FFCP PHASE1:Mm9::chr7:52409803..52409812,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:52409803..52409812,+
|short_description=p4@Pih1d1
|description=CAGE_peak_4_at_Pih1d1_5end
|association_with_transcript=35bp_to_NM_029406,uc009gtw.1_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=68845 | |EntrezGene=68845 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CQJ2 | |UniProt=Q9CQJ2 | ||
|association_with_transcript=35bp_to_NM_029406,uc009gtw.1_5end | |||
|cluster_id=chr7:52409803..52409812,+ | |||
|description=CAGE_peak_4_at_Pih1d1_5end | |||
|id=chr7:52409803..52409812,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.90e-07!23;CL:0000337!4.90e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.04e-11,23;CL:0000337,8.04e-11,23;CL:0002321,5.15e-10,70;CL:0000393,1.31e-09,39;CL:0000211,1.31e-09,39;CL:0000192,1.11e-08,3;CL:0000359,1.11e-08,3;CL:0002539,1.11e-08,3;CL:0000514,1.11e-08,3;CL:0002612,1.33e-08,3;CL:0000723,1.30e-07,91;CL:0000048,1.30e-07,91;CL:0002613,2.10e-07,3;CL:0000540,6.70e-07,33;CL:0000047,6.70e-07,33;CL:0000031,6.70e-07,33;CL:0000404,6.70e-07,33;CL:0000034,7.36e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,9.08e-10,8;UBERON:0007245,9.08e-10,8;UBERON:0010009,9.08e-10,8;UBERON:0010011,9.08e-10,8;UBERON:0000454,9.08e-10,8;UBERON:0002020,2.73e-09,34;UBERON:0001135,1.11e-08,3;UBERON:0004237,1.11e-08,3;UBERON:0004695,1.11e-08,3;UBERON:0002111,1.11e-08,3;UBERON:0004178,1.11e-08,3;UBERON:0002257,1.33e-08,3;UBERON:0001948,1.53e-08,5;UBERON:0002315,1.53e-08,5;UBERON:0000073,6.72e-08,54;UBERON:0000369,2.18e-07,5;UBERON:0002435,2.18e-07,5;UBERON:0000204,2.18e-07,5;UBERON:0010082,2.18e-07,5;UBERON:0001049,3.49e-07,52;UBERON:0005068,3.49e-07,52;UBERON:0006241,3.49e-07,52;UBERON:0007135,3.49e-07,52;UBERON:0002240,4.08e-07,6;UBERON:0005174,4.08e-07,6;UBERON:0001137,4.08e-07,6;UBERON:0001017,7.23e-07,73 | |||
|phase1_expression=0.160148847104794,0.697950815278722,0.454999239389536,0,0,1.00727563147134,0,0.645616617207881,0,0,0,0.398860794976682,0,0.174840804837995,0,0.202475267389826,0,0,0.137114433605739,0,4.08207792725135,0.198581902401771,0,0.95995453676044,0,0,0.86152399231815,0.646413698057667,0.190023419456374,0.252030129759931,0.221730510655305,1.27006134691926,0.61506478758457,0,0,0.332469290716985,0,0,0,0,0,0,0,1.6366586336825,2.23029248682932,2.20256102594018,0,0,0.219686182734472,0.388859798148567,0.839918529752175,0,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,2.42779753031517,0,0.633831403506179,0.338844532069132,0,0,0,0.7104801149461,0.599200221036809,2.30530983192933,0.622137673850866,0.405017814995072,0,1.14260393761521,0.883474163806454,0.122490799214954,0.575072826109418,0,1.10115880999389,0.766124028511126,0.768032666281217,1.05509030184155,1.09785172322892,1.04182674111352,1.11673199600552,0.56276261003168,1.06958773443767,2.35702868378934,1.42371680799103,1.4911955666024,0.302904773332736,0,0.579728977403356,0,1.3599426674155,0,0,1.34408066129201,0.842666520790511,2.89731548382698,2.33807404142582,1.06001872353102,0.422530259330042,2.56652954828636,2.54805239706646,0,0,0.506719730950197,0,1.59857431606684,0.258937883647172,0,0.173485326766136,0.608930956624282,0.461230994512117,0.301445281105245,0,0.251333182659351,0.247194967734374,0.289198713839823,0,0.808834249737046,0,0,0,0.292780797011547,0.83