FFCP PHASE1:Hg19::chr10:60272624..60272640,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:60272624..60272640,+ to FFCP PHASE1:Hg19::chr10:60272624..60272640,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80114 | |EntrezGene=80114 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19351 | |HGNC=19351 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H694 | |UniProt=Q9H694 | ||
|association_with_transcript=-259bp_to_ENST00000373886_5end | |||
|cluster_id=chr10:60272624..60272640,+ | |||
|coexpression_cluster_id=C3029 | |||
|description=CAGE_peak_1_at_BICC1_5end | |||
|id=chr10:60272624..60272640,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.07e-32!180;CL:0000057!4.17e-18!75;CL:0000680!1.76e-13!57;CL:0000056!1.76e-13!57;CL:0000355!1.76e-13!57;CL:0000187!1.01e-12!54;CL:0000183!1.66e-12!59;CL:0000393!5.98e-11!60;CL:0000211!5.98e-11!60;CL:0000192!2.49e-09!42;CL:0000514!2.49e-09!42;CL:0000359!2.46e-08!32;CL:0002494!4.96e-08!16 | |||
|ontology_enrichment_celltype_v019=CL:0002494;1.52e-08;16!CL:0000359;8.70e-08;32!CL:0000187;1.54e-07;55!CL:0000192;2.02e-07;43!CL:0000057;2.06e-07;73!CL:0002320;2.16e-07;188!CL:0002620;5.57e-07;23!CL:1000507;9.71e-07;10!CL:1000494;9.71e-07;10!CL:0000499;9.81e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.39e-19,76;CL:0000680,2.57e-13,58;CL:0000056,2.57e-13,58;CL:0000355,2.57e-13,58;CL:0000187,1.63e-12,55;CL:0000393,5.06e-10,61;CL:0000211,5.06e-10,61;CL:0000192,5.93e-09,43;CL:0000514,5.93e-09,43;CL:0002494,1.72e-08,16;CL:0000359,7.54e-08,32;CL:0002620,5.85e-07,23;CL:0000499,9.05e-07,28;CL:1000507,9.51e-07,10;CL:1000494,9.51e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;2.02e-07;43!CL:0000355;2.32e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!4.73e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.04e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.92e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000481!4.17e-22!347;UBERON:0005256!1.51e-21!143;UBERON:0000475!5.26e-21!365;UBERON:0000914!9.28e-18!83;UBERON:0002329!9.28e-18!83;UBERON:0003077!9.28e-18!83;UBERON:0003059!9.28e-18!83;UBERON:0007282!9.28e-18!83;UBERON:0009618!9.28e-18!83;UBERON:0007285!9.28e-18!83;UBERON:0003104!1.08e-17!238;UBERON:0009142!1.08e-17!238;UBERON:0002100!8.29e-17!216;UBERON:0004290!1.20e-15!70;UBERON:0000486!6.83e-15!82;UBERON:0001134!1.04e-14!61;UBERON:0002036!1.04e-14!61;UBERON:0003082!1.04e-14!61;UBERON:0002385!1.57e-14!63;UBERON:0001015!1.57e-14!63;UBERON:0000383!1.57e-14!63;UBERON:0000468!1.37e-13!659;UBERON:0000119!1.13e-12!312;UBERON:0000467!1.86e-12!625;UBERON:0003103!2.47e-12!69;UBERON:0000483!2.55e-12!309;UBERON:0000480!3.31e-12!626;UBERON:0000477!8.71e-11!286;UBERON:0000948!2.83e-10!24;UBERON:0005498!2.83e-10!24;UBERON:0004140!2.83e-10!24;UBERON:0009881!2.83e-10!24;UBERON:0004141!2.83e-10!24;UBERON:0003084!2.83e-10!24;UBERON:0007005!2.83e-10!24;UBERON:0004139!2.83e-10!24;UBERON:0004291!2.83e-10!24;UBERON:0003914!3.41e-10!118;UBERON:0007100!4.06e-10!27;UBERON:0003102!8.10e-10!95;UBERON:0002050!2.77e-09!605;UBERON:0005423!2.77e-09!605