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{{f5samples
{{f5samples
|id=FF:11663-122F7
|DRA_sample_Accession=CAGE@SAMD00005001
|name=Melanocyte - dark, donor3
|accession_numbers=CAGE;DRX008337;DRR009209;DRZ000634;DRZ002019;DRZ011984;DRZ013369
|sample_id=11663
|rna_tube_id=122F7
|rna_box=122
|rna_position=F7
|sample_cell_lot=N/A
|sample_cell_catalog=N/A
|sample_company=Sciencell/3H
|rna_lot_number=4260
|rna_catalog_number=SC2205-3
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=skin
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=melanocyte
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
|rna_weight_ug=10
|rna_concentration=0.367
|sample_note=
|profile_hcage=CNhs12570,LSID917,release011,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000055,CL:0000063,CL:0000066,CL:0000075,CL:0000133,CL:0000144,CL:0000147,CL:0000148,CL:0000219,CL:0000220,CL:0000221,CL:0000255,CL:0000325,CL:0000333,CL:0000541,CL:0000548,CL:0000710,CL:0002077,CL:0002321,CL:0002371,CL:0002566
|ancestors_in_anatomy_facet=
|ancestors_in_anatomy_facet=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000075,CL:0000066,CL:0002371,CL:0000325,CL:0000147,CL:0000710,CL:0000255,CL:0002077,CL:0000148,CL:0002566
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000089
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
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OXC5,p2@HOXC6!0.65!3.49!HOXC5;;chr16:54320675..54320715,-!p1@IRX3!0.64!8.00!IRX3;;chr17:20492136..20492165,+!p1@MEIS3P2!0.64!5.65!MEIS3P2;;chr20:55204351..55204377,+!p1@TFAP2C!0.64!4.51!TFAP2C;;chr3:185826855..185826911,-!p1@ETV5!0.63!105.34!ETV5;;chr12:77459306..77459365,-!p1@E2F7!0.63!48.64!E2F7;;chr12:52430894..52430952,+!p3@NR4A1!0.63!6.86!NR4A1;;chr17:59477275..59477286,+!p3@TBX2!0.63!4.64!TBX2;;chr16:29819122..29819141,+!p34@MAZ!0.63!3.24!MAZ;;chr16:54320646..54320672,-!p2@IRX3!0.62!5.21!IRX3;;chr19:23299814..23299844,+!p1@ZNF730!0.62!4.06!ZNF730;;chr3:185826286..185826318,-!p5@ETV5!0.62!3.75!ETV5;;chr1:204042233..204042249,+!p1@SOX13!0.61!22.80!SOX13;;chr19:23433144..23433204,-!p1@ZNF724P!0.61!16.19!ZNF724P;;chr2:71127699..71127744,+!p1@VAX2!0.61!7.05!VAX2;;chr1:158985469..158985489,+!p7@IFI16!0.61!3.81!IFI16;;chr6:29648890..29648944,-!p1@ZFP57!0.61!3.05!ZFP57;;chr1:158979686..158979745,+!p1@IFI16!0.60!119.50!IFI16;;chr8:72756023..72756055,-!p6@MSC!0.59!3.75!MSC;;chr10:35484090..35484104,+!p6@CREM!0.59!2.92!CREM;;chr2:96012353..96012378,+!p4@KCNIP3!0.59!2.86!KCNIP3;;chr20:42295713..42295738,+!p2@MYBL2!0.58!20.00!MYBL2;;chr19:11959532..11959593,+!p1@ZNF439!0.58!12.76!ZNF439;;chr1:25256439..25256476,-!p3@RUNX3!0.58!2.79!RUNX3;;chr6:34204973..34204990,+!p4@HMGA1!0.57!44.64!HMGA1;;chr9:2158443..2158481,+!p2@SMARCA2!0.57!9.02!SMARCA2;;chr16:54320617..54320643,-!p3@IRX3!0.57!3.75!IRX3;;chr16:54320158..54320200,-!p5@IRX3!0.56!4.13!IRX3;;chr1:78050720..78050734,-!p9@ZZZ3!0.56!2.60!ZZZ3;;chr18:22932080..22932170,-!p1@ZNF521!0.55!13.14!ZNF521;;chr1:935398..935465,-!p2@HES4!0.55!6.03!HES4;;chr19:3572758..3572795,+!p7@HMG20B!0.55!2.54!HMG20B;;chr13:41635759..41635774,-!p21@ELF1!0.55!2.54!ELF1;;chr8:22550982..22550999,-!p1@EGR3!0.54!8.38!EGR3;;chr1:204042723..204042784,+!p3@SOX13!0.54!4.64!SOX13;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!0.54!2.48!PEG3;;chr20:61493117..61493187,-!p1@TCFL5!0.53!34.80!TCFL5;;chr12:2986275..2986363,-!p1@FOXM1!0.53!30.80!FOXM1;;chr5:124082322..124082364,-!p1@ZNF608!0.53!7.37!ZNF608;;chr12:12764995..12765017,+!p3@CREBL2!0.53!3.68!CREBL2;;chr1:38512457..38512474,-!p1@POU3F1!0.53!2.73!POU3F1;;chr1:158985536..158985545,+!p18@IFI16!0.53!2.41!IFI16;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.52!13.27!TAL1;;chr7:14029312..14029325,-!p4@ETV1!0.52!3.05!ETV1;;chr11:125034586..125034604,+!p3@PKNOX2!0.52!2.35!PKNOX2;;chr12:26277798..26277809,-!p5@BHLHE41!0.52!2.35!BHLHE41;;chr19:35759824..35759891,+!p1@USF2!0.51!90.55!USF2;;chr4:103422232..103422241,+!p6@NFKB1!0.51!2.92!NFKB1;;chr6:15401104..15401166,+!p5@JARID2!0.51!2.22!JARID2;;chr8:72756194..72756208,-!p9@MSC!0.51!2.22!MSC;;chr12:54380036..54380091,+!p4@HOXC10!0.51!2.22!HOXC10;;chr12:54394309..54394336,+!p2@HOXC9!0.51!2.22!HOXC9;;chr12:3068466..3068495,+!p3@TEAD4!0.50!5.59!TEAD4;;chr9:99180662..99180690,-!p2@ZNF367!0.50!3.30!ZNF367;;chr7:27205136..27205164,-!p1@HOXA9!0.50!2.16!HOXA9;;chr1:158985553..158985574,+!p14@IFI16!0.50!2.16!IFI16;;chr8:128748308..128748324,+!p2@MYC!0.49!77.15!MYC;;chr8:67525473..67525518,-!p1@MYBL1!0.49!5.84!MYBL1;;chr9:99180597..99180614,-!p3@ZNF367!0.49!2.48!ZNF367;;chr17:46806067..46806097,-!p1@HOXB13!0.49!2.10!HOXB13;;chr2:145277792..145277808,-!p15@ZEB2!0.49!2.10!ZEB2;;chr7:28220198..28220269,-!p2@JAZF1!0.48!23.88!JAZF1;;chr17:59477197..59477212,+!p2@TBX2!0.48!4.06!TBX2;;chr2:166326200..166326216,+!p1@CSRNP3!0.48!3.30!CSRNP3;;chr16:54320101..54320125,-!p4@IRX3!0.48!3.24!IRX3;;chr17:46682321..46682362,-!p1@HOXB6!0.48!2.03!HOXB6;;chr7:155250249..155250278,+!p@chr7:155250249..155250278,+!0.48!2.03!EN2;;chrY:21906761..21906810,-!p2@KDM5D!0.48!2.03!KDM5D;;chr19:42788611..42788634,+!p2@CIC!0.47!3.56!CIC;;chr6:10415645..10415675,-!p19@TFAP2A!0.47!1.97!TFAP2A;;chr19:3574468..3574478,+!p19@HMG20B!0.47!1.97!HMG20B;;chr4:57547454..57547469,-!p1@HOPX!0.47!1.97!HOPX;;chr16:29819403..29819442,+!p5@MAZ!0.46!21.21!MAZ;;chr8:37553261..37553282,+!p2@ZNF703!0.46!19.62!ZNF703;;chr16:67063211..67063240,+!p2@CBFB!0.46!11.94!CBFB;;chr19:11849700..11849803,-!p1@ZNF823!0.46!11.94!ZNF823;;chr5:88179017..88179046,-!p2@MEF2C!0.46!9.91!MEF2C;;chr19:42788636..42788660,+!p1@CIC!0.46!3.68!CIC;;chr19:58341656..58341694,+!p5@ZNF587!0.46!2.41!ZNF587;;chr11:16627528..16627550,-!p7@SOX6!0.46!1.90!SOX6;;chr19:19569270..19569277,+!p32@GATAD2A!0.46!1.90!GATAD2A;;chr1:45805872..45805900,+!p2@TOE1!0.45!5.59!TOE1;;chr5:139487608..139487663,+!p3@PURA!0.45!4.83!PURA;;chr1:226595648..226595659,-!p3@PARP1!0.45!3.62!PARP1;;chr15:57511609..57511651,+!p2@TCF12!0.45!3.56!TCF12;;chr20:42295745..42295765,+!p1@MYBL2!0.44!40.58!MYBL2;;chr19:44037546..44037594,+!p1@ZNF575!0.44!4.51!ZNF575;;chr17:42295897..42295953,-!p10@UBTF!0.44!2.60!UBTF;;chr12:24715376..24715432,-!p1@SOX5!0.44!2.41!SOX5;;chr3:126076242..126076257,-!p1@KLF15!0.44!2.41!KLF15;;chr12:54379477..54379498,+!p5@HOXC5!0.44!1.78!HOXC5;;chr12:54380404..54380433,+!p3@HOXC10!0.44!1.78!HOXC10;;chr17:42295777..42295816,-!p7@UBTF!0.43!2.22!UBTF;;chr9:102584329..102584341,+!p6@NR4A3!0.43!1.71!NR4A3;;chr16:67063036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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000066;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000147;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000148;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000221;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000710;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002077
|ffid_belonging_in_development=CL:0000133,CL:0000221
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Melanocyte%2520-%2520dark%252c%2520donor3.CNhs12570.11663-122F7.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Melanocyte%2520-%2520dark%252c%2520donor3.CNhs12570.11663-122F7.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Melanocyte%2520-%2520dark%252c%2520donor3.CNhs12570.11663-122F7.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Melanocyte%2520-%2520dark%252c%2520donor3.CNhs12570.11663-122F7.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Melanocyte%2520-%2520dark%252c%2520donor3.CNhs12570.11663-122F7.hg38.nobarcode.ctss.bed.gz
|id=FF:11663-122F7
|is_a=EFO:0002091;;FF:0000089
|is_obsolete=
|library_id=CNhs12570
|library_id_phase_based=2:CNhs12570
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11663
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11663
|name=Melanocyte - dark, donor3
|namespace=FANTOM5
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs12570,LSID917,release011,COMPLETED
|profile_rnaseq=
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|rna_box=122
|rna_catalog_number=SC2205-3
|rna_concentration=0.367
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
|rna_lot_number=4260
|rna_od260/230=
|rna_od260/280=
|rna_position=F7
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=122F7
|rna_weight_ug=10
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_lot=N/A
