Personal tools

FFCP PHASE1:Mm9::chr7:30094448..30094481,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr7:30094448..30094481,+ |short_description=p4@Dpf1 |description=CAGE_peak_4_at_Dpf1_5end |association_with_transcript=-50bp_to_ENSMUST00000137848_5end |Entre...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr7:30094448..30094481,+
|DHSsupport=NA
|short_description=p4@Dpf1
|DPIdataset=NA
|description=CAGE_peak_4_at_Dpf1_5end
|association_with_transcript=-50bp_to_ENSMUST00000137848_5end
|EntrezGene=29861
|EntrezGene=29861
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=F6UJZ6
|UniProt=F6UJZ6
|association_with_transcript=-50bp_to_ENSMUST00000137848_5end
|cluster_id=chr7:30094448..30094481,+
|description=CAGE_peak_4_at_Dpf1_5end
|id=chr7:30094448..30094481,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000128,7.05e-09,6;CL:0000126,7.05e-09,6;CL:0000127,7.05e-09,6;CL:0002453,8.86e-09,8;CL:0000333,8.56e-07,10;CL:0000095,8.56e-07,10;CL:0000243,8.56e-07,10;CL:0000123,8.56e-07,10;CL:0000125,8.56e-07,10;CL:0000030,8.56e-07,10;CL:0000339,8.56e-07,10
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!7.09e-19!50;UBERON:0006238!7.09e-19!50;UBERON:0002616!3.84e-18!49;UBERON:0001049!1.04e-15!52;UBERON:0005068!1.04e-15!52;UBERON:0006241!1.04e-15!52;UBERON:0007135!1.04e-15!52;UBERON:0001017!1.15e-15!73;UBERON:0005743!1.15e-15!73;UBERON:0000073!3.59e-15!75;UBERON:0001016!3.59e-15!75;UBERON:0000033!2.54e-14!63;UBERON:0003080!4.06e-13!40;UBERON:0002780!1.39e-12!39;UBERON:0001890!1.39e-12!39;UBERON:0006240!1.39e-12!39;UBERON:0002791!5.89e-12!29;UBERON:0003528!5.89e-12!29;UBERON:0001893!5.89e-12!29;UBERON:0007811!2.32e-11!86;UBERON:0000153!4.98e-11!94;UBERON:0002020!7.65e-11!34;UBERON:0003056!1.07e-10!49;UBERON:0002346!1.20e-10!71;UBERON:0003075!1.20e-10!71;UBERON:0007284!1.20e-10!71;UBERON:0004121!3.19e-10!102;UBERON:0000924!3.19e-10!102;UBERON:0006601!3.19e-10!102;UBERON:0000956!2.95e-09!21;UBERON:0001869!2.95e-09!21;UBERON:0000203!2.95e-09!21;UBERON:0002619!3.33e-09!17;UBERON:0002021!2.59e-08!10;UBERON:0000411!2.59e-08!10;UBERON:0001950!2.59e-08!10;UBERON:0000025!7.91e-08!114;UBERON:0004111!4.51e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0000955,5.07e-24,47;UBERON:0006238,5.07e-24,47;UBERON:0000073,2.97e-23,54;UBERON:0002616,1.39e-22,46;UBERON:0001017,1.02e-21,73;UBERON:0001016,7.12e-21,75;UBERON:0001049,1.77e-20,52;UBERON:0005068,1.77e-20,52;UBERON:0006241,1.77e-20,52;UBERON:0007135,1.77e-20,52;UBERON:0003080,1.24e-17,40;UBERON:0002021,1.78e-17,10;UBERON:0000411,1.78e-17,10;UBERON:0001950,1.78e-17,10;UBERON:0002780,1.49e-16,39;UBERON:0001890,1.49e-16,39;UBERON:0006240,1.49e-16,39;UBERON:0002619,1.10e-15,17;UBERON:0003528,1.19e-15,29;UBERON:0002791,1.19e-15,29;UBERON:0001893,1.19e-15,29;UBERON:0002346,4.17e-15,64;UBERON:0003075,4.17e-15,64;UBERON:0007284,4.17e-15,64;UBERON:0004121,2.08e-14,95;UBERON:0000924,2.08e-14,95;UBERON:0006601,2.08e-14,95;UBERON:0000956,3.47e-14,21;UBERON:0001869,3.47e-14,21;UBERON:0000203,3.47e-14,21;UBERON:0003056,3.49e-13,49;UBERON:0002020,1.35e-12,34;UBERON:0010371,2.90e-12,73;UBERON:0010314,7.98e-10,92;UBERON:0000025,1.14e-07,114
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,4.44521471421742,7.99584223859941,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,3.12956537739216,1.52617609466313,1.75748946187577,1.94429899074283,1.53985063787899,2.87505128729943,0,0,0,1.28629718017973,0.85960031981627,4.12537673821954,0.202316460859598,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0.599200221036809,2.30530983192933,0.414758449233911,0.945041568321835,0,0,0.220868540951614,0.367472397644862,0.670918297127655,0,6.60695285996332,3.44755812830007,2.4577045320999,0.791317726381163,0.365950574409639,1.04182674111352,0.279182999001381,1.68828783009504,3.36156145108982,0.294628585473668,0.284743361598206,0.372798891650601,0.075726193333184,0.0755715601067855,0.579728977403356,0,0,0,0,0.448026887097336,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.352766121407114,0,0.247194967734374,0.144599356919912,0,0.323533699894818,0.441683036920787,0.484875253135222,0,3.22058876712702,1.8850203613211,0.255457055208591,0,0,0,1.9472783122627,6.8625090422794,0.879580464790051,7.82209440865244,8.18289463457058,3.74018480207208,4.54275536589721,0.305518091550949