778682725382,0,0.359445373517761,0,0.127070227073065,0.599162557619291,0,1.00523481690292,0.173824320192276,0.255715457330331,0.20778804455956,0.486723789203273,0.203678727700633,0.124406970610093,0,0,0.130120442962704,0.689706313300419,0.360124259610698,0.30140963567143,0.272145996605311,0.384341160854549,0.562210347358373,0,0.215567992932842,0,0.175951124163949,0.43839146485515,0,0,0.411564272815887,0.199034266818493,0.702213187313235,0.257347907114715,0.568326998791185,0.207125772535502,0.469052119962192,0.36012412292203,0,0.196764231747404,0.462801338662135,0.465067889500816,0.268273401399619,0,0.16455984991348,0.32833492815819,0.0810688095458557,0.438599962275997,0,0.268412837520744,0.210289948564127,0.617427674275707,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.201683524623343,0,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.648414149624083,0.398282546508734,0.569003702859245,0,0,0.610953983535943,0.387904974335251,0.350679099451593,0.442655759869801,0.590440591918409,0.156998727841375,0,0,0,0.196558995113203,0.449724224769707,0,0,0,0,1.13494658742525,0.549122826376163,0,0,0.312037673114561,0.505157755894224,0.179397413521912,0,0,0.189491411770485,0.488894929326078,0.169745085775188,0,0.335012514883631,0,0.585400943573396,0.157635144106191,0,0.159454768657487,0.491589944147214,0.345369963731791,0.289298117163023,0,0.54390568381871,0,0,0.321101179975584,0.703270119553219,0.327869890753351,0.504941854408746,0.631016438832513,0.390438744296638,0,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0.329940245945071,0,0.485561272309963,0,0,0.295301892880773,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0.720244376125241,1.03486947026204,0.214337035031592,0.177340233642274,0.356737635204141,0.987294123612726,1.2178597964584,0,0,0.220528398054962,0,0.322928853391811,0.180938774784468,0.119372344003136,0.164140899745061,0.291480836629851,0.741701208042039,0,0,0.185194527369712,0.565105371014073,0.27338845544205,0,0.509935289981566,0,0.414599921413271,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0.165306911450672,0.523511883968059,0.129614973291793,0,16.3470952218415,0.598066184175915,0.165458490457098,0.194451188344048,0.129159823477731,0.337912250981556,0.234714477291508,0.5208175393758,0.209718688851422,7.24752362478018,9.21696020025169,0,0.405450430580328,0.513554785824136,0.129920822977795,0,0.596044064343795,0,0.147689527174577,0,0.228620419965,0.100826185136841,0,0.192423683280659,0,0.226730383615211,0,0.269141569828427,0.335769232728157,0.386379188064381,0,0,0,0,0.564751842617067,0,0,1.03111909406213,1.37016503954128,0,0,1.35096360967266,0,0,0.830298780673413,0.399024873401031,0.341467211508268,0,0.419226325255965,0.551530525350042,0,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0.187283014939765,0,0.287177344778066,0.476293691283074,0.231768651889711,0,0.412085900803307,0,0.685738504770831,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.169229215783353,0.548783918618318,0,0.407412341537585,0,0.237270036248348,0.0985044823755635,0.818462086339379,0.154936841185966,0,0.249810577937946,0,0.429742108096597,0.191288332068843,0.661774257358546,0 