FFCP PHASE1:Hg19::chr12:69743928..69743957,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:69743928..69743957,+ to FFCP PHASE1:Hg19::chr12:69743928..69743957,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:69743928..69743957,+ | |||
|coexpression_cluster_id=C501 | |||
|description=CAGE_peak_at_chr12:69743928..69743957,+ | |||
|id=chr12:69743928..69743957,+ | |||
|ontology_enrichment_celltype=CL:0002194!4.17e-68!63;CL:0000576!4.17e-68!63;CL:0000040!4.17e-68!63;CL:0000559!4.17e-68!63;CL:0002009!2.22e-65!65;CL:0000766!5.15e-64!76;CL:0000839!3.04e-59!70;CL:0002057!8.59e-59!42;CL:0000557!4.03e-58!71;CL:0000860!9.17e-54!45;CL:0000763!5.93e-53!112;CL:0000049!5.93e-53!112;CL:0002087!5.50e-43!119;CL:0000738!2.61e-42!140;CL:0000037!2.98e-42!172;CL:0000566!2.98e-42!172;CL:0002032!1.13e-38!165;CL:0000837!1.13e-38!165;CL:0000988!2.15e-38!182;CL:0002031!5.65e-36!124;CL:0002393!5.18e-12!9;CL:0002397!5.18e-12!9;CL:0000134!2.45e-10!358;CL:0002320!1.10e-09!365;CL:0000219!1.86e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.19e-63;33!CL:0002057;5.19e-63;33!CL:0000473;5.05e-62;39!CL:0000234;5.05e-62;39!CL:0000576;2.73e-53;48!CL:0000766;1.28e-37;69!CL:0000763;3.04e-20;100!CL:0002087;7.89e-13;104!CL:0000235;1.12e-12;6!CL:0002393;1.42e-12;6!CL:0002397;1.42e-12;6!CL:0000738;1.26e-11;136!CL:0000988;3.79e-07;177!CL:0000767;6.36e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.64e-95,59;CL:0000576,2.64e-95,59;CL:0000040,2.64e-95,59;CL:0000559,2.64e-95,59;CL:0000473,1.48e-93,48;CL:0000234,1.48e-93,48;CL:0002009,1.09e-91,61;CL:0000766,8.21e-88,72;CL:0000839,1.35e-83,66;CL:0000557,4.05e-82,67;CL:0000860,9.31e-82,42;CL:0002057,9.31e-82,42;CL:0000763,8.71e-64,108;CL:0000049,8.71e-64,108;CL:0002087,1.55e-48,115;CL:0000738,7.21e-47,136;CL:0000037,8.70e-42,168;CL:0002031,1.65e-40,120;CL:0000988,1.03e-38,177;CL:0002032,2.56e-38,161;CL:0000837,2.56e-38,161;CL:0002393,1.20e-13,9;CL:0002397,1.20e-13,9;CL:0000235,1.21e-12,6;CL:0000134,1.41e-11,354;CL:0002320,5.09e-11,361;CL:0000219,4.45e-09,386;CL:0000767,6.43e-07,3;CL:0000034,7.02e-07,441;CL:0000048,8.98e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;4.45e-59;42!CL:0000049;2.81e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.41e-62!102;UBERON:0003061!1.41e-62!102;UBERON:0002193!2.21e-56!112;UBERON:0002371!4.49e-51!80;UBERON:0001474!4.53e-46!86;UBERON:0002405!2.76e-42!115;UBERON:0004765!3.38e-36!101;UBERON:0001434!3.38e-36!101;UBERON:0003081!1.77e-21!216;UBERON:0002204!1.82e-16!167;UBERON:0000178!8.84e-11!15;UBERON:0000179!8.84e-11!15;UBERON:0000463!8.84e-11!15;UBERON:0002384!3.21e-09!375;UBERON:0000926!8.11e-09!448;UBERON:0004120!8.11e-09!448;UBERON:0006603!8.11e-09!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.31e-15;15!UBERON:0000179;1.31e-15;15!UBERON:0000463;1.31e-15;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.03e-79,98;UBERON:0003061,3.03e-79,98;UBERON:0002371,1.44e-70,76;UBERON:0002193,3.12e-70,108;UBERON:0001474,2.89e-64,82;UBERON:0004765,3.68e-57,90;UBERON:0002405,8.25e-55,93;UBERON:0001434,7.15e-50,100;UBERON:0003081,2.48e-31,203;UBERON:0002204,1.03e-24,167;UBERON:0000178,1.44e-15,15;UBERON:0000179,1.44e-15,15;UBERON:0000463,1.44e-15,15;UBERON:0000926,1.77e-14,315;UBERON:0004120,1.77e-14,315;UBERON:0006603,1.77e-14,315;UBERON:0002384,2.90e-10,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.04737836752479,6.90892916574983,6.19264493264304,0,0,0,0,0,0.587200878669695,6.64794490238253,7.82123345133553,15.1907609501096,3.58264758783879,4.85840499028469,5.15151135268373,14.2490274003973,14.7371618038636,15.0402117936446,20.4537552477002,19.7360586250476,9.91060386864331,21.5769294241613,21.7736600549736,19.8645073106412,27.2349087781929,18.719055823931,12.1883837934908,16.0005988611214,15.5556505532972,14.8317499733756,18.0589496498833,19.5766706516417,13.4260796417799,19.791078011203,18.3506565011901,18.3276642729058,12.7692064996577,8.5107783703671,14.3249117268982,28.1398505087552,32.8534238604727,19.7641848681656,17.5565855763677,16.5724936194404,17.4054313092486,19.4