FFCP PHASE1:Hg19::chr10:111767701..111767712,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:111767701..111767712,+ to FFCP PHASE1:Hg19::chr10:111767701..111767712,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=120 | |EntrezGene=120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=245 | |HGNC=245 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UEY8,Q5VU08 | |UniProt=Q9UEY8,Q5VU08 | ||
|association_with_transcript=0bp_to_NM_001121,NM_016824,uc001kyv.2,uc001kyw.2_5end | |||
|cluster_id=chr10:111767701..111767712,+ | |||
|description=CAGE_peak_7_at_ADD3_5end | |||
|id=chr10:111767701..111767712,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.10e-07!18;CL:0000789!2.10e-07!18;CL:0002420!2.10e-07!18;CL:0002419!2.10e-07!18;CL:0000790!2.10e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.74e-07;18!CL:0000789;1.74e-07;18!CL:0002419;1.74e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.04e-07,18;CL:0000789,1.04e-07,18;CL:0002420,1.04e-07,18;CL:0002419,1.04e-07,18;CL:0000790,1.04e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;1.74e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.00e-31!115;UBERON:0001049!5.79e-14!57;UBERON:0005068!5.79e-14!57;UBERON:0006241!5.79e-14!57;UBERON:0007135!5.79e-14!57;UBERON:0000955!2.52e-13!69;UBERON:0006238!2.52e-13!69;UBERON:0002616!1.42e-12!59;UBERON:0002780!1.44e-12!41;UBERON:0001890!1.44e-12!41;UBERON:0006240!1.44e-12!41;UBERON:0003080!2.17e-12!42;UBERON:0001017!3.39e-10!82;UBERON:0003075!4.50e-10!86;UBERON:0007284!4.50e-10!86;UBERON:0002346!1.47e-09!90;UBERON:0005743!2.53e-09!86;UBERON:0001893!2.89e-09!34;UBERON:0002020!3.22e-09!34;UBERON:0003528!3.22e-09!34;UBERON:0002791!8.01e-09!33;UBERON:0000153!2.22e-08!129;UBERON:0007811!2.22e-08!129;UBERON:0001869!2.30e-08!32;UBERON:0000073!5.90e-08!94;UBERON:0001016!5.90e-08!94;UBERON:0003056!1.01e-07!61;UBERON:0000033!3.47e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;6.75e-10;114!UBERON:0000073;1.45e-09;53!UBERON:0002616;1.45e-09;53!UBERON:0002780;2.17e-09;41!UBERON:0001890;2.17e-09;41!UBERON:0001893;1.29e-08;34!UBERON:0003528;3.12e-08;34!UBERON:0002020;3.12e-08;34!UBERON:0002791;4.16e-08;32!UBERON:0001869;7.68e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.05e-31,114;UBERON:0000073,1.68e-15,53;UBERON:0002616,1.68e-15,53;UBERON:0001049,5.19e-15,56;UBERON:0005068,5.19e-15,56;UBERON:0006241,5.19e-15,56;UBERON:0007135,5.19e-15,56;UBERON:0000955,2.41e-14,68;UBERON:0006238,2.41e-14,68;UBERON:0002780,1.28e-13,41;UBERON:0001890,1.28e-13,41;UBERON:0003080,1.28e-13,41;UBERON:0006240,1.28e-13,41;UBERON:0001017,3.31e-11,81;UBERON:0003075,5.23e-11,82;UBERON:0007284,5.23e-11,82;UBERON:0002346,1.84e-10,86;UBERON:0001893,4.18e-10,34;UBERON:0003528,4.70e-10,34;UBERON:0002020,4.70e-10,34;UBERON:0001016,2.09e-09,89;UBERON:0003056,3.09e-09,61;UBERON:0002791,3.51e-09,32;UBERON:0001869,3.80e-09,32;UBERON:0010314,1.09e-08,132 | |||
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| ||
|short_description=p7@ADD3 | |||
}} | }} |
Latest revision as of 07:46, 16 September 2015
Short description: | p7@ADD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ADD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001121, NM_016824, uc001kyv.2, uc001kyw.2_5end |
EntrezGene: | ADD3 |
HGNC: | 245 |
UniProt: | Q9UEY8Q5VU08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.04e-07 | 18 |
alpha-beta T cell | 1.04e-07 | 18 |
immature T cell | 1.04e-07 | 18 |
mature T cell | 1.04e-07 | 18 |
immature alpha-beta T cell | 1.04e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.05e-31 | 114 |
regional part of nervous system | 1.68e-15 | 53 |
regional part of brain | 1.68e-15 | 53 |
neural tube | 5.19e-15 | 56 |
neural rod | 5.19e-15 | 56 |
future spinal cord | 5.19e-15 | 56 |
neural keel | 5.19e-15 | 56 |
brain | 2.41e-14 | 68 |
future brain | 2.41e-14 | 68 |
regional part of forebrain | 1.28e-13 | 41 |
forebrain | 1.28e-13 | 41 |
anterior neural tube | 1.28e-13 | 41 |
future forebrain | 1.28e-13 | 41 |
central nervous system | 3.31e-11 | 81 |
neural plate | 5.23e-11 | 82 |
presumptive neural plate | 5.23e-11 | 82 |
neurectoderm | 1.84e-10 | 86 |
telencephalon | 4.18e-10 | 34 |
brain grey matter | 4.70e-10 | 34 |
gray matter | 4.70e-10 | 34 |
nervous system | 2.09e-09 | 89 |
pre-chordal neural plate | 3.09e-09 | 61 |
regional part of telencephalon | 3.51e-09 | 32 |
cerebral hemisphere | 3.80e-09 | 32 |
structure with developmental contribution from neural crest | 1.09e-08 | 132 |