FFCP PHASE1:Hg19::chr10:3878118..3878157,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:3878118..3878157,- to FFCP PHASE1:Hg19::chr10:3878118..3878157,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:3878118..3878157,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr10:3878118..3878157,- | |||
|id=chr10:3878118..3878157,- | |||
|ontology_enrichment_celltype=CL:0000738!1.12e-84!140;CL:0002057!2.89e-75!42;CL:0000766!6.41e-73!76;CL:0000860!2.21e-69!45;CL:0000037!6.76e-69!172;CL:0000566!6.76e-69!172;CL:0000988!5.81e-64!182;CL:0000557!2.66e-63!71;CL:0002031!8.04e-62!124;CL:0002009!1.22e-61!65;CL:0000839!5.06e-61!70;CL:0002032!4.11e-60!165;CL:0000837!4.11e-60!165;CL:0002087!5.52e-59!119;CL:0002194!7.43e-58!63;CL:0000576!7.43e-58!63;CL:0000040!7.43e-58!63;CL:0000559!7.43e-58!63;CL:0000763!1.08e-56!112;CL:0000049!1.08e-56!112;CL:0000134!7.51e-26!358;CL:0002320!6.11e-25!365;CL:0000219!9.81e-22!390;CL:0002393!5.80e-20!9;CL:0002397!5.80e-20!9;CL:0000048!2.04e-19!430;CL:0000034!5.67e-19!444;CL:0000723!7.55e-19!436;CL:0000451!4.19e-14!10;CL:0000094!1.93e-13!8;CL:0000453!1.19e-10!5;CL:0000990!1.34e-10!8;CL:0002371!1.09e-09!591;CL:0000081!2.06e-09!11;CL:0000063!2.12e-09!578;CL:0000144!1.48e-08!625;CL:0000767!3.24e-08!3;CL:0000842!1.14e-07!3;CL:0000784!2.38e-07!3;CL:0000875!2.82e-07!3;CL:0002396!2.82e-07!3;CL:0000623!5.66e-07!3;CL:0000825!5.66e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.45e-44;33!CL:0002057;5.45e-44;33!CL:0000576;2.70e-39;48!CL:0000766;9.95e-35;69!CL:0000473;1.30e-32;39!CL:0000234;1.30e-32;39!CL:0002393;4.38e-23;6!CL:0002397;4.38e-23;6!CL:0002087;1.14e-16;104!CL:0000094;1.40e-16;8!CL:0000763;4.93e-15;100!CL:0000767;9.33e-13;3!CL:0000081;7.20e-12;11!CL:0000226;7.40e-12;3!CL:0000842;7.40e-12;3!CL:0000784;2.69e-11;3!CL:0000738;2.89e-11;136!CL:0000451;4.06e-11;10!CL:0000875;4.28e-11;3!CL:0002396;4.28e-11;3!CL:0000771;2.33e-08;2!CL:0001014;2.38e-08;2!CL:0001016;2.38e-08;2!CL:0000988;9.42e-08;177!CL:0000219;4.64e-07;193!CL:0000453;5.72e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.09e-77,42;CL:0002057,1.09e-77,42;CL:0000766,5.84e-76,72;CL:0000473,2.17e-71,48;CL:0000234,2.17e-71,48;CL:0000557,1.82e-65,67;CL:0000738,5.39e-65,136;CL:0002009,6.96e-65,61;CL:0002194,2.73e-59,59;CL:0000576,2.73e-59,59;CL:0000040,2.73e-59,59;CL:0000559,2.73e-59,59;CL:0000839,5.80e-59,66;CL:0000763,7.56e-56,108;CL:0000049,7.56e-56,108;CL:0000037,1.23e-50,168;CL:0000988,1.58e-47,177;CL:0002032,4.19e-42,161;CL:0000837,4.19e-42,161;CL:0002087,1.35e-41,115;CL:0002031,1.63e-41,120;CL:0002393,1.55e-32,9;CL:0002397,1.55e-32,9;CL:0000134,2.05e-20,354;CL:0002320,8.37e-20,361;CL:0000219,1.19e-17,386;CL:0000094,1.38e-16,8;CL:0000034,4.11e-15,441;CL:0000048,5.18e-15,427;CL:0000723,1.20e-14,433;CL:0000767,9.52e-13,3;CL:0000081,7.13e-12,11;CL:0000226,7.82e-12,3;CL:0000842,7.82e-12,3;CL:0000784,2.69e-11,3;CL:0000875,3.58e-11,3;CL:0002396,3.58e-11,3;CL:0000451,3.73e-11,10;CL:0000771,2.17e-08,2;CL:0001014,2.25e-08,2;CL:0001016,2.25e-08,2;CL:0000453,5.20e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;5.03e-51;42!CL:0000049;4.53e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.97e-57!80;UBERON:0001474!5.02e-52!86;UBERON:0002390!6.82e-52!102;UBERON:0003061!6.82e-52!102;UBERON:0002193!7.82e-46!112;UBERON:0004765!4.13e-42!101;UBERON:0001434!4.13e-42!101;UBERON:0002405!3.10e-40!115;UBERON:0002384!1.06e-23!375;UBERON:0002204!8.47e-22!167;UBERON:0003081!7.97e-19!