354863406986,4.03948169933583,6.49941801075965,26.0602424259869,20.5742343192864,20.7336006839233,2.56511469367124,0.79566670879636,1.82664153764634,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0.587237189370939,0,0,1.12101712596307,2.37045676297569,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.511946444617674,0,0.710331756132051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,2.92092654289215,1.39303789839414,2.12732736830184,0.476981248610684,1.71598473234038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18568910348575,8.42415354501256,9.66102554876734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.162378064119,6.02708509718552,27.4084121327941,0,0,0,0,0,0,0,0.394061520403854,0,1.02674429023799,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,8.41285383192606,5.76328812138599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,2.02979043692868,1.52927441428475,2.27858874869665,1.19115887728894,1.64544909234478,2.59389324477087,2.70015718619057,2.37937552888281,0,0,0,0,0,0,0,0,1.91505370132367,0,0,0.280797178113459,0,0,0,0.169291777801603,0.481764225311099,3.43059502224781,13.2012333684001,3.09154810280188,0.307240764308458,1.56573275524691,0.333698283423817,0.781552381608161,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0.296964680832639,0,0,0,0,0,0,9.36465544780028,0.276283915531148,0,0,0,0,0,0,1.02314474045374,0,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0.611030144933625,0,0,0,0,0,0,0.182454789215666,0,0,0,4.83962864194656,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25980740780532,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.446342914883745,0,0,0,1.6544468284517,1.31865373409866,0.808842526250219,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,1.81538601365081,0,3.72815149812476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0,1.28030075632969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0.206686796501184,0,0,3.83780436800028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44181887056222,0,0,0,0,0,0,0,0.098150233615243,2.19452264968085,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,1.54348316215889,0.218559560503957,0,0,0,0,0,0,0,0.751871343838829,0.0644578879735772,0,0,0,0,1.46067277649303,11.9269613685181,0,0,0,0,12.1676173318542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3528466968706,0.23806443146374,0.452122368852043,0.124149428591716,0,0,0,3.04803447055746,1.36893320434112,0.673520530145875,17.8588291427764,15.9676971142086,0,0,0,0,4.69281884806909,0.122241444182866,0,0,0.201273793591026,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.04737836752479,6.90892916574983,6.19264493264304,0,0,0,0,0,0.587200878669695,6.64794490238253,7.82123345133553,15.1907609501096,3.58264758783879,4.85840499028469,5.15151135268373,14.2490274003973,14.7371618038636,15.0402117936446,20.4537552477002,19.7360586250476,9.91060386864331,21.5769294241613,21.7736600549736,19.8645073106412,27.2349087781929,18.719055823931,12.1883837934908,16.0005988611214,15.5556505532972,14.8317499733756,18.0589496498833,19.5766706516417,13.4260796417799,19.791078011203,18.3506565011901,18.3276642729058,12.7692064996577,8.5107783703671,14.3249117268982,28.1398505087552,32.8534238604727,19.7641848681656,17.5565855763677,16.5724936194404,17.4054313092486,19.4354863406986,4.03948169933583,6.49941801075965,26.0602424259869,20.5742343192864,20.7336006839233,2.56511469367124,0.79566670879636,1.82664153764634,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0.587237189370939,0,0,1.12101712596307,2.37045676297569,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.511946444617674,0,0.710331756132051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,2.92092654289215,1.39303789839414,2.12732736830184,0.476981248610684,1.71598473234038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18568910348575,8.42415354501256,9.66102554876734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.162378064119,6.02708509718552,27.4084121327941,0,0,0,0,0,0,0,0.394061520403854,0,