|sample_cell_type=melanocyte
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Sciencell/3H
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.05528543447261e-282!GO:0043226;organelle;5.27184787274432e-234!GO:0043229;intracellular organelle;1.40396120586747e-233!GO:0043231;intracellular membrane-bound organelle;1.31234410769252e-232!GO:0043227;membrane-bound organelle;1.61366172073335e-232!GO:0005737;cytoplasm;2.59657990177243e-212!GO:0044422;organelle part;7.9025159092028e-178!GO:0044446;intracellular organelle part;2.61429540255303e-176!GO:0044444;cytoplasmic part;7.10537768896996e-158!GO:0032991;macromolecular complex;2.96115391933148e-107!GO:0044237;cellular metabolic process;1.14125910963433e-102!GO:0044238;primary metabolic process;2.16350099892753e-99!GO:0043170;macromolecule metabolic process;7.77996372915951e-89!GO:0005634;nucleus;2.13064634309506e-88!GO:0030529;ribonucleoprotein complex;3.18431358133171e-85!GO:0044428;nuclear part;4.72020754656052e-79!GO:0005739;mitochondrion;9.55240988325584e-78!GO:0043233;organelle lumen;5.26273521446452e-77!GO:0031974;membrane-enclosed lumen;5.26273521446452e-77!GO:0003723;RNA binding;3.43611129418218e-67!GO:0031090;organelle membrane;1.00808247294106e-64!GO:0005515;protein binding;1.73603939633763e-64!GO:0043234;protein complex;1.26385021493798e-56!GO:0044429;mitochondrial part;1.06284619819122e-53!GO:0043283;biopolymer metabolic process;2.31197416484009e-53!GO:0016043;cellular component organization and biogenesis;1.82398027170524e-51!GO:0015031;protein transport;1.01681196393547e-50!GO:0033036;macromolecule localization;1.48927402926796e-50!GO:0005840;ribosome;2.99235998588395e-50!GO:0031967;organelle envelope;3.89199537008697e-50!GO:0031975;envelope;8.83857951197383e-50!GO:0006412;translation;5.23757201354117e-48!GO:0006396;RNA processing;5.70791628834537e-48!GO:0019538;protein metabolic process;8.74988438259156e-48!GO:0008104;protein localization;9.07623693678588e-47!GO:0045184;establishment of protein localization;1.66019506940658e-46!GO:0009058;biosynthetic process;4.03304853579535e-45!GO:0031981;nuclear lumen;1.45796332865853e-44!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.0188441350432e-44!GO:0006996;organelle organization and biogenesis;7.04765684807308e-44!GO:0003735;structural constituent of ribosome;7.39787016842321e-44!GO:0006259;DNA metabolic process;9.78378417230914e-44!GO:0044260;cellular macromolecule metabolic process;1.6080766931605e-43!GO:0044267;cellular protein metabolic process;5.03624364237071e-43!GO:0043228;non-membrane-bound organelle;1.36160536256864e-41!GO:0043232;intracellular non-membrane-bound organelle;1.36160536256864e-41!GO:0009059;macromolecule biosynthetic process;2.2844007770772e-39!GO:0044249;cellular biosynthetic process;2.668665379423e-39!GO:0046907;intracellular transport;3.65774484605667e-38!GO:0005829;cytosol;3.78892153669877e-38!GO:0016071;mRNA metabolic process;5.35747952379321e-38!GO:0033279;ribosomal subunit;5.52030155440364e-38!GO:0010467;gene expression;1.52139233832065e-37!GO:0065003;macromolecular complex assembly;7.12041010101553e-36!GO:0048770;pigment granule;7.30419566973135e-36!GO:0042470;melanosome;7.30419566973135e-36!GO:0008380;RNA splicing;1.58973044800043e-35!GO:0005740;mitochondrial envelope;1.58973044800043e-35!GO:0031966;mitochondrial membrane;3.69385694219833e-33!GO:0006397;mRNA processing;7.51613609329506e-33!GO:0022613;ribonucleoprotein complex biogenesis and assembly;8.10998999294338e-33!GO:0019866;organelle inner membrane;1.5497455836115e-32!GO:0007049;cell cycle;2.01508314499342e-32!GO:0022607;cellular component assembly;6.87283327486209e-32!GO:0006886;intracellular protein transport;2.36617882134059e-31!GO:0005743;mitochondrial inner membrane;2.29062768315176e-30!GO:0000166;nucleotide binding;2.38199697517763e-28!GO:0012505;endomembrane system;2.0255095495083e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.25855920769451e-27!GO:0016462;pyrophosphatase activity;3.80054588063365e-27!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.39529189290987e-27!GO:0016817;hydrolase activity, acting on acid anhydrides;4.90102317164895e-27!GO:0005654;nucleoplasm;8.36656818025752e-27!GO:0051649;establishment of cellular localization;1.23969940789529e-26!GO:0003676;nucleic acid binding;1.73062539482977e-26!GO:0005694;chromosome;2.25923887031761e-26!GO:0051641;cellular localization;2.7063888379974e-26!GO:0006974;response to DNA damage stimulus;3.49072204939295e-26!GO:0017111;nucleoside-triphosphatase activity;7.24198249125808e-26!GO:0006119;oxidative phosphorylation;1.78553851587858e-25!GO:0005681;spliceosome;1.78553851587858e-25!GO:0044427;chromosomal part;3.38274051236091e-24!GO:0022402;cell cycle process;1.00328728854273e-23!GO:0044445;cytosolic part;3.68746482369697e-23!GO:0000278;mitotic cell cycle;1.16397277334502e-22!GO:0031980;mitochondrial lumen;1.47957883575934e-22!GO:0005759;mitochondrial matrix;1.47957883575934e-22!GO:0006281;DNA repair;1.47957883575934e-22!GO:0044455;mitochondrial membrane part;7.22886917737535e-22!GO:0032553;ribonucleotide binding;1.39754587321598e-21!GO:0032555;purine ribonucleotide binding;1.39754587321598e-21!GO:0044451;nucleoplasm part;2.99406052055366e-21!GO:0017076;purine nucleotide binding;3.41729360076881e-21!GO:0006457;protein folding;3.75285247844883e-20!GO:0051276;chromosome organization and biogenesis;3.82869037620666e-20!GO:0022618;protein-RNA complex assembly;4.33769876914612e-20!GO:0015935;small ribosomal subunit;4.64419275321571e-20!GO:0022403;cell cycle phase;1.04879266143221e-19!GO:0051301;cell division;1.90391662390255e-19!GO:0016874;ligase activity;1.98993312376313e-19!GO:0005783;endoplasmic reticulum;5.30448682462005e-19!GO:0015934;large ribosomal subunit;6.57799798976053e-19!GO:0006260;DNA replication;1.00584355962469e-18!GO:0006512;ubiquitin cycle;2.29525288093934e-18!GO:0000087;M phase of mitotic cell cycle;2.29525288093934e-18!GO:0005524;ATP binding;3.41245006219247e-18!GO:0051186;cofactor metabolic process;3.44048672720304e-18!GO:0007067;mitosis;5.02125697436867e-18!GO:0005746;mitochondrial respiratory chain;5.86236146509149e-18!GO:0009719;response to endogenous stimulus;1.04636572659241e-17!GO:0032559;adenyl ribonucleotide binding;1.10026530810371e-17!GO:0044265;cellular macromolecule catabolic process;1.59115038418703e-17!GO:0005730;nucleolus;2.18706384206257e-17!GO:0043285;biopolymer catabolic process;2.23101573960038e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.92227983343507e-17!GO:0030554;adenyl nucleotide binding;4.04949120083816e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;4.87878997338565e-17!GO:0000279;M phase;4.88930037500741e-17!GO:0006511;ubiquitin-dependent protein catabolic process;9.30331324705934e-17!GO:0019941;modification-dependent protein catabolic process;9.57041877677201e-17!GO:0043632;modification-dependent macromolecule catabolic process;9.57041877677201e-17!GO:0016070;RNA metabolic process;1.03159495655393e-16!GO:0009057;macromolecule catabolic process;1.43719765430578e-16!GO:0044432;endoplasmic reticulum part;1.48361390003843e-16!GO:0044257;cellular protein catabolic process;1.49958578017308e-16!GO:0000502;proteasome complex (sensu Eukaryota);3.05141292975243e-16!GO:0005794;Golgi apparatus;3.86492328764614e-16!GO:0050136;NADH dehydrogenase (quinone) activity;4.91451812914012e-16!GO:0003954;NADH dehydrogenase activity;4.91451812914012e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.91451812914012e-16!GO:0030163;protein catabolic process;6.22093325321044e-16!GO:0044248;cellular catabolic process;1.0013659054491e-15!GO:0008135;translation factor activity, nucleic acid binding;1.3152367632808e-15!GO:0006325;establishment and/or maintenance of chromatin architecture;1.34301043069717e-15!