FFCP PHASE1:Hg19::chr11:33279850..33279931,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:33279850..33279931,+ to FFCP PHASE1:Hg19::chr11:33279850..33279931,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10114 | |EntrezGene=10114 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4915 | |HGNC=4915 | ||
|TSSclassifier=strong | |||
|UniProt=E9PKD7 | |UniProt=E9PKD7 | ||
|association_with_transcript=0bp_to_ENST00000456517,ENST00000531504,uc009yjv.1_5end | |||
|cluster_id=chr11:33279850..33279931,+ | |||
|coexpression_cluster_id=C3145 | |||
|description=CAGE_peak_2_at_HIPK3_5end | |||
|id=chr11:33279850..33279931,+ | |||
|ontology_enrichment_celltype=CL:0000766!8.48e-27!76;CL:0002057!8.64e-26!42;CL:0000860!1.98e-24!45;CL:0002009!1.03e-23!65;CL:0000557!1.24e-23!71;CL:0000763!1.76e-23!112;CL:0000049!1.76e-23!112;CL:0002194!5.81e-23!63;CL:0000576!5.81e-23!63;CL:0000040!5.81e-23!63;CL:0000559!5.81e-23!63;CL:0000839!9.32e-21!70;CL:0000037!4.74e-11!172;CL:0000566!4.74e-11!172;CL:0002032!1.52e-10!165;CL:0000837!1.52e-10!165;CL:0000738!2.94e-10!140;CL:0000988!1.50e-09!182;CL:0002087!5.63e-08!119;CL:0002031!2.14e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.25e-23;33!CL:0002057;2.25e-23;33!CL:0000576;6.37e-21;48!CL:0000473;5.18e-19;39!CL:0000234;5.18e-19;39!CL:0000766;1.93e-15;69!CL:0000763;1.22e-10;100!CL:0000094;4.73e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.77e-34,72;CL:0000860,6.42e-31,42;CL:0002057,6.42e-31,42;CL:0000557,6.62e-30,67;CL:0002009,1.04e-29,61;CL:0000473,1.41e-29,48;CL:0000234,1.41e-29,48;CL:0000763,1.70e-29,108;CL:0000049,1.70e-29,108;CL:0002194,8.36e-29,59;CL:0000576,8.36e-29,59;CL:0000040,8.36e-29,59;CL:0000559,8.36e-29,59;CL:0000839,1.67e-26,66;CL:0000037,7.09e-15,168;CL:0002032,2.36e-14,161;CL:0000837,2.36e-14,161;CL:0000738,2.32e-13,136;CL:0000988,1.07e-12,177;CL:0002087,8.17e-11,115;CL:0002031,2.00e-10,120;CL:0000094,4.82e-07,8;CL:0002393,9.26e-07,9;CL:0002397,9.26e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.11e-22;42!CL:0000049;6.32e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.46e-36!115;UBERON:0002390!6.74e-27!102;UBERON:0003061!6.74e-27!102;UBERON:0002193!3.41e-25!112;UBERON:0002371!7.27e-23!80;UBERON:0001474!7.63e-21!86;UBERON:0004765!3.65e-17!101;UBERON:0001434!3.65e-17!101;UBERON:0002405!1.41e-16!115;UBERON:0002204!2.03e-09!167;UBERON:0001049!8.64e-09!57;UBERON:0005068!8.64e-09!57;UBERON:0006241!8.64e-09!57;UBERON:0007135!8.64e-09!57;UBERON:0002616!5.16e-08!59;UBERON:0000955!2.09e-07!69;UBERON:0006238!2.09e-07!69;UBERON:0000479!2.11e-07!787;UBERON:0000062!2.49e-07!511;UBERON:0003080!3.81e-07!42;UBERON:0001017!4.22e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.37e-10;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.13e-41,114;UBERON:0002390,4.14e-32,98;UBERON:0003061,4.14e-32,98;UBERON:0002193,2.31e-29,108;UBERON:0002371,1.15e-28,76;UBERON:0001474,3.72e-26,82;UBERON:0004765,5.34e-25,90;UBERON:0002405,5.03e-24,93;UBERON:0001434,3.66e-22,100;UBERON:0003081,8.40e-12,203;UBERON:0002204,1.78e-11,167;UBERON:0001049,4.92e-08,56;UBERON:0005068,4.92e-08,56;UBERON:0006241,4.92e-08,56;UBERON:0007135,4.92e-08,56;UBERON:0000479,5.89e-08,773;UBERON:0000926,1.96e-07,315;UBERON:0004120,1.96e-07,315;UBERON:0006603,1.96e-07,315;UBERON:0000073,5.20e-07,53;UBERON:0002616,5.20e-07,53 | |||
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| ||
|short_description=p2@HIPK3 | |||
}} | }} |
Latest revision as of 16:29, 17 September 2015
Short description: | p2@HIPK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HIPK3_5end |
Coexpression cluster: | C3145_Neutrophils_left_CD14_heart_Eosinophils_breast_mature |
Association with transcript: | 0bp_to_ENST00000456517, ENST00000531504, uc009yjv.1_5end |
EntrezGene: | HIPK3 |
HGNC: | 4915 |
UniProt: | E9PKD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.77e-34 | 72 |
classical monocyte | 6.42e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.42e-31 | 42 |
granulocyte monocyte progenitor cell | 6.62e-30 | 67 |
macrophage dendritic cell progenitor | 1.04e-29 | 61 |
defensive cell | 1.41e-29 | 48 |
phagocyte | 1.41e-29 | 48 |
myeloid cell | 1.70e-29 | 108 |
common myeloid progenitor | 1.70e-29 | 108 |
monopoietic cell | 8.36e-29 | 59 |
monocyte | 8.36e-29 | 59 |
monoblast | 8.36e-29 | 59 |
promonocyte | 8.36e-29 | 59 |
myeloid lineage restricted progenitor cell | 1.67e-26 | 66 |
hematopoietic stem cell | 7.09e-15 | 168 |
hematopoietic oligopotent progenitor cell | 2.36e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.36e-14 | 161 |
leukocyte | 2.32e-13 | 136 |
hematopoietic cell | 1.07e-12 | 177 |
nongranular leukocyte | 8.17e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 2.00e-10 | 120 |
granulocyte | 4.82e-07 | 8 |
intermediate monocyte | 9.26e-07 | 9 |
CD14-positive, CD16-positive monocyte | 9.26e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.13e-41 | 114 |
hematopoietic system | 4.14e-32 | 98 |
blood island | 4.14e-32 | 98 |
hemolymphoid system | 2.31e-29 | 108 |
bone marrow | 1.15e-28 | 76 |
bone element | 3.72e-26 | 82 |
skeletal element | 5.34e-25 | 90 |
immune system | 5.03e-24 | 93 |
skeletal system | 3.66e-22 | 100 |
lateral plate mesoderm | 8.40e-12 | 203 |
musculoskeletal system | 1.78e-11 | 167 |
neural tube | 4.92e-08 | 56 |
neural rod | 4.92e-08 | 56 |
future spinal cord | 4.92e-08 | 56 |
neural keel | 4.92e-08 | 56 |
tissue | 5.89e-08 | 773 |
mesoderm | 1.96e-07 | 315 |
mesoderm-derived structure | 1.96e-07 | 315 |
presumptive mesoderm | 1.96e-07 | 315 |
regional part of nervous system | 5.20e-07 | 53 |
regional part of brain | 5.20e-07 | 53 |