FFCP PHASE1:Mm9::chr7:36539413..36539453,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:36539413..36539453,-
|short_description=p1@Dpy19l3
|description=CAGE_peak_1_at_Dpy19l3_5end
|association_with_transcript=0bp_to_ENSMUST00000155993_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=233115 | |EntrezGene=233115 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000155993_5end | |||
|cluster_id=chr7:36539413..36539453,- | |||
|description=CAGE_peak_1_at_Dpy19l3_5end | |||
|id=chr7:36539413..36539453,- | |||
|ontology_enrichment_celltype=CL:0000055!2.95e-11!50;CL:0002319!6.24e-11!43;CL:0000221!1.30e-10!44;CL:0000133!1.30e-10!44;CL:0000117!3.36e-10!23;CL:0000337!3.36e-10!23;CL:0000393!4.09e-10!39;CL:0000211!4.09e-10!39;CL:0000540!3.66e-09!33;CL:0000047!3.66e-09!33;CL:0000031!3.66e-09!33;CL:0000404!3.66e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.24e-11,43;CL:0000221,1.30e-10,44;CL:0000133,1.30e-10,44;CL:0000117,3.36e-10,23;CL:0000337,3.36e-10,23;CL:0000393,4.09e-10,39;CL:0000211,4.09e-10,39;CL:0000540,3.66e-09,33;CL:0000047,3.66e-09,33;CL:0000031,3.66e-09,33;CL:0000404,3.66e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.05e-23,75;UBERON:0001017,3.03e-23,73;UBERON:0000073,7.50e-21,54;UBERON:0001049,1.48e-19,52;UBERON:0005068,1.48e-19,52;UBERON:0006241,1.48e-19,52;UBERON:0007135,1.48e-19,52;UBERON:0002346,2.11e-18,64;UBERON:0003075,2.11e-18,64;UBERON:0007284,2.11e-18,64;UBERON:0003080,4.98e-18,40;UBERON:0002780,8.65e-18,39;UBERON:0001890,8.65e-18,39;UBERON:0006240,8.65e-18,39;UBERON:0004121,1.09e-17,95;UBERON:0000924,1.09e-17,95;UBERON:0006601,1.09e-17,95;UBERON:0002020,1.60e-17,34;UBERON:0000955,1.84e-17,47;UBERON:0006238,1.84e-17,47;UBERON:0002616,3.97e-17,46;UBERON:0003056,1.46e-16,49;UBERON:0003528,6.69e-15,29;UBERON:0002791,6.69e-15,29;UBERON:0001893,6.69e-15,29;UBERON:0010371,6.96e-15,73;UBERON:0000956,9.16e-13,21;UBERON:0001869,9.16e-13,21;UBERON:0000203,9.16e-13,21;UBERON:0010314,2.88e-10,92;UBERON:0002619,4.19e-10,17;UBERON:0002021,4.04e-07,10;UBERON:0000411,4.04e-07,10;UBERON:0001950,4.04e-07,10;UBERON:0000025,9.88e-07,114 | |||
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| ||
|short_description=p1@Dpy19l3 | |||
}} | }} |
Latest revision as of 16:59, 26 September 2015
Short description: | p1@Dpy19l3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dpy19l3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000155993_5end |
EntrezGene: | Dpy19l3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.24e-11 | 43 |
ectodermal cell | 1.30e-10 | 44 |
neurectodermal cell | 1.30e-10 | 44 |
CNS neuron (sensu Vertebrata) | 3.36e-10 | 23 |
neuroblast (sensu Vertebrata) | 3.36e-10 | 23 |
electrically responsive cell | 4.09e-10 | 39 |
electrically active cell | 4.09e-10 | 39 |
neuron | 3.66e-09 | 33 |
neuronal stem cell | 3.66e-09 | 33 |
neuroblast | 3.66e-09 | 33 |
electrically signaling cell | 3.66e-09 | 33 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.05e-23 | 75 |
central nervous system | 3.03e-23 | 73 |
regional part of nervous system | 7.50e-21 | 54 |
neural tube | 1.48e-19 | 52 |
neural rod | 1.48e-19 | 52 |
future spinal cord | 1.48e-19 | 52 |
neural keel | 1.48e-19 | 52 |
neurectoderm | 2.11e-18 | 64 |
neural plate | 2.11e-18 | 64 |
presumptive neural plate | 2.11e-18 | 64 |
anterior neural tube | 4.98e-18 | 40 |
regional part of forebrain | 8.65e-18 | 39 |
forebrain | 8.65e-18 | 39 |
future forebrain | 8.65e-18 | 39 |
ectoderm-derived structure | 1.09e-17 | 95 |
ectoderm | 1.09e-17 | 95 |
presumptive ectoderm | 1.09e-17 | 95 |
gray matter | 1.60e-17 | 34 |
brain | 1.84e-17 | 47 |
future brain | 1.84e-17 | 47 |
regional part of brain | 3.97e-17 | 46 |
pre-chordal neural plate | 1.46e-16 | 49 |
brain grey matter | 6.69e-15 | 29 |
regional part of telencephalon | 6.69e-15 | 29 |
telencephalon | 6.69e-15 | 29 |
ecto-epithelium | 6.96e-15 | 73 |
cerebral cortex | 9.16e-13 | 21 |
cerebral hemisphere | 9.16e-13 | 21 |
pallium | 9.16e-13 | 21 |
structure with developmental contribution from neural crest | 2.88e-10 | 92 |
regional part of cerebral cortex | 4.19e-10 | 17 |
occipital lobe | 4.04e-07 | 10 |
visual cortex | 4.04e-07 | 10 |
neocortex | 4.04e-07 | 10 |
tube | 9.88e-07 | 114 |