,0.124406970610093,0,0.420883711772948,0,0.229902104433473,0,0.30140963567143,0.204109497453984,0,0.187403449119458,0.258703370739016,0,0,0.527853372491847,0.219195732427575,0.556094498451196,0.348252166522167,1.23469281844766,0.59710280045548,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,14.7202963994889,0.720332286654991,0,0,0.426576501070468,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0,0.196558995113203,0,0.202860121388503,1.20588579876208,0.50925170356284,0.287696137450811,0,0,0,1.48856379067401,0.936113019343682,0.505157755894224,0.717589654087649,0.964887042726734,0.369506380333209,0,0,0.678980343100753,0.234690248288502,0.335012514883631,0,0.585400943573396,0.472905432318573,0,0.159454768657487,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0,0,0.80275294993896,1.40654023910644,0,2.01976741763498,0,0,0.430846795465598,0,0,0,0,0,0.790575555893047,8.67567554338879,0.567760340833074,0.178065603667255,0.977321756121456,0.494910368917606,1.32745138339963,0,0,1.69744571780308,1.18120757152309,2.15204603560749,0.516856586336442,0,0.356497378384721,1.58018378967908,2.10837217149998,0,2.7235168460303,0.18006109403131,0.517434735131018,0.214337035031592,0.177340233642274,0.178368817602071,0,2.13125464380219,0,0,0.441056796109924,0.32977250588296,0.161464426695906,0.241251699712623,0,0.164140899745061,0.291480836629851,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0.218362563746178,0.269728692769641,0.0826534557253359,0.26175594198403,0,0,0.56369293868419,0.598066184175915,0.165458490457098,0.194451188344048,0.645799117388655,0.168956125490778,0.58678619322877,0.5208175393758,1.67774951081137,0.966336483304024,1.15212002503146,0,0.202725215290164,0.102710957164827,0.25984164595559,0.895133478337407,1.58945083825012,0.240390899039938,0.738447635872886,0.706765149637033,1.06689529317,0.806609481094724,0.38983152295901,0.384847366561318,0.350630706544707,0.680191150845634,0,0.0897138566094757,0,0.965947970160952,0.187682475451182,0,0,0,2.25900737046827,7.82552902062201,6.87474616127276,2.40594455281163,6.85082519770642,12.0863023582352,10.1253375034771,10.3573876741571,10.8754178156209,6.73088405277366,0.415149390336707,0,0,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,0.824140228955577,0,0.505394423527595,0,0.188626341386076,0.37456602987953,0.512201219238954,0.402048282689293,0.952587382566147,0.927074607558844,0.38581844092741,0.412085900803307,0.883193520806384,0,0.887379030796687,0.476872379894642,0.436039249896986,0.188218760830661,0.338458431566706,0.365855945745545,0.526139422875686,0.271608227691724,1.12228454331548,0.474540072496697,0,0.409231043169689,0.309873682371932,0.192906610981141,0.249810577937946,0.701794825336225,0.429742108096597,0.57386499620653,1.10295709559758,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,4.44521471421742,7.99584223859941,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,3.12956537739216,1.52617609466313,1.75748946187577,1.94429899074283,1.53985063787899,2.87505128729943,0,0,0,1.28629718017973,0.85960031981627,4.12537673821954,0.202316460859598,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0.599200221036809,2.30530983192933,0.414758449233911,0.945041568321835,0,0,0.220868540951614,0.367472397644862,0.670918297127655,0,6.60695285996332,3.44755812830007,2.4577045320999,0.791317726381163,0.365950574409639,1.04182674111352,0.279182999001381,1.68828783009504,3.36156145108982,0.294628585473668,0.284743361598206,0.372798891650601,0.075726193333184,0.0755715601067855,0.579728977403356,0,0,0,0,0.448026887097336,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.352766121407114,0,0.247194967734374,0.144599356919912,0,0.323533699894818,0.441683036920787,0.484875253135222,0,3.22058876712702,1.8850203613211,0.255457055208591,0,0,0,1.9472783122627,6.8625090422794,0.879580464790051,7.82209440865244,8.18289463457058,3.74018480207208,4.54275536589721,0.305518091550949,0.124406970610093,0,0.420883711772948,0,0.229902104433473,0,0.30140963567143,0.204109497453984,0,0.187403449119458,0.258703370739016,0,0,0.527853372491847,0.219195732427575,0.556094498451196,0.348252166522167,1.23469281844766,0.59710280045548,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,14.7202963994889,0.720332286654991,0,0,0.426576501070468,