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.98088718680132e-15!GO:0005635;nuclear envelope;2.20825871734444e-15!GO:0008134;transcription factor binding;3.73452550931502e-15!GO:0042623;ATPase activity, coupled;5.05885215241926e-15!GO:0006323;DNA packaging;6.19394244703342e-15!GO:0005761;mitochondrial ribosome;8.04809672920551e-15!GO:0000313;organellar ribosome;8.04809672920551e-15!GO:0016887;ATPase activity;8.13786871747629e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);9.17781625478426e-15!GO:0043412;biopolymer modification;1.66880253103736e-14!GO:0042775;organelle ATP synthesis coupled electron transport;1.67863186351348e-14!GO:0042773;ATP synthesis coupled electron transport;1.67863186351348e-14!GO:0006732;coenzyme metabolic process;2.79256171149961e-14!GO:0030964;NADH dehydrogenase complex (quinone);3.37349275293971e-14!GO:0045271;respiratory chain complex I;3.37349275293971e-14!GO:0005747;mitochondrial respiratory chain complex I;3.37349275293971e-14!GO:0006605;protein targeting;3.44705566065629e-14!GO:0031965;nuclear membrane;3.77508740798249e-14!GO:0051082;unfolded protein binding;4.60573945979673e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;8.79087993433777e-14!GO:0042254;ribosome biogenesis and assembly;1.17402804280483e-13!GO:0006333;chromatin assembly or disassembly;1.50921765729374e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.70371271544023e-13!GO:0006413;translational initiation;2.23498492146605e-13!GO:0044453;nuclear membrane part;3.2977500078466e-13!GO:0000785;chromatin;3.84818340871313e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;4.72049538449052e-13!GO:0000375;RNA splicing, via transesterification reactions;4.72049538449052e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.72049538449052e-13!GO:0006464;protein modification process;8.08920564010769e-13!GO:0065004;protein-DNA complex assembly;1.07716020441396e-12!GO:0003743;translation initiation factor activity;1.3100239701998e-12!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.45580120355317e-12!GO:0031988;membrane-bound vesicle;1.68736607689344e-12!GO:0009259;ribonucleotide metabolic process;1.90438700018869e-12!GO:0005789;endoplasmic reticulum membrane;2.3389730776932e-12!GO:0015630;microtubule cytoskeleton;2.5223340219403e-12!GO:0016023;cytoplasmic membrane-bound vesicle;2.7945775380358e-12!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.07215434560751e-12!GO:0006163;purine nucleotide metabolic process;3.07215434560751e-12!GO:0031982;vesicle;4.2332271043813e-12!GO:0048193;Golgi vesicle transport;4.48837968351259e-12!GO:0008565;protein transporter activity;5.64655859407569e-12!GO:0031410;cytoplasmic vesicle;8.07492150075672e-12!GO:0051726;regulation of cell cycle;9.12928612322444e-12!GO:0016192;vesicle-mediated transport;1.17112661294519e-11!GO:0016604;nuclear body;1.37399376907587e-11!GO:0009150;purine ribonucleotide metabolic process;1.63629781725868e-11!GO:0004386;helicase activity;2.12135510042834e-11!GO:0000074;regulation of progression through cell cycle;2.26939874689256e-11!GO:0006334;nucleosome assembly;2.27312909335402e-11!GO:0031497;chromatin assembly;5.068127624468e-11!GO:0005643;nuclear pore;5.08310123758768e-11!GO:0006164;purine nucleotide biosynthetic process;5.32190061875827e-11!GO:0009199;ribonucleoside triphosphate metabolic process;5.50135306997406e-11!GO:0006446;regulation of translational initiation;5.75784612937409e-11!GO:0009141;nucleoside triphosphate metabolic process;5.86918921822519e-11!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;7.3697464126837e-11!GO:0005768;endosome;9.76444075314583e-11!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.08496892401082e-10!GO:0009144;purine nucleoside triphosphate metabolic process;1.08496892401082e-10!GO:0009260;ribonucleotide biosynthetic process;1.14759981043007e-10!GO:0006399;tRNA metabolic process;1.19869592219889e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.79293904103199e-10!GO:0008639;small protein conjugating enzyme activity;2.17365240630644e-10!GO:0005773;vacuole;2.71623100032119e-10!GO:0009152;purine ribonucleotide biosynthetic process;2.80057156105948e-10!GO:0043687;post-translational protein modification;3.09249392404967e-10!GO:0015986;ATP synthesis coupled proton transport;3.22112267764522e-10!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.22112267764522e-10!GO:0019787;small conjugating protein ligase activity;3.89829047864164e-10!GO:0046034;ATP metabolic process;4.00957008065876e-10!GO:0016787;hydrolase activity;4.03060194472486e-10!GO:0004842;ubiquitin-protein ligase activity;5.25984775220415e-10!GO:0065002;intracellular protein transport across a membrane;6.30099722563001e-10!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;6.80402074340558e-10!GO:0050657;nucleic acid transport;6.85504423463469e-10!GO:0051236;establishment of RNA localization;6.85504423463469e-10!GO:0050658;RNA transport;6.85504423463469e-10!GO:0009056;catabolic process;7.32458282776493e-10!GO:0051188;cofactor biosynthetic process;7.32458282776493e-10!GO:0045333;cellular respiration;8.10941203970086e-10!GO:0009060;aerobic respiration;8.29700895534967e-10!GO:0006403;RNA localization;8.49461271397004e-10!GO:0016881;acid-amino acid ligase activity;1.28846034934892e-09!GO:0009142;nucleoside triphosphate biosynthetic process;1.42210654640385e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.42210654640385e-09!GO:0009055;electron carrier activity;2.05481004656947e-09!GO:0006364;rRNA processing;2.17208018252665e-09!GO:0016469;proton-transporting two-sector ATPase complex;2.33929091953277e-09!GO:0003697;single-stranded DNA binding;2.37199284803728e-09!GO:0006261;DNA-dependent DNA replication;2.70204678492946e-09!GO:0003712;transcription cofactor activity;2.72540661009849e-09!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.7999646403307e-09!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.7999646403307e-09!GO:0008026;ATP-dependent helicase activity;3.08648734888191e-09!GO:0043566;structure-specific DNA binding;3.23316724520382e-09!GO:0000775;chromosome, pericentric region;3.7038390218111e-09!GO:0016607;nuclear speck;4.13009780633468e-09!GO:0019829;cation-transporting ATPase activity;4.13135812366701e-09!GO:0006461;protein complex assembly;5.03692573579093e-09!GO:0046930;pore complex;5.49101045066592e-09!GO:0006913;nucleocytoplasmic transport;5.5442658232526e-09!GO:0000323;lytic vacuole;5.63666972375863e-09!GO:0005764;lysosome;5.63666972375863e-09!GO:0015078;hydrogen ion transmembrane transporter activity;5.94071706759794e-09!GO:0016740;transferase activity;6.28629232285793e-09!GO:0009117;nucleotide metabolic process;6.41209775343375e-09!GO:0016072;rRNA metabolic process;6.78286791240096e-09!GO:0006754;ATP biosynthetic process;9.20196773179612e-09!GO:0006753;nucleoside phosphate metabolic process;9.20196773179612e-09!GO:0006099;tricarboxylic acid cycle;1.02498767037486e-08!GO:0046356;acetyl-CoA catabolic process;1.02498767037486e-08!GO:0051169;nuclear transport;1.10326603393269e-08!GO:0008654;phospholipid biosynthetic process;1.2936791952588e-08!GO:0006084;acetyl-CoA metabolic process;1.97303764015175e-08!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.20832728857402e-08!GO:0004812;aminoacyl-tRNA ligase activity;2.20832728857402e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.20832728857402e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.57863070186951e-08!GO:0003924;GTPase activity;2.6291082836751e-08!GO:0043038;amino acid activation;3.01618696353572e-08!GO:0006418;tRNA aminoacylation for protein translation;3.01618696353572e-08!GO:0043039;tRNA aminoacylation;3.01618696353572e-08!GO:0005819;spindle;3.17934386428313e-08!GO:0044431;Golgi apparatus part;4.0230479978425e-08!GO:0007005;mitochondrion organization and biogenesis;4.13537391585922e-08!GO:0016568;chromatin modification;4.14274932912747e-08!GO:0051028;mRNA transport;4.34344251554955e-08!GO:0009109;coenzyme catabolic process;6.25861717528311e-08!GO:0005793;ER-Golgi intermediate compartment;7.50344991776615e-08!GO:0009108;coenzyme biosynthetic process;8.06772222051516e-08!GO:0006752;group transfer coenzyme metabolic process;8.07929097869226e-08!GO:0005770;late endosome;1.03304491871304e-07!GO:0051187;cofactor catabolic process;1.11433266598533e-07!GO:0016779;nucleotidyltransferase activity;1.1611477736325e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.6883469743579e-07!GO:0005657;replication fork;1.78074115074561e-07!GO:0044440;endosomal part;1.86984280772833e-07!GO:0010008;endosome membrane;1.86984280772833e-07!GO:0048475;coated membrane;3.21647011407902e-07!GO:0030117;membrane coat;3.21647011407902e-07!GO:0005813;centrosome;3.55046079458393e-07!GO:0005815;microtubule organizing