;UBERON:0000062!4.69e-09!511;UBERON:0000923!4.78e-09!604;UBERON:0005291!4.78e-09!604;UBERON:0006598!4.78e-09!604;UBERON:0002532!4.78e-09!604;UBERON:0000922!6.10e-09!612;UBERON:0000479!1.82e-07!787;UBERON:0002553!2.94e-07!70;UBERON:0000490!3.42e-07!138;UBERON:0003886!4.03e-07!63;UBERON:0004573!6.34e-07!33;UBERON:0004571!6.34e-07!33;UBERON:0000926!6.84e-07!448;UBERON:0004120!6.84e-07!448;UBERON:0006603!6.84e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;2.10e-10;22!UBERON:0007100;3.60e-10;25!UBERON:0002385;1.13e-09;31!UBERON:0001015;1.13e-09;31!UBERON:0000383;1.13e-09;31!UBERON:0002204;1.57e-07;70!UBERON:0004573;7.78e-07;33!UBERON:0004571;7.78e-07;33!UBERON:0004211;9.71e-07;10!UBERON:0009773;9.71e-07;10!UBERON:0001231;9.71e-07;10!UBERON:0004810;9.71e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.45e-22,160;UBERON:0009142,1.45e-22,160;UBERON:0005256,2.41e-16,122;UBERON:0007503,6.03e-16,78;UBERON:0007524,6.07e-16,73;UBERON:0002329,1.18e-15,71;UBERON:0003059,1.18e-15,71;UBERON:0007282,1.18e-15,71;UBERON:0004290,1.18e-15,71;UBERON:0009618,1.18e-15,71;UBERON:0003077,1.70e-15,72;UBERON:0007285,1.70e-15,72;UBERON:0002100,3.64e-15,199;UBERON:0001134,1.31e-14,62;UBERON:0002036,1.31e-14,62;UBERON:0003082,1.31e-14,62;UBERON:0002385,1.91e-14,64;UBERON:0001015,1.91e-14,64;UBERON:0000383,1.91e-14,64;UBERON:0000486,5.86e-14,83;UBERON:0003103,2.59e-12,68;UBERON:0003914,2.32e-11,117;UBERON:0000948,6.85e-11,24;UBERON:0005498,6.85e-11,24;UBERON:0004140,6.85e-11,24;UBERON:0009881,6.85e-11,24;UBERON:0004141,6.85e-11,24;UBERON:0003084,6.85e-11,24;UBERON:0007005,6.85e-11,24;UBERON:0004139,6.85e-11,24;UBERON:0004291,6.85e-11,24;UBERON:0007100,1.01e-10,27;UBERON:0000119,1.89e-09,309;UBERON:0000490,3.15e-09,148;UBERON:0000483,3.93e-09,306;UBERON:0003102,9.53e-09,99;UBERON:0004573,1.55e-07,33;UBERON:0004571,1.55e-07,33;UBERON:0000479,6.04e-07,773;UBERON:0004810,9.51e-07,10 | |||
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| ||
|short_description=p1@BICC1 | |||
}} | }} |
Latest revision as of 14:46, 18 September 2015
Short description: | p1@BICC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BICC1_5end |
Coexpression cluster: | C3029_Cardiac_tridermal_sacrococcigeal_mesothelioma_endometrial_tenocyte_Fibroblast |
Association with transcript: | -259bp_to_ENST00000373886_5end |
EntrezGene: | BICC1 |
HGNC: | 19351 |
UniProt: | Q9H694 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.39e-19 | 76 |
muscle precursor cell | 2.57e-13 | 58 |
myoblast | 2.57e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.57e-13 | 58 |
muscle cell | 1.63e-12 | 55 |
electrically responsive cell | 5.06e-10 | 61 |
electrically active cell | 5.06e-10 | 61 |
smooth muscle cell | 5.93e-09 | 43 |
smooth muscle myoblast | 5.93e-09 | 43 |
cardiocyte | 1.72e-08 | 16 |
vascular associated smooth muscle cell | 7.54e-08 | 32 |
skin fibroblast | 5.85e-07 | 23 |
stromal cell | 9.05e-07 | 28 |
kidney tubule cell | 9.51e-07 | 10 |
nephron tubule epithelial cell | 9.51e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.92e-07 | 14 |