FFCP PHASE1:Hg19::chr18:9475493..9475572,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:9475493..9475572,+ to FFCP PHASE1:Hg19::chr18:9475493..9475572,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10928 | |EntrezGene=10928 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9841 | |HGNC=9841 | ||
|TSSclassifier=strong | |||
|UniProt=Q15311 | |UniProt=Q15311 | ||
|association_with_transcript=0bp_to_ENST00000383432,NM_006788,uc002koc.2_5end | |||
|cluster_id=chr18:9475493..9475572,+ | |||
|description=CAGE_peak_1_at_RALBP1_5end | |||
|id=chr18:9475493..9475572,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.72e-26!115;UBERON:0001049!1.98e-14!57;UBERON:0005068!1.98e-14!57;UBERON:0006241!1.98e-14!57;UBERON:0007135!1.98e-14!57;UBERON:0000955!3.54e-14!