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.51e-57,76;UBERON:0001474,5.49e-52,82;UBERON:0002390,2.45e-50,98;UBERON:0003061,2.45e-50,98;UBERON:0004765,1.29e-46,90;UBERON:0002193,7.73e-45,108;UBERON:0002405,7.75e-45,93;UBERON:0001434,4.24e-41,100;UBERON:0002204,4.18e-21,167;UBERON:0003081,1.65e-19,203;UBERON:0002384,5.71e-19,371;UBERON:0000926,2.65e-09,315;UBERON:0004120,2.65e-09,315;UBERON:0006603,2.65e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,38.5496991311926,37.6152810135268,30.3439601699509,0,0,0,0,0,0.880801318004542,113.015063340503,60.1633342410425,81.3790765184444,0,0,0,0.581592955118259,0,0.727752183563449,0.929716147622738,0.822335776043652,4.33588919253145,4.02769349251011,2.0492856522328,11.5876292645407,29.9928742240858,15.4916324060118,17.6054432572644,0.564727018627814,1.36453075028923,1.79778787556068,32.7509764836866,32.4138317346855,30.688182038354,0.329851300186716,0.398927315243264,0.852449501065388,12.1887880224005,9.64554881974938,14.3249117268982,1.25624332628372,0,2.17188844705117,5.44859552370032,21.3601028872788,25.3169909952708,4.64761629886272,11.0554235981823,11.9505427939774,0.44931452458598,2.25265339262259,1.6072558669708,3.70516566863623,1.79025009479181,3.65328307529268,0,0,0,0,0,0,0,0,0.569212969109448,5.28513470433845,1.14681968437569,0,8.40762844472304,0,0.786839080455332,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451725357233318,0.255973222308837,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0.174129737299267,0,5.00830311041218,2.28797964312051,2.22874500797739,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,1.03664057770386,0.432359860250884,1.2624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,2.56139988262505,0.431255149719035,4.2353201972317,0,0,0,0,0,0.749007023947182,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10152039184331,15.5314224589404,9.3920250867031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,4.49947783103001,8.51182150013745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.664324201566815,1.4720885483026,0,0,0,0.59996218756479,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,38.5496991311926,37.6152810135268,30.3439601699509,0,0,0,0,0,0.880801318004542,113.015063340503,60.1633342410425,81.3790765184444,0,0,0,0.581592955118259,0,0.727752183563449,0.929716147622738,0.822335776043652,4.33588919253145,4.02769349251011,2.0492856522328,11.5876292645407,29.9928742240858,15.4916324060118,17.6054432572644,0.564727018627814,1.36453075028923,1.79778787556068,32.7509764836866,32.4138317346855,30.688182038354,0.329851300186716,0.398927315243264,0.852449501065388,12.1887880224005,9.64554881974938,14.3249117268982,1.25624332628372,0,2.17188844705117,5.44859552370032,21.3601028872788,25.3169909952708,4.64761629886272,11.0554235981823,11.9505427939774,0.44931452458598,2.25265339262259,1.6072558669708,3.70516566863623,1.79025009479181,3.65328307529268,0,0,0,0,0,0,0,0,0.569212969109448,5.28513470433845,1.14681968437569,0,8.40762844472304,0,0.786839080455332,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451725357233318,0.255973222308837,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0.174129737299267,0,5.00830311041218,2.28797964312051,2.22874500797739,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,1.03664057770386,0.432359860250884,1.2624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,2.56139988262505,0.431255149719035,4.2353201972317,0,0,0,0,0,0.749007023947182,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10152039184331,15.5314224589404,9.3920250867031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,4.49947783103001,8.51182150013745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.664324201566815,1.4720885483026,0,0,0,0.59996218756479,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:3878118..3878157,- | |||
}} | }} |
Latest revision as of 13:36, 23 July 2015
Short description: | p@chr10:3878118..3878157, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3878118..3878157, - |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.51e-57 | 76 |
bone element | 5.49e-52 | 82 |
hematopoietic system | 2.45e-50 | 98 |
blood island | 2.45e-50 | 98 |
skeletal element | 1.29e-46 | 90 |
hemolymphoid system | 7.73e-45 | 108 |
immune system | 7.75e-45 | 93 |
skeletal system | 4.24e-41 | 100 |
musculoskeletal system | 4.18e-21 | 167 |
lateral plate mesoderm | 1.65e-19 | 203 |
connective tissue | 5.71e-19 | 371 |
mesoderm | 2.65e-09 | 315 |
mesoderm-derived structure | 2.65e-09 | 315 |
presumptive mesoderm | 2.65e-09 | 315 |