center;3.77586455233237e-07!GO:0012501;programmed cell death;4.15928158514338e-07!GO:0006915;apoptosis;4.53205021809813e-07!GO:0032446;protein modification by small protein conjugation;4.55231942501947e-07!GO:0005798;Golgi-associated vesicle;4.63132059713174e-07!GO:0030120;vesicle coat;5.19467651323085e-07!GO:0030662;coated vesicle membrane;5.19467651323085e-07!GO:0008094;DNA-dependent ATPase activity;5.64474504228408e-07!GO:0046474;glycerophospholipid biosynthetic process;5.68987940371105e-07!GO:0000786;nucleosome;5.81695906372839e-07!GO:0016567;protein ubiquitination;7.03064945034836e-07!GO:0045259;proton-transporting ATP synthase complex;8.52758191004248e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;9.88542753809692e-07!GO:0006888;ER to Golgi vesicle-mediated transport;9.88542753809692e-07!GO:0005525;GTP binding;1.04326462007288e-06!GO:0000245;spliceosome assembly;1.05038237184869e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.41375191460499e-06!GO:0016853;isomerase activity;1.46689428269345e-06!GO:0017038;protein import;1.70951751658583e-06!GO:0007051;spindle organization and biogenesis;1.72594458702401e-06!GO:0000075;cell cycle checkpoint;1.87766213331243e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.91487129216567e-06!GO:0006366;transcription from RNA polymerase II promoter;2.06293929078136e-06!GO:0043623;cellular protein complex assembly;2.10620616669714e-06!GO:0051329;interphase of mitotic cell cycle;2.26447805259899e-06!GO:0046467;membrane lipid biosynthetic process;2.93025139290605e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.48111220009907e-06!GO:0051325;interphase;3.52014937525842e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.60731038875149e-06!GO:0051246;regulation of protein metabolic process;3.82945001428436e-06!GO:0016491;oxidoreductase activity;4.28752667016881e-06!GO:0008219;cell death;4.48722693224868e-06!GO:0016265;death;4.48722693224868e-06!GO:0006650;glycerophospholipid metabolic process;4.59098426873986e-06!GO:0006302;double-strand break repair;4.86317531632021e-06!GO:0000151;ubiquitin ligase complex;6.12713866879167e-06!GO:0005667;transcription factor complex;6.8366633620945e-06!GO:0004298;threonine endopeptidase activity;6.8366633620945e-06!GO:0006613;cotranslational protein targeting to membrane;6.8366633620945e-06!GO:0000139;Golgi membrane;6.8366633620945e-06!GO:0006793;phosphorus metabolic process;6.9973019611916e-06!GO:0006796;phosphate metabolic process;6.9973019611916e-06!GO:0005769;early endosome;7.08300823365444e-06!GO:0030659;cytoplasmic vesicle membrane;7.21185752975974e-06!GO:0005788;endoplasmic reticulum lumen;8.92542486785073e-06!GO:0031252;leading edge;9.30436196842068e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;9.61337513656316e-06!GO:0003899;DNA-directed RNA polymerase activity;1.06178873635637e-05!GO:0046148;pigment biosynthetic process;1.16024813314907e-05!GO:0046489;phosphoinositide biosynthetic process;1.17833387341648e-05!GO:0042440;pigment metabolic process;1.21692765818509e-05!GO:0015980;energy derivation by oxidation of organic compounds;1.24355376375838e-05!GO:0015631;tubulin binding;1.2504733860395e-05!GO:0016859;cis-trans isomerase activity;1.25902455770462e-05!GO:0006310;DNA recombination;1.39765832207179e-05!GO:0006916;anti-apoptosis;1.54426599203806e-05!GO:0032561;guanyl ribonucleotide binding;1.56545791953767e-05!GO:0019001;guanyl nucleotide binding;1.56545791953767e-05!GO:0007059;chromosome segregation;1.92018877227043e-05!GO:0006643;membrane lipid metabolic process;2.08609057804596e-05!GO:0048471;perinuclear region of cytoplasm;2.22881245288923e-05!GO:0012506;vesicle membrane;2.31444120674228e-05!GO:0006612;protein targeting to membrane;2.41875515875019e-05!GO:0016363;nuclear matrix;2.5552823491217e-05!GO:0044433;cytoplasmic vesicle part;2.62646217477473e-05!GO:0000776;kinetochore;2.82878985739284e-05!GO:0005874;microtubule;2.89841383799332e-05!GO:0048066;pigmentation during development;3.33644744087113e-05!GO:0003690;double-stranded DNA binding;3.33644744087113e-05!GO:0005762;mitochondrial large ribosomal subunit;3.45118447115905e-05!GO:0000315;organellar large ribosomal subunit;3.45118447115905e-05!GO:0003713;transcription coactivator activity;3.83346654901193e-05!GO:0003724;RNA helicase activity;3.89324154540577e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;4.10237003520131e-05!GO:0015399;primary active transmembrane transporter activity;4.10237003520131e-05!GO:0003682;chromatin binding;4.93035415119104e-05!GO:0051427;hormone receptor binding;4.9488532562553e-05!GO:0016310;phosphorylation;5.1917979850871e-05!GO:0007010;cytoskeleton organization and biogenesis;5.41564242604207e-05!GO:0050794;regulation of cellular process;5.45996145553577e-05!GO:0006091;generation of precursor metabolites and energy;6.11063663007205e-05!GO:0051168;nuclear export;6.16590189493587e-05!GO:0006383;transcription from RNA polymerase III promoter;7.82077772219432e-05!GO:0048523;negative regulation of cellular process;8.03742493975731e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;8.75980367189922e-05!GO:0043021;ribonucleoprotein binding;9.00369917366986e-05!GO:0009165;nucleotide biosynthetic process;9.16671532145987e-05!GO:0006818;hydrogen transport;9.49174701414997e-05!GO:0000314;organellar small ribosomal subunit;9.5605017522078e-05!GO:0005763;mitochondrial small ribosomal subunit;9.5605017522078e-05!GO:0019899;enzyme binding;9.93793271171426e-05!GO:0030384;phosphoinositide metabolic process;9.99480609461126e-05!GO:0035257;nuclear hormone receptor binding;0.000103057851493207!GO:0045786;negative regulation of progression through cell cycle;0.000113831655188121!GO:0031968;organelle outer membrane;0.000114445133400792!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.000117890105092499!GO:0008610;lipid biosynthetic process;0.000122139223432957!GO:0015992;proton transport;0.00012594324781943!GO:0019867;outer membrane;0.000144278858386986!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000150623939092503!GO:0019843;rRNA binding;0.000153293820557455!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000172374095099152!GO:0016126;sterol biosynthetic process;0.000172821103952305!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000179375370436614!GO:0031072;heat shock protein binding;0.000180279271851749!GO:0016563;transcription activator activity;0.000186592873793256!GO:0030133;transport vesicle;0.000202229186197074!GO:0003684;damaged DNA binding;0.000210009975150313!GO:0051052;regulation of DNA metabolic process;0.000215769876062695!GO:0030867;rough endoplasmic reticulum membrane;0.000215769876062695!GO:0031324;negative regulation of cellular metabolic process;0.000225178118193119!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000230940556603596!GO:0007088;regulation of mitosis;0.000234255097629539!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000234255097629539!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000245345590468275!GO:0000059;protein import into nucleus, docking;0.00025071485981605!GO:0005741;mitochondrial outer membrane;0.000281293699768042!GO:0016564;transcription repressor activity;0.000286299015699974!GO:0005885;Arp2/3 protein complex;0.00029072293266849!GO:0031902;late endosome membrane;0.0002973974648131!GO:0007017;microtubule-based process;0.00030270465656255!GO:0051170;nuclear import;0.000304465480296019!GO:0006626;protein targeting to mitochondrion;0.000324941834594098!GO:0005774;vacuolar membrane;0.000335386660118493!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000338371490965023!GO:0045454;cell redox homeostasis;0.000383082491199578!GO:0043069;negative regulation of programmed cell death;0.000389357550257204!GO:0042981;regulation of apoptosis;0.000417385824041674!GO:0003678;DNA helicase activity;0.000434802181946466!GO:0043681;protein import into mitochondrion;0.000439484016666381!GO:0043066;negative regulation of apoptosis;0.00045262091368897!GO:0006506;GPI anchor biosynthetic process;0.000478142427021954!