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0,0.196558995113203,0,0.202860121388503,1.20588579876208,0.50925170356284,0.287696137450811,0,0,0,1.48856379067401,0.936113019343682,0.505157755894224,0.717589654087649,0.964887042726734,0.369506380333209,0,0,0.678980343100753,0.234690248288502,0.335012514883631,0,0.585400943573396,0.472905432318573,0,0.159454768657487,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0,0,0.80275294993896,1.40654023910644,0,2.01976741763498,0,0,0.430846795465598,0,0,0,0,0,0.790575555893047,8.67567554338879,0.567760340833074,0.178065603667255,0.977321756121456,0.494910368917606,1.32745138339963,0,0,1.69744571780308,1.18120757152309,2.15204603560749,0.516856586336442,0,0.356497378384721,1.58018378967908,2.10837217149998,0,2.7235168460303,0.18006109403131,0.517434735131018,0.214337035031592,0.177340233642274,0.178368817602071,0,2.13125464380219,0,0,0.441056796109924,0.32977250588296,0.161464426695906,0.241251699712623,0,0.164140899745061,0.291480836629851,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0.218362563746178,0.269728692769641,0.0826534557253359,0.26175594198403,0,0,0.56369293868419,0.598066184175915,0.165458490457098,0.194451188344048,0.645799117388655,0.168956125490778,0.58678619322877,0.5208175393758,1.67774951081137,0.966336483304024,1.15212002503146,0,0.202725215290164,0.102710957164827,0.25984164595559,0.895133478337407,1.58945083825012,0.240390899039938,0.738447635872886,0.706765149637033,1.06689529317,0.806609481094724,0.38983152295901,0.384847366561318,0.350630706544707,0.680191150845634,0,0.0897138566094757,0,0.965947970160952,0.187682475451182,0,0,0,2.25900737046827,7.82552902062201,6.87474616127276,2.40594455281163,6.85082519770642,12.0863023582352,10.1253375034771,10.3573876741571,10.8754178156209,6.73088405277366,0.415149390336707,0,0,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,0.824140228955577,0,0.505394423527595,0,0.188626341386076,0.37456602987953,0.512201219238954,0.402048282689293,0.952587382566147,0.927074607558844,0.38581844092741,0.412085900803307,0.883193520806384,0,0.887379030796687,0.476872379894642,0.436039249896986,0.188218760830661,0.338458431566706,0.365855945745545,0.526139422875686,0.271608227691724,1.12228454331548,0.474540072496697,0,0.409231043169689,0.309873682371932,0.192906610981141,0.249810577937946,0.701794825336225,0.429742108096597,0.57386499620653,1.10295709559758,0.231867835620421
|short_description=p4@Dpf1
}}
}}

Latest revision as of 13:55, 26 September 2015

Short description:p4@Dpf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Dpf1_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: -50bp_to_ENSMUST00000137848_5end
EntrezGene:Dpf1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Dpf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D57.82
cortex, neonate N30.CNhs11107.1392-42F28.18
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B24.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E814.72
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I98.68
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D91.68
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D31.07
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
brain5.07e-2447
future brain5.07e-2447
regional part of nervous system2.97e-2354
regional part of brain1.39e-2246
central nervous system1.02e-2173
nervous system7.12e-2175
neural tube1.77e-2052
neural rod1.77e-2052
future spinal cord1.77e-2052
neural keel1.77e-2052
anterior neural tube1.24e-1740
occipital lobe1.78e-1710
visual cortex1.78e-1710
neocortex1.78e-1710
regional part of forebrain1.49e-1639
forebrain1.49e-1639
future forebrain1.49e-1639
regional part of cerebral cortex1.10e-1517
brain grey matter1.19e-1529
regional part of telencephalon1.19e-1529
telencephalon1.19e-1529
neurectoderm4.17e-1564
neural plate4.17e-1564
presumptive neural plate4.17e-1564
ectoderm-derived structure2.08e-1495
ectoderm2.08e-1495
presumptive ectoderm2.08e-1495
cerebral cortex3.47e-1421
cerebral hemisphere3.47e-1421
pallium3.47e-1421
pre-chordal neural plate3.49e-1349
gray matter1.35e-1234
ecto-epithelium2.90e-1273
structure with developmental contribution from neural crest7.98e-1092
tube1.14e-07114
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:30094448..30094481,%2B&oldid=4256777"