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|phase1_expression=0.160148847104794,0.697950815278722,0.454999239389536,0,0,1.00727563147134,0,0.645616617207881,0,0,0,0.398860794976682,0,0.174840804837995,0,0.202475267389826,0,0,0.137114433605739,0,4.08207792725135,0.198581902401771,0,0.95995453676044,0,0,0.86152399231815,0.646413698057667,0.190023419456374,0.252030129759931,0.221730510655305,1.27006134691926,0.61506478758457,0,0,0.332469290716985,0,0,0,0,0,0,0,1.6366586336825,2.23029248682932,2.20256102594018,0,0,0.219686182734472,0.388859798148567,0.839918529752175,0,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,2.42779753031517,0,0.633831403506179,0.338844532069132,0,0,0,0.7104801149461,0.599200221036809,2.30530983192933,0.622137673850866,0.405017814995072,0,1.14260393761521,0.883474163806454,0.122490799214954,0.575072826109418,0,1.10115880999389,0.766124028511126,0.768032666281217,1.05509030184155,1.09785172322892,1.04182674111352,1.11673199600552,0.56276261003168,1.06958773443767,2.35702868378934,1.42371680799103,1.4911955666024,0.302904773332736,0,0.579728977403356,0,1.3599426674155,0,0,1.34408066129201,0.842666520790511,2.89731548382698,2.33807404142582,1.06001872353102,0.422530259330042,2.56652954828636,2.54805239706646,0,0,0.506719730950197,0,1.59857431606684,0.258937883647172,0,0.173485326766136,0.608930956624282,0.461230994512117,0.301445281105245,0,0.251333182659351,0.247194967734374,0.289198713839823,0,0.808834249737046,0,0,0,0.292780797011547,0.83778682725382,0,0.359445373517761,0,0.127070227073065,0.599162557619291,0,1.00523481690292,0.173824320192276,0.255715457330331,0.20778804455956,0.486723789203273,0.203678727700633,0.124406970610093,0,0,0.130120442962704,0.689706313300419,0.360124259610698,0.30140963567143,0.272145996605311,0.384341160854549,0.562210347358373,0,0.215567992932842,0,0.175951124163949,0.43839146485515,0,0,0.411564272815887,0.199034266818493,0.702213187313235,0.257347907114715,0.568326998791185,0.207125772535502,0.469052119962192,0.36012412292203,0,0.196764231747404,0.462801338662135,0.465067889500816,0.268273401399619,0,0.16455984991348,0.32833492815819,0.0810688095458557,0.438599962275997,0,0.268412837520744,0.210289948564127,0.617427674275707,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.201683524623343,0,0.380451252225118,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.648414149624083,0.398282546508734,0.569003702859245,0,0,0.610953983535943,0.387904974335251,0.350679099451593,0.442655759869801,0.590440591918409,0.156998727841375,0,0,0,0.196558995113203,0.449724224769707,0,0,0,0,1.13494658742525,0.549122826376163,0,0,0.312037673114561,0.505157755894224,0.179397413521912,0,0,0.189491411770485,0.488894929326078,0.169745085775188,0,0.335012514883631,0,0.585400943573396,0.157635144106191,0,0.159454768657487,0.491589944147214,0.345369963731791,0.289298117163023,0,0.54390568381871,0,0,0.321101179975584,0.703270119553219,0.327869890753351,0.504941854408746,0.631016438832513,0.390438744296638,0,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0.329940245945071,0,0.485561272309963,0,0,0.295301892880773,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0.720244376125241,1.03486947026204,0.214337035031592,0.177340233642274,0.356737635204141,0.987294123612726,1.2178597964584,0,0,0.220528398054962,0,0.322928853391811,0.180938774784468,0.119372344003136,0.164140899745061,0.291480836629851,0.741701208042039,0,0,0.185194527369712,0.565105371014073,0.27338845544