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000480869309820904!GO:0006839;mitochondrial transport;0.000483139354717613!GO:0007052;mitotic spindle organization and biogenesis;0.000489851012351974!GO:0004527;exonuclease activity;0.000505626080046129!GO:0005905;coated pit;0.000508369334767425!GO:0008186;RNA-dependent ATPase activity;0.000511359051634929!GO:0043067;regulation of programmed cell death;0.000517124593405009!GO:0006644;phospholipid metabolic process;0.0005176896128333!GO:0003714;transcription corepressor activity;0.000539979030914345!GO:0044262;cellular carbohydrate metabolic process;0.000545928086878582!GO:0046519;sphingoid metabolic process;0.000545928086878582!GO:0051789;response to protein stimulus;0.000546126171257816!GO:0006986;response to unfolded protein;0.000546126171257816!GO:0042802;identical protein binding;0.000547868428212586!GO:0009892;negative regulation of metabolic process;0.00056392709166331!GO:0004576;oligosaccharyl transferase activity;0.000564890578017355!GO:0004518;nuclease activity;0.000616683178447088!GO:0043492;ATPase activity, coupled to movement of substances;0.000629187973247645!GO:0007093;mitotic cell cycle checkpoint;0.00063942515598055!GO:0006672;ceramide metabolic process;0.000642210723650149!GO:0006606;protein import into nucleus;0.000648683920305168!GO:0006505;GPI anchor metabolic process;0.000649390968183087!GO:0008250;oligosaccharyl transferase complex;0.000649634739988624!GO:0000910;cytokinesis;0.000683354058142393!GO:0042158;lipoprotein biosynthetic process;0.000683758361846107!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000696001118920529!GO:0033162;melanosome membrane;0.000696001118920529!GO:0045009;chitosome;0.000696001118920529!GO:0005791;rough endoplasmic reticulum;0.000733593557920721!GO:0048519;negative regulation of biological process;0.000735010113874539!GO:0044452;nucleolar part;0.000737899911222838!GO:0003729;mRNA binding;0.00076367921256013!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000774927862714108!GO:0008033;tRNA processing;0.000804584366750523!GO:0030880;RNA polymerase complex;0.000808428937265414!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000820117049103157!GO:0019748;secondary metabolic process;0.000841453467426563!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000846847034370201!GO:0006497;protein amino acid lipidation;0.000899141951151473!GO:0051920;peroxiredoxin activity;0.000908611296436029!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000935849877982237!GO:0030118;clathrin coat;0.000995529227737031!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00103400495902223!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00103400495902223!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00103400495902223!GO:0032508;DNA duplex unwinding;0.00103694026495687!GO:0032392;DNA geometric change;0.00103694026495687!GO:0005048;signal sequence binding;0.00104798555901515!GO:0006695;cholesterol biosynthetic process;0.00108527046534625!GO:0048487;beta-tubulin binding;0.00116985496636312!GO:0007006;mitochondrial membrane organization and biogenesis;0.00117620953482478!GO:0035258;steroid hormone receptor binding;0.00118356013410738!GO:0044437;vacuolar part;0.00120073936299313!GO:0004004;ATP-dependent RNA helicase activity;0.00127082938278656!GO:0005876;spindle microtubule;0.00132358923649233!GO:0007034;vacuolar transport;0.00141771185641197!GO:0007264;small GTPase mediated signal transduction;0.00142892212316764!GO:0006268;DNA unwinding during replication;0.00144378233231311!GO:0043596;nuclear replication fork;0.00148056580977284!GO:0030658;transport vesicle membrane;0.00149839411720167!GO:0048500;signal recognition particle;0.00164811162440654!GO:0033116;ER-Golgi intermediate compartment membrane;0.00166484500734048!GO:0051252;regulation of RNA metabolic process;0.00170636107577096!GO:0030027;lamellipodium;0.00170636107577096!GO:0006402;mRNA catabolic process;0.00175546135404624!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0017833542813775!GO:0000428;DNA-directed RNA polymerase complex;0.0017833542813775!GO:0022890;inorganic cation transmembrane transporter activity;0.00181683316073193!GO:0008092;cytoskeletal protein binding;0.00185818847350839!GO:0006270;DNA replication initiation;0.00185923295211281!GO:0007040;lysosome organization and biogenesis;0.00196172109144282!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00200920328648286!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00200920328648286!GO:0043284;biopolymer biosynthetic process;0.00202621918744913!GO:0042393;histone binding;0.0020585506534525!GO:0050662;coenzyme binding;0.00210151113497677!GO:0000228;nuclear chromosome;0.00225519140115594!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00229640765770272!GO:0007033;vacuole organization and biogenesis;0.00238352486331512!GO:0065009;regulation of a molecular function;0.00238506373270397!GO:0016197;endosome transport;0.00238714000239071!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00248463653263589!GO:0019752;carboxylic acid metabolic process;0.00250228034423652!GO:0006414;translational elongation;0.00252785792618633!GO:0006611;protein export from nucleus;0.00256632132530274!GO:0030521;androgen receptor signaling pathway;0.00258693579254128!GO:0018196;peptidyl-asparagine modification;0.00258879307990928!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00258879307990928!GO:0008022;protein C-terminus binding;0.00261730660301795!GO:0031970;organelle envelope lumen;0.00265144234866828!GO:0005684;U2-dependent spliceosome;0.00275961581703026!GO:0006509;membrane protein ectodomain proteolysis;0.00276648855389511!GO:0033619;membrane protein proteolysis;0.00276648855389511!GO:0006082;organic acid metabolic process;0.00277183005126017!GO:0008312;7S RNA binding;0.00284216618243971!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00290411306189783!GO:0006338;chromatin remodeling;0.00292532511067713!GO:0000922;spindle pole;0.00292532511067713!GO:0030663;COPI coated vesicle membrane;0.00295628399024616!GO:0030126;COPI vesicle coat;0.00295628399024616!GO:0005765;lysosomal membrane;0.00296850615688189!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00299238018363818!GO:0045047;protein targeting to ER;0.00299238018363818!GO:0006352;transcription initiation;0.00299856995963408!GO:0030176;integral to endoplasmic reticulum membrane;0.00322193721983044!GO:0000287;magnesium ion binding;0.00323448309626073!GO:0008180;signalosome;0.00324284694665308!GO:0019222;regulation of metabolic process;0.00329043858401083!GO:0006891;intra-Golgi vesicle-mediated transport;0.00331991987344791!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00333651847272711!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00335762775056857!GO:0005637;nuclear inner membrane;0.00341418870447491!GO:0000725;recombinational repair;0.00357402905085539!GO:0000724;double-strand break repair via homologous recombination;0.00357402905085539!GO:0000082;G1/S transition of mitotic cell cycle;0.00371661988817905!GO:0051087;chaperone binding;0.00379711666737782!GO:0030660;Golgi-associated vesicle membrane;0.0039379558631936!GO:0016741;transferase activity, transferring one-carbon groups;0.00397843008717925!GO:0008168;methyltransferase activity;0.00417621270914066!GO:0016251;general RNA polymerase II transcription factor activity;0.00420535620171189!GO:0006405;RNA export from nucleus;0.0042653885535048!GO:0043488;regulation of mRNA stability;0.00445941567227652!GO:0043487;regulation of RNA stability;0.00445941567227652!GO:0046483;heterocycle metabolic process;0.00472045807408848!GO:0043601;nuclear replisome;0.00473885030124045!GO:0030894;replisome;0.00473885030124045!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00522843439754521!GO:0004177;aminopeptidase activity;0.00527595493793658!GO:0031901;early endosome membrane;0.00535263901872234!GO:0008320;protein transmembrane transporter activity;0.00549833874091454!GO:0003711;transcription elongation regulator activity;0.00562908359057648!GO:0048069;eye pigmentation;0.00571962509431829!GO:0030137;COPI-coated vesicle;0.00588933641681468!GO:0016481;negative regulation of transcription;0.00592905217726419!GO:0006401;RNA catabolic process;0.00599752815941075!GO:0045045;secretory pathway;0.00599824514259958!GO:0008017;microtubule binding;0.00604163607964907!GO:0030119;AP-type membrane coat adaptor complex;0.00604427394111291!