FFCP PHASE1:Hg19::chr17:36981556..36981603,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:36981556..36981603,- to FFCP PHASE1:Hg19::chr17:36981556..36981603,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54883 | |EntrezGene=54883 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25989 | |HGNC=25989 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NXE8,B4DJK2 | |UniProt=Q9NXE8,B4DJK2 | ||
|association_with_transcript=0bp_to_ENST00000225428,ENST00000536127,NM_017748,uc002hqu.2,uc010wdv.1_5end | |||
|cluster_id=chr17:36981556..36981603,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_CWC25_5end | |||
|id=chr17:36981556..36981603,- | |||
|ontology_enrichment_celltype=CL:0000037!1.19e-43!172;CL:0000566!1.19e-43!172;CL:0000738!2.98e-42!140;CL:0002032!2.03e-40!165;CL:0000837!2.03e-40!165;CL:0000988!4.98e-39!182;CL:0002031!7.05e-34!124;CL:0002087!3.45e-31!119;CL:0000763!5.46e-27!112;CL:0000049!5.46e-27!112;CL:0000766!9.38e-25!76;CL:0002057!5.04e-24!42;CL:0000860!2.87e-23!45;CL:0000557!1.50e-21!71;CL:0000839!9.47e-21!70;CL:0002009!7.45e-19!65;CL:0002194!1.02e-17!63;CL:0000576!1.02e-17!63;CL:0000040!1.02e-17!63;CL:0000559!1.02e-17!63;CL:0000542!6.15e-12!53;CL:0000051!6.15e-12!53;CL:0000838!9.41e-12!52;CL:0000134!1.34e-08!358;CL:0000791!2.76e-08!18;CL:0000789!2.76e-08!18;CL:0002420!2.76e-08!18;CL:0002419!2.76e-08!18;CL:0000790!2.76e-08!18;CL:0002320!2.90e-07!365;CL:0000084!5.48e-07!25;CL:0000827!5.48e-07!25;CL:0000094!7.05e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.39e-19;33!CL:0002057;7.39e-19;33!CL:0000576;3.76e-15;48!CL:0000473;1.56e-13;39!CL:0000234;1.56e-13;39!CL:0000766;1.84e-12;69!CL:0002087;3.98e-11;104!CL:0000738;5.47e-09;136!CL:0000791;2.69e-08;18!CL:0000789;2.69e-08;18!CL:0002419;2.69e-08;18!CL:0000763;3.14e-08;100!CL:0000988;1.74e-07;177!CL:0000542;2.94e-07;53!CL:0000084;5.37e-07;25!CL:0000094;6.89e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.60e-44,168;CL:0000738,5.82e-43,136;CL:0002032,6.29e-41,161;CL:0000837,6.29e-41,161;CL:0000988,2.96e-40,177;CL:0002031,1.57e-34,120;CL:0002087,8.15e-32,115;CL:0000763,1.46e-27,108;CL:0000049,1.46e-27,108;CL:0000766,1.22e-25,72;CL:0000860,5.04e-24,42;CL:0002057,5.04e-24,42;CL:0000557,2.27e-22,67;CL:0000839,1.52e-21,66;CL:0000473,4.91e-21,48;CL:0000234,4.91e-21,48;CL:0002009,1.24e-19,61;CL:0002194,1.81e-18,59;CL:0000576,1.81e-18,59;CL:0000040,1.81e-18,59;CL:0000559,1.81e-18,59;CL:0000542,6.15e-12,53;CL:0000051,6.15e-12,53;CL:0000838,9.41e-12,52;CL:0000134,1.08e-08,354;CL:0000791,2.76e-08,18;CL:0000789,2.76e-08,18;CL:0002420,2.76e-08,18;CL:0002419,2.76e-08,18;CL:0000790,2.76e-08,18;CL:0002320,2.41e-07,361;CL:0000084,5.48e-07,25;CL:0000827,5.48e-07,25;CL:0000094,7.05e-07,8;CL:0000219,8.68e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.34e-17;42!CL:0000790;2.69e-08;18!CL:0000049;9.93e-08;108!CL:0000051;2.94e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.56e-25!102;UBERON:0003061!2.56e-25!102;UBERON:0002193!1.92e-21!112;UBERON:0002371!6.73e-18!80;UBERON:0001474!1.38e-16!86;UBERON:0002405!2.33e-13!115;UBERON:0004765!5.37e-13!101;UBERON:0001434!5.37e-13!101;UBERON:0007023!1.98e-08!115;UBERON:0002384!2.29e-07!375;UBERON:0000178!5.54e-07!15;UBERON:0000179!5.54e-07!15;UBERON:0000463!5.54e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.03e-07;15!UBERON:0000179;5.03e-07;15!UBERON:0000463;5.03e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.33e-26,98;UBERON:0003061,6.33e-26,98;UBERON:0002193,7.24e-22,108;UBERON:0002371,1.90e-18,76;UBERON:0001474,4.91e-17,82;UBERON:0002405,2.08e-16,93;UBERON:0004765,2.67e-14,90;UBERON:0001434,3.61e-12,100;UBERON:0007023,2.91e-08,114;UBERON:0002384,1.92e-07,371;UBERON:0000178,5.54e-07,15;UBERON:0000179,5.54e-07,15;UBERON:0000463,5.54e-07,15 | |||
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| ||
|short_description=p1@CWC25 | |||
}} | }} |
Latest revision as of 20:31, 19 September 2015
Short description: | p1@CWC25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CWC25_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000225428, ENST00000536127, NM_017748, uc002hqu.2, uc010wdv.1_5end |
EntrezGene: | CWC25 |
HGNC: | 25989 |
UniProt: | Q9NXE8B4DJK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.33e-26 | 98 |
blood island | 6.33e-26 | 98 |
hemolymphoid system | 7.24e-22 | 108 |
bone marrow | 1.90e-18 | 76 |
bone element | 4.91e-17 | 82 |
immune system | 2.08e-16 | 93 |
skeletal element | 2.67e-14 | 90 |
skeletal system | 3.61e-12 | 100 |
adult organism | 2.91e-08 | 114 |
connective tissue | 1.92e-07 | 371 |
blood | 5.54e-07 | 15 |
haemolymphatic fluid | 5.54e-07 | 15 |
organism substance | 5.54e-07 | 15 |