205,0,0.509935289981566,0,0.414599921413271,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0.165306911450672,0.523511883968059,0.129614973291793,0,16.3470952218415,0.598066184175915,0.165458490457098,0.194451188344048,0.129159823477731,0.337912250981556,0.234714477291508,0.5208175393758,0.209718688851422,7.24752362478018,9.21696020025169,0,0.405450430580328,0.513554785824136,0.129920822977795,0,0.596044064343795,0,0.147689527174577,0,0.228620419965,0.100826185136841,0,0.192423683280659,0,0.226730383615211,0,0.269141569828427,0.335769232728157,0.386379188064381,0,0,0,0,0.564751842617067,0,0,1.03111909406213,1.37016503954128,0,0,1.35096360967266,0,0,0.830298780673413,0.399024873401031,0.341467211508268,0,0.419226325255965,0.551530525350042,0,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0.187283014939765,0,0.287177344778066,0.476293691283074,0.231768651889711,0,0.412085900803307,0,0.685738504770831,0.177475806159338,0.238436189947321,0,0.0941093804153306,0.169229215783353,0.548783918618318,0,0.407412341537585,0,0.237270036248348,0.0985044823755635,0.818462086339379,0.154936841185966,0,0.249810577937946,0,0.429742108096597,0.191288332068843,0.661774257358546,0 | ||
|short_description=p4@Pih1d1 | |||
}} | }} |
Latest revision as of 20:49, 26 September 2015
Short description: | p4@Pih1d1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Pih1d1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 35bp_to_NM_029406, uc009gtw.1_5end |
EntrezGene: | Pih1d1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.04e-11 | 23 |
neuroblast (sensu Vertebrata) | 8.04e-11 | 23 |
embryonic cell | 5.15e-10 | 70 |
electrically responsive cell | 1.31e-09 | 39 |
electrically active cell | 1.31e-09 | 39 |
smooth muscle cell | 1.11e-08 | 3 |
vascular associated smooth muscle cell | 1.11e-08 | 3 |
aortic smooth muscle cell | 1.11e-08 | 3 |
smooth muscle myoblast | 1.11e-08 | 3 |
neuron of the ventral spinal cord | 1.33e-08 | 3 |
somatic stem cell | 1.30e-07 | 91 |
multi fate stem cell | 1.30e-07 | 91 |
striatum neuron | 2.10e-07 | 3 |
neuron | 6.70e-07 | 33 |
neuronal stem cell | 6.70e-07 | 33 |
neuroblast | 6.70e-07 | 33 |
electrically signaling cell | 6.70e-07 | 33 |
stem cell | 7.36e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
basal ganglion | 9.08e-10 | 8 |
nuclear complex of neuraxis | 9.08e-10 | 8 |
aggregate regional part of brain | 9.08e-10 | 8 |
collection of basal ganglia | 9.08e-10 | 8 |
cerebral subcortex | 9.08e-10 | 8 |
gray matter | 2.73e-09 | 34 |
smooth muscle tissue | 1.11e-08 | 3 |
blood vessel smooth muscle | 1.11e-08 | 3 |
arterial system smooth muscle | 1.11e-08 | 3 |
artery smooth muscle tissue | 1.11e-08 | 3 |
aorta smooth muscle tissue | 1.11e-08 | 3 |
ventral horn of spinal cord | 1.33e-08 | 3 |
regional part of spinal cord | 1.53e-08 | 5 |
gray matter of spinal cord | 1.53e-08 | 5 |
regional part of nervous system | 6.72e-08 | 54 |
corpus striatum | 2.18e-07 | 5 |
striatum | 2.18e-07 | 5 |
ventral part of telencephalon | 2.18e-07 | 5 |
future corpus striatum | 2.18e-07 | 5 |
neural tube | 3.49e-07 | 52 |
neural rod | 3.49e-07 | 52 |
future spinal cord | 3.49e-07 | 52 |
neural keel | 3.49e-07 | 52 |
spinal cord | 4.08e-07 | 6 |
dorsal region element | 4.08e-07 | 6 |
dorsum | 4.08e-07 | 6 |
central nervous system | 7.23e-07 | 73 |