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.00605899128187854!GO:0005758;mitochondrial intermembrane space;0.00613163524041244!GO:0001726;ruffle;0.00613291670678298!GO:0031124;mRNA 3'-end processing;0.00620678395898516!GO:0030145;manganese ion binding;0.00640530027555858!GO:0006275;regulation of DNA replication;0.00640530027555858!GO:0006289;nucleotide-excision repair;0.00651429884686603!GO:0030036;actin cytoskeleton organization and biogenesis;0.0068027993737799!GO:0030496;midbody;0.00683123261949229!GO:0008234;cysteine-type peptidase activity;0.00685038516241908!GO:0019206;nucleoside kinase activity;0.0069078402513586!GO:0005869;dynactin complex;0.00691803750948744!GO:0006520;amino acid metabolic process;0.00700674543335396!GO:0050789;regulation of biological process;0.00700713427188409!GO:0050681;androgen receptor binding;0.00701307113403666!GO:0022406;membrane docking;0.00706224066217286!GO:0048278;vesicle docking;0.00706224066217286!GO:0006220;pyrimidine nucleotide metabolic process;0.00715046884686024!GO:0006007;glucose catabolic process;0.00751639972225504!GO:0004003;ATP-dependent DNA helicase activity;0.0077455732670422!GO:0006284;base-excision repair;0.00791921543468497!GO:0016408;C-acyltransferase activity;0.00808785168345632!GO:0051539;4 iron, 4 sulfur cluster binding;0.00822220546723816!GO:0007243;protein kinase cascade;0.00826426435551759!GO:0004674;protein serine/threonine kinase activity;0.00837179937919245!GO:0030131;clathrin adaptor complex;0.00842300833456627!GO:0003746;translation elongation factor activity;0.00849075499248798!GO:0051540;metal cluster binding;0.00873419120068496!GO:0051536;iron-sulfur cluster binding;0.00873419120068496!GO:0030125;clathrin vesicle coat;0.0094874616894266!GO:0030665;clathrin coated vesicle membrane;0.0094874616894266!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00996757993805506!GO:0006582;melanin metabolic process;0.0101054020589694!GO:0006583;melanin biosynthetic process from tyrosine;0.0101054020589694!GO:0042438;melanin biosynthetic process;0.0101054020589694!GO:0005832;chaperonin-containing T-complex;0.0102605562775363!GO:0000070;mitotic sister chromatid segregation;0.0102945176184293!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.010371600127339!GO:0006904;vesicle docking during exocytosis;0.010371600127339!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0107597443341513!GO:0016584;nucleosome positioning;0.0108803956575667!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0108803956575667!GO:0015002;heme-copper terminal oxidase activity;0.0108803956575667!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0108803956575667!GO:0004129;cytochrome-c oxidase activity;0.0108803956575667!GO:0000819;sister chromatid segregation;0.0109183259443276!GO:0050790;regulation of catalytic activity;0.0109847200952761!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0110754322371837!GO:0051053;negative regulation of DNA metabolic process;0.0111074745474027!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0113790592541305!GO:0006144;purine base metabolic process;0.0113790592541305!GO:0006726;eye pigment biosynthetic process;0.0115317851719443!GO:0042441;eye pigment metabolic process;0.0115317851719443!GO:0007021;tubulin folding;0.0117195217580182!GO:0030132;clathrin coat of coated pit;0.0118933124437647!GO:0032984;macromolecular complex disassembly;0.012290154084171!GO:0006778;porphyrin metabolic process;0.0126118545694681!GO:0033013;tetrapyrrole metabolic process;0.0126118545694681!GO:0007041;lysosomal transport;0.0127282715420611!GO:0030140;trans-Golgi network transport vesicle;0.0128476283957355!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0132245186929165!GO:0051287;NAD binding;0.0133466642781747!GO:0042770;DNA damage response, signal transduction;0.0135553643564427!GO:0000209;protein polyubiquitination;0.0140777397037866!GO:0030518;steroid hormone receptor signaling pathway;0.0141993163862272!GO:0005663;DNA replication factor C complex;0.0142104132530415!GO:0043624;cellular protein complex disassembly;0.0143708985721903!GO:0008139;nuclear localization sequence binding;0.0145177427705886!GO:0008047;enzyme activator activity;0.0147476963395322!GO:0016860;intramolecular oxidoreductase activity;0.0149486103375757!GO:0006779;porphyrin biosynthetic process;0.0151900032335555!GO:0033014;tetrapyrrole biosynthetic process;0.0151900032335555!GO:0048154;S100 beta binding;0.0155646542690137!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0158148087337734!GO:0044454;nuclear chromosome part;0.016075646099628!GO:0000726;non-recombinational repair;0.0160885210737227!GO:0030149;sphingolipid catabolic process;0.0162485221942492!GO:0050931;pigment cell differentiation;0.0163911067940195!GO:0030318;melanocyte differentiation;0.0163911067940195!GO:0008408;3'-5' exonuclease activity;0.0164101276997917!GO:0000049;tRNA binding;0.0165337732888961!GO:0043022;ribosome binding;0.0165964306402961!GO:0031570;DNA integrity checkpoint;0.016845326868762!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0169880056150502!GO:0008361;regulation of cell size;0.0172422043658458!GO:0031301;integral to organelle membrane;0.0177565569850162!GO:0016272;prefoldin complex;0.0178175261946641!GO:0044255;cellular lipid metabolic process;0.0178175261946641!GO:0016044;membrane organization and biogenesis;0.0179111907759473!GO:0004448;isocitrate dehydrogenase activity;0.0179188969169315!GO:0000152;nuclear ubiquitin ligase complex;0.0181366328021154!GO:0000178;exosome (RNase complex);0.0185490755974886!GO:0004523;ribonuclease H activity;0.0187340096446221!GO:0050811;GABA receptor binding;0.018777753778815!GO:0009116;nucleoside metabolic process;0.0190298035046598!GO:0030029;actin filament-based process;0.0194062717864856!GO:0008287;protein serine/threonine phosphatase complex;0.0194085947376691!GO:0004503;monophenol monooxygenase activity;0.0194260707697828!GO:0016716;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen;0.0194260707697828!GO:0016747;transferase activity, transferring groups other than amino-acyl groups;0.0205124457052235!GO:0006376;mRNA splice site selection;0.0206544049398281!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0206544049398281!GO:0006378;mRNA polyadenylation;0.0209258181803362!GO:0032200;telomere organization and biogenesis;0.0210147159210252!GO:0000723;telomere maintenance;0.0210147159210252!GO:0007050;cell cycle arrest;0.0214044121815701!GO:0000339;RNA cap binding;0.0218709883481829!GO:0016407;acetyltransferase activity;0.0219514228212781!GO:0031371;ubiquitin conjugating enzyme complex;0.0220736160853062!GO:0005938;cell cortex;0.0226080791873707!GO:0043241;protein complex disassembly;0.0226819232917762!GO:0031123;RNA 3'-end processing;0.0231947661552196!GO:0005669;transcription factor TFIID complex;0.0232542763645498!GO:0006665;sphingolipid metabolic process;0.0232895133712368!GO:0000118;histone deacetylase complex;0.0232912164862317!GO:0030508;thiol-disulfide exchange intermediate activity;0.0232955240119728!GO:0008632;apoptotic program;0.0237042243610258!GO:0009112;nucleobase metabolic process;0.0238032147233413!GO:0008415;acyltransferase activity;0.023874111457806!GO:0003923;GPI-anchor transamidase activity;0.0240477938529398!GO:0016255;attachment of GPI anchor to protein;0.0240477938529398!GO:0042765;GPI-anchor transamidase complex;0.0240477938529398!GO:0051452;cellular pH reduction;0.0241758770227373!GO:0051453;regulation of cellular pH;0.0241758770227373!GO:0045851;pH reduction;0.0241758770227373!GO:0009262;deoxyribonucleotide metabolic process;0.0248716078959995!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0252089665922702!GO:0010257;NADH dehydrogenase complex assembly;0.0252089665922702!GO:0033108;mitochondrial respiratory chain complex assembly;0.0252089665922702!GO:0016746;transferase activity, transferring acyl groups;0.0253872499436442!GO:0016049;cell growth;0.0257994791156179!GO:0006635;fatty acid beta-oxidation;0.0259811973129588!GO:0004287;prolyl oligopeptidase activity;0.0261227222789327!GO:0043414;biopolymer methylation;0.0262238796001776!GO:0001573;ganglioside metabolic process;0.0266671272595407!GO:0045947;negative regulation of translational initiation;0.0267396331802871!GO:0006740;NADPH regeneration;0.0270979909663324!GO:0006098;pentose-phosphate shunt;0.0270979909663324!GO:0048037;cofactor binding;0.0271718420805108!GO:0004722;protein serine/threonine phosphatase activity;0.0271718420805108!GO:0004532;exoribonuclease activity;0.0271718420805108!