-epithelium | 2.07e-13 | 73 |
brain | 2.01e-12 | 47 |
future brain | 2.01e-12 | 47 |
regional part of brain | 8.01e-12 | 46 |
neurectoderm | 1.34e-11 | 64 |
neural plate | 1.34e-11 | 64 |
presumptive neural plate | 1.34e-11 | 64 |
brain grey matter | 1.50e-11 | 29 |
regional part of telencephalon | 1.50e-11 | 29 |
telencephalon | 1.50e-11 | 29 |
cerebral cortex | 1.42e-10 | 21 |
cerebral hemisphere | 1.42e-10 | 21 |
pallium | 1.42e-10 | 21 |
ectoderm-derived structure | 2.01e-10 | 95 |
ectoderm | 2.01e-10 | 95 |
presumptive ectoderm | 2.01e-10 | 95 |
central nervous system | 3.99e-10 | 73 |
anterior neural tube | 4.26e-10 | 40 |
regional part of forebrain | 1.26e-09 | 39 |
forebrain | 1.26e-09 | 39 |
future forebrain | 1.26e-09 | 39 |
nervous system | 3.77e-09 | 75 |
pre-chordal neural plate | 5.32e-09 | 49 |
regional part of cerebral cortex | 4.23e-08 | 17 |
structure with developmental contribution from neural crest | 4.06e-07 | 92 |
occipital lobe | 8.76e-07 | 10 |
visual cortex | 8.76e-07 | 10 |
neocortex | 8.76e-07 | 10 |