1.02674429023799,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,8.41285383192606,5.76328812138599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,2.02979043692868,1.52927441428475,2.27858874869665,1.19115887728894,1.64544909234478,2.59389324477087,2.70015718619057,2.37937552888281,0,0,0,0,0,0,0,0,1.91505370132367,0,0,0.280797178113459,0,0,0,0.169291777801603,0.481764225311099,3.43059502224781,13.2012333684001,3.09154810280188,0.307240764308458,1.56573275524691,0.333698283423817,0.781552381608161,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0.296964680832639,0,0,0,0,0,0,9.36465544780028,0.276283915531148,0,0,0,0,0,0,1.02314474045374,0,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0.611030144933625,0,0,0,0,0,0,0.182454789215666,0,0,0,4.83962864194656,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25980740780532,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.446342914883745,0,0,0,1.6544468284517,1.31865373409866,0.808842526250219,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,1.81538601365081,0,3.72815149812476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0,1.28030075632969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0.206686796501184,0,0,3.83780436800028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44181887056222,0,0,0,0,0,0,0,0.098150233615243,2.19452264968085,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,1.54348316215889,0.218559560503957,0,0,0,0,0,0,0,0.751871343838829,0.0644578879735772,0,0,0,0,1.46067277649303,11.9269613685181,0,0,0,0,12.1676173318542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3528466968706,0.23806443146374,0.452122368852043,0.124149428591716,0,0,0,3.04803447055746,1.36893320434112,0.673520530145875,17.8588291427764,15.9676971142086,0,0,0,0,4.69281884806909,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p@chr12:69743928..69743957,+ | |||
}} | }} |
Latest revision as of 11:52, 24 July 2015
Short description: | p@chr12:69743928..69743957, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:69743928..69743957, + |
Coexpression cluster: | C501_CD14_trachea_throat_Basophils_acute_Peripheral_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.64e-95 | 59 |
monocyte | 2.64e-95 | 59 |
monoblast | 2.64e-95 | 59 |
promonocyte | 2.64e-95 | 59 |
defensive cell | 1.48e-93 | 48 |
phagocyte | 1.48e-93 | 48 |
macrophage dendritic cell progenitor | 1.09e-91 | 61 |
myeloid leukocyte | 8.21e-88 | 72 |
myeloid lineage restricted progenitor cell | 1.35e-83 | 66 |
granulocyte monocyte progenitor cell | 4.05e-82 | 67 |
classical monocyte | 9.31e-82 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.31e-82 | 42 |
myeloid cell | 8.71e-64 | 108 |
common myeloid progenitor | 8.71e-64 | 108 |
nongranular leukocyte | 1.55e-48 | 115 |
leukocyte | 7.21e-47 | 136 |
hematopoietic stem cell | 8.70e-42 | 168 |
hematopoietic lineage restricted progenitor cell | 1.65e-40 | 120 |
hematopoietic cell | 1.03e-38 | 177 |
hematopoietic oligopotent progenitor cell | 2.56e-38 | 161 |
hematopoietic multipotent progenitor cell | 2.56e-38 | 161 |
intermediate monocyte | 1.20e-13 | 9 |
CD14-positive, CD16-positive monocyte | 1.20e-13 | 9 |
macrophage | 1.21e-12 | 6 |
mesenchymal cell | 1.41e-11 | 354 |
connective tissue cell | 5.09e-11 | 361 |
motile cell | 4.45e-09 | 386 |
basophil | 6.43e-07 | 3 |
stem cell | 7.02e-07 | 441 |
multi fate stem cell | 8.98e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.03e-79 | 98 |
blood island | 3.03e-79 | 98 |
bone marrow | 1.44e-70 | 76 |
hemolymphoid system | 3.12e-70 | 108 |
bone element | 2.89e-64 | 82 |
skeletal element | 3.68e-57 | 90 |
immune system | 8.25e-55 | 93 |
skeletal system | 7.15e-50 | 100 |
lateral plate mesoderm | 2.48e-31 | 203 |
musculoskeletal system | 1.03e-24 | 167 |
blood | 1.44e-15 | 15 |
haemolymphatic fluid | 1.44e-15 | 15 |
organism substance | 1.44e-15 | 15 |
mesoderm | 1.77e-14 | 315 |
mesoderm-derived structure | 1.77e-14 | 315 |
presumptive mesoderm | 1.77e-14 | 315 |
connective tissue | 2.90e-10 | 371 |