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0271718420805108!GO:0001725;stress fiber;0.027443928172996!GO:0032432;actin filament bundle;0.027443928172996!GO:0022411;cellular component disassembly;0.0276764361008322!GO:0008299;isoprenoid biosynthetic process;0.0279282393938218!GO:0000096;sulfur amino acid metabolic process;0.0279293399460907!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.02807701658345!GO:0031529;ruffle organization and biogenesis;0.0280838543189681!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0282446271119749!GO:0006730;one-carbon compound metabolic process;0.0283614864722874!GO:0006595;polyamine metabolic process;0.0285154578603157!GO:0017166;vinculin binding;0.0285241798101246!GO:0000792;heterochromatin;0.0285887672438788!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0285959506551807!GO:0030433;ER-associated protein catabolic process;0.029538490608505!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.029538490608505!GO:0042168;heme metabolic process;0.029538490608505!GO:0022884;macromolecule transmembrane transporter activity;0.0295933082657764!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0295933082657764!GO:0008538;proteasome activator activity;0.029911828289262!GO:0030134;ER to Golgi transport vesicle;0.0303197012318999!GO:0006661;phosphatidylinositol biosynthetic process;0.0304569027598066!GO:0030127;COPII vesicle coat;0.0312562288493176!GO:0012507;ER to Golgi transport vesicle membrane;0.0312562288493176!GO:0046479;glycosphingolipid catabolic process;0.0312562288493176!GO:0009303;rRNA transcription;0.031434202690869!GO:0000793;condensed chromosome;0.0315575196444071!GO:0016301;kinase activity;0.0318831244381396!GO:0032259;methylation;0.0318901041293959!GO:0003985;acetyl-CoA C-acetyltransferase activity;0.0319362118289951!GO:0008276;protein methyltransferase activity;0.0321951263553779!GO:0001558;regulation of cell growth;0.0327324423300289!GO:0019783;small conjugating protein-specific protease activity;0.0329062603679558!GO:0030911;TPR domain binding;0.033397610919534!GO:0045792;negative regulation of cell size;0.0334524640355963!GO:0035035;histone acetyltransferase binding;0.0339866674449362!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0343662598364976!GO:0016790;thiolester hydrolase activity;0.0346552344101183!GO:0007346;regulation of progression through mitotic cell cycle;0.0351441291925267!GO:0043154;negative regulation of caspase activity;0.0351576305443647!GO:0019318;hexose metabolic process;0.0353931861538924!GO:0005975;carbohydrate metabolic process;0.0353931861538924!GO:0004843;ubiquitin-specific protease activity;0.0354529345304993!GO:0000781;chromosome, telomeric region;0.0357433627884972!GO:0031577;spindle checkpoint;0.0357587139406587!GO:0006892;post-Golgi vesicle-mediated transport;0.0358396242514739!GO:0006783;heme biosynthetic process;0.0358963568590139!GO:0009003;signal peptidase activity;0.0359666593901805!GO:0005784;translocon complex;0.0360882499340896!GO:0008637;apoptotic mitochondrial changes;0.036138105293429!GO:0042026;protein refolding;0.0364211258686537!GO:0043130;ubiquitin binding;0.0364211258686537!GO:0032182;small conjugating protein binding;0.0364211258686537!GO:0051128;regulation of cellular component organization and biogenesis;0.036505245116781!GO:0000030;mannosyltransferase activity;0.0367130787606551!GO:0043087;regulation of GTPase activity;0.0367147714504276!GO:0030041;actin filament polymerization;0.0367147714504276!GO:0033673;negative regulation of kinase activity;0.0369372017581743!GO:0006469;negative regulation of protein kinase activity;0.0369372017581743!GO:0040029;regulation of gene expression, epigenetic;0.0371949605832655!GO:0016125;sterol metabolic process;0.0374645782665194!GO:0005996;monosaccharide metabolic process;0.0375501494312613!GO:0008536;Ran GTPase binding;0.0380841235325611!GO:0004520;endodeoxyribonuclease activity;0.038657391360266!GO:0019377;glycolipid catabolic process;0.038657391360266!GO:0006984;ER-nuclear signaling pathway;0.038657391360266!GO:0006518;peptide metabolic process;0.0398638185342244!GO:0046983;protein dimerization activity;0.039888755987049!GO:0001711;endodermal cell fate commitment;0.039888755987049!GO:0030858;positive regulation of epithelial cell differentiation;0.039888755987049!GO:0031528;microvillus membrane;0.039888755987049!GO:0001706;endoderm formation;0.039888755987049!GO:0004563;beta-N-acetylhexosaminidase activity;0.039888755987049!GO:0006266;DNA ligation;0.0403619156368073!GO:0008156;negative regulation of DNA replication;0.0404889746404212!GO:0030308;negative regulation of cell growth;0.0404889746404212!GO:0006301;postreplication repair;0.0408400617762752!GO:0016311;dephosphorylation;0.0426771507134939!GO:0017134;fibroblast growth factor binding;0.0428856607317354!GO:0016788;hydrolase activity, acting on ester bonds;0.0428856607317354!GO:0031628;opioid receptor binding;0.0428856607317354!GO:0031852;mu-type opioid receptor binding;0.0428856607317354!GO:0044438;microbody part;0.0430949872594345!GO:0044439;peroxisomal part;0.0430949872594345!GO:0007004;telomere maintenance via telomerase;0.0430949872594345!GO:0033170;DNA-protein loading ATPase activity;0.0446670360975477!GO:0003689;DNA clamp loader activity;0.0446670360975477!GO:0006417;regulation of translation;0.0447759512460543!GO:0016791;phosphoric monoester hydrolase activity;0.0453300828441353!GO:0044450;microtubule organizing center part;0.0453300828441353!GO:0051348;negative regulation of transferase activity;0.0463595996951611!GO:0042585;germinal vesicle;0.0464861093098205!GO:0030522;intracellular receptor-mediated signaling pathway;0.047222077690743!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0473569548359044!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.04736878284001!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0482954766924936!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0490604687621032!GO:0046466;membrane lipid catabolic process;0.0498070193294106
|sample_id=11663
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=skin
|top_motifs=HOX{A6,A7,B6,B7}:2.34017222782;PAX6:2.29928714152;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:2.2429720306;TFDP1:1.85627074885;SREBF1,2:1.7154909643;NANOG:1.58301434145;EN1,2:1.51396899721;E2F1..5:1.42687360317;PAX8:1.39495855127;NKX2-3_NKX2-5:1.3911088238;ESRRA:1.37703368243;XCPE1{core}:1.20440390928;GFI1:1.19708310417;NR5A1,2:1.18201354628;NFE2L1:1.14946473824;PBX1:1.1120056004;POU3F1..4:1.10984063924;NFY{A,B,C}:1.05093522949;NR3C1:1.03552193166;POU1F1:1.02856256361;LHX3,4:0.949159290941;HOX{A4,D4}:0.860026739911;bHLH_family:0.847215510746;ZNF143:0.839564861584;NRF1:0.807252209638;SOX{8,9,10}:0.793764851659;JUN:0.784097363755;ELK1,4_GABP{A,B1}:0.756835200485;STAT1,3:0.620822489218;CUX2:0.582576198984;BREu{core}:0.564974579756;YY1:0.541521166545;VSX1,2:0.532103525957;CDC5L:0.530437574012;FOXA2:0.52918401659;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.502810394069;PRRX1,2:0.467236243981;NFIX:0.456371893606;HBP1_HMGB_SSRP1_UBTF:0.433584842228;ALX4:0.421938831715;PAX1,9:0.414702632215;FOXQ1:0.413606162896;HAND1,2:0.402462467248;OCT4_SOX2{dimer}:0.392906486317;RFX2..5_RFXANK_RFXAP:0.388393091718;ZNF238:0.380685819285;ARID5B:0.376726391085;CREB1:0.360416521624;NKX3-1:0.359688584282;ALX1:0.32689206588;ZNF423:0.313680635863;TEF:0.312359594372;ADNP_IRX_SIX_ZHX:0.269905247059;SP1:0.264281166643;XBP1:0.246907682946;GTF2A1,2:0.232311393101;PAX5:0.226878211956;MYB:0.216923797751;HNF4A_NR2F1,2:0.213659195875;SOX5:0.206053975404;MYBL2:0.197091172326;NKX6-1,2:0.194900409056;PAX4:0.188964787224;PDX1:0.188721661301;HOX{A5,B5}:0.173149625891;HSF1,2:0.171838483064;ZFP161:0.156769113426;HES1:0.141679229106;ATF4:0.141667236437;FOX{F1,F2,J1}:0.0945066477706;NHLH1,2:0.0847201276496;RFX1:0.0703816567601;GZF1:0.069661670011;FOSL2:0.048769396802;HIC1:0.0373185927439;RXR{A,B,G}:0.0287798852427;ELF1,2,4:0.0234307137682;ZBTB6:0.0213016247314;LEF1_TCF7_TCF7L1,2:0.0087534596752;FOXM1:0.00503134831252;CRX:0.00100206135673;TFAP2B:-0.00941461776622;POU2F1..3:-0.0260448575229;FOXP3:-0.0314894495594;POU6F1:-0.0374655272468;AR:-0.0391747024406;REST:-0.0433164617071;GTF2I:-0.0460543190832;TFCP2:-0.0669813540096;FOX{D1,D2}:-0.068060031044;GFI1B:-0.0684212912244;SOX2:-0.0737380592888;TLX1..3_NFIC{dimer}:-0.0887061635741;NKX3-2:-0.0915540602099;BACH2:-0.0985853354441;ATF5_CREB3:-0.103417122321;EVI1:-0.105909047921;MTF1:-0.109990055225;MEF2{A,B,C,D}:-0.121972852947;EBF1:-0.128828158181;GCM1,2:-0.141830542534;TP53:-0.145465383299;FOXL1:-0.155920325253;RUNX1..3:-0.157118720491;FOX{I1,J2}:-0.158484075842;FOS_FOS{B,L1}_JUN{B,D}:-0.170866046294;IRF7:-0.198876257514;PAX2:-0.202509574193;EP300:-0.203403394697;ONECUT1,2:-0.205154274504;HNF1A:-0.205350497259;BPTF:-0.206326156773;TAL1_TCF{3,4,12}:-0.210616201684;PAX3,7:-0.211462267518;ZNF384:-0.215090240284;TGIF1:-0.227208675963;NFE2L2:-0.238051188099;RORA:-0.263607831766;NFIL3:-0.271748913135;ZIC1..3:-0.287818250186;KLF4:-0.288194692937;STAT5{A,B}:-0.303113151938;IKZF1:-0.30766079326;SOX17:-0.314446776773;ATF2:-0.336785387597;TOPORS:-0.339690523534;GATA6:-0.340948331716;NFE2:-0.340979441369;SPI1:-0.350882058936;SPIB:-0.352234415664;RBPJ:-0.357096633226;LMO2:-0.357927356423;HLF:-0.359290113052;PPARG:-0.375883295944;EGR1..3:-0.37937905201;FOXP1:-0.39378353326;GATA4:-0.421276405423;IRF1,2:-0.44654574923;DMAP1_NCOR{1,2}_SMARC:-0.452090358155;MED-1{core}:-0.457711145652;UFEwm:-0.458573927576;ETS1,2:-0.467068350561;ZNF148:-0.516656466584;NFKB1_REL_RELA:-0.520262312989;MAFB:-0.538584591308;ESR1:-0.541438137401;NFATC1..3:-0.542357921046;HMGA1,2:-0.547985648072;AHR_ARNT_ARNT2:-0.552781689976;CEBPA,B_DDIT3:-0.554854582629;IKZF2:-0.576218527701;PITX1..3:-0.577645786048;ZBTB16:-0.584277889397;TEAD1:-0.587973389783;FOXD3:-0.591018912881;TBP:-0.600081860747;NR1H4:-0.610110838393;TLX2:-0.6383997021;MTE{core}:-0.672008840719;RXRA_VDR{dimer}:-0.673285456563;NKX2-2,8:-0.681446310669;MAZ:-0.68430231873;NKX2-1,4:-0.68729061562;PRDM1:-0.701759261391;SMAD1..7,9:-0.711089782959;FOXN1:-0.724789209277;HOXA9_MEIS1:-0.746345327753;CDX1,2,4:-0.749812400436;MYFfamily:-0.751719472906;SNAI1..3:-0.75197406332;FOXO1,3,4:-0.755542093513;DBP:-0.76746025584;STAT2,4,6:-0.774650531127;RREB1:-0.806137170418;NR6A1:-0.842066895523;TFAP2{A,C}:-0.853913174694;ZEB1:-0.872247099841;GLI1..3:-0.923696362755;TFAP4:-0.929512214755;SRF:-0.934186067349;MYOD1:-0.993319429259;SPZ1:-1.013726671;MZF1:-1.01991341877;AIRE:-1.05030829006;NANOG{mouse}:-1.10858628226;PATZ1:-1.11182609937;ATF6:-1.20770665525;HIF1A:-1.22808476487;HMX1:-1.22890654994;POU5F1:-1.36468449663;T:-1.48100924629;TBX4,5:-1.57075210995
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11663-122F7;search_select_hide=table117:FF:11663-122F7
}}
}}

Latest revision as of 18:13, 4 June 2020

Name:Melanocyte - dark, donor3
Species:Human (Homo sapiens)
Library ID:CNhs12570
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueskin
dev stageNA
sexNA
ageNA
cell typemelanocyte
cell lineNA
companySciencell/3H
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number4260
catalog numberSC2205-3
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005001
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12570 CAGE DRX008337 DRR009209
Accession ID Hg19

Library idBAMCTSS
CNhs12570 DRZ000634 DRZ002019
Accession ID Hg38

Library idBAMCTSS
CNhs12570 DRZ011984 DRZ013369
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0259
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.511
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.0782
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0.0519
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.0864
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.0184
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.239
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0.0267
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.285
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.327
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.67
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.00365
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.283
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.466
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.0519
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature-0.0194
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90.64
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0.704
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12570

Jaspar motifP-value
MA0002.20.109
MA0003.10.42
MA0004.18.90388e-4
MA0006.10.316
MA0007.10.719
MA0009.10.505
MA0014.10.164
MA0017.10.604
MA0018.20.0122
MA0019.10.381
MA0024.12.51528e-11
MA0025.10.27
MA0027.10.496
MA0028.11.63804e-4
MA0029.10.541
MA0030.10.343
MA0031.10.829
MA0035.20.95
MA0038.13.02638e-4
MA0039.20.0146
MA0040.10.995
MA0041.10.622
MA0042.10.598
MA0043.10.545
MA0046.10.13
MA0047.20.409
MA0048.10.866
MA0050.10.00165
MA0051.10.204
MA0052.10.237
MA0055.10.00524
MA0057.10.519
MA0058.13.26915e-6
MA0059.10.00626
MA0060.17.9507e-18
MA0061.11.08944e-4
MA0062.24.10183e-6
MA0065.20.478
MA0066.10.935
MA0067.18.9128e-4
MA0068.10.0342
MA0069.10.168
MA0070.10.00179
MA0071.10.781
MA0072.10.794
MA0073.10.861
MA0074.10.93
MA0076.15.12905e-5
MA0077.10.288
MA0078.10.448
MA0079.20.292
MA0080.25.55833e-5
MA0081.10.99
MA0083.10.00356
MA0084.10.595
MA0087.10.232
MA0088.10.0421
MA0090.10.12
MA0091.10.975
MA0092.10.442
MA0093.14.47679e-4
MA0099.20.00529
MA0100.10.186
MA0101.10.0489
MA0102.21.46295e-4
MA0103.16.76835e-4
MA0104.26.42499e-4
MA0105.11.85992e-5
MA0106.10.732
MA0107.10.00468
MA0108.20.336
MA0111.10.826
MA0112.20.00204
MA0113.10.438
MA0114.10.597
MA0115.10.157
MA0116.10.013
MA0117.10.46
MA0119.10.245
MA0122.10.733
MA0124.10.0271
MA0125.10.0137
MA0131.10.179
MA0135.10.299
MA0136.10.0261
MA0137.20.157
MA0138.20.745
MA0139.10.344
MA0140.10.515
MA0141.10.304
MA0142.10.781
MA0143.10.804
MA0144.10.0589
MA0145.10.182
MA0146.10.656
MA0147.10.0146
MA0148.10.489
MA0149.10.0262
MA0150.10.0249
MA0152.10.334
MA0153.10.536
MA0154.10.0236
MA0155.10.17
MA0156.10.952
MA0157.10.464
MA0159.10.955
MA0160.10.321
MA0162.10.476
MA0163.10.0157
MA0164.10.0451
MA0258.10.0925
MA0259.10.0216



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12570

Novel motifP-value
10.861
100.328
1000.43
1010.555
1020.142
1030.618
1040.77
1050.811
1061.81654e-4
1070.0036
1080.35
1090.773
110.432
1100.349
1110.672
1120.307
1130.119
1140.19
1150.0664
1160.107
1170.492
1180.901
1190.184
120.969
1200.969
1210.979
1220.578
1230.731
1240.968
1250.117
1260.65
1270.929
1280.11
1290.534
130.62
1300.0782
1310.064
1320.1
1330.899
1340.674
1350.92
1360.0132
1370.952
1380.914
1392.18674e-4
140.962
1400.323
1410.894
1420.212
1430.692
1440.568
1450.469
1460.54
1470.869
1480.0371
1490.0232
150.841
1500.562
1510.434
1520.0773
1530.258
1540.616
1550.934
1560.909
1570.668
1580.63
1590.759
160.656
1600.246
1610.285
1620.707
1630.362
1640.305
1650.287
1660.33
1670.528
1680.894
1690.0875
170.405
180.844
190.477
20.259
200.516
210.36
220.919
230.00445
240.878
250.618
260.274
270.734
280.708
290.404
30.332
300.24
310.92
322.15888e-4
330.755
340.478
350.0572
360.622
370.101
380.979
390.465
40.544
400.429
410.989
420.451
430.175
440.921
450.209
460.364
470.776
480.416
490.357
50.433
500.667
510.736
520.165
530.729
540.874
550.189
560.708
570.365
580.0418
590.0414
60.0608
600.033
610.812
620.00486
630.438
640.911
650.491
660.00588
670.754
680.453
690.722
70.649
700.0411
710.149
720.371
730.3
740.737
750.258
760.335
770.281
780.129
790.495
80.727
800.838
810.391
820.0164
830.933
840.442
850.0322
860.159
870.0908
880.75
890.63
90.347
900.338
910.134
920.00316
930.11
940.87
950.371
960.474
970.549
980.888
990.809



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12570


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000075 (columnar/cuboidal epithelial cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000325 (stuff accumulating cell)
0000147 (pigment cell)
0000710 (neurecto-epithelial cell)
0000255 (eukaryotic cell)
0002077 (ecto-epithelial cell)
0000148 (melanocyte)
0002566 (dark melanocyte)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000089 (human dark melanocyte sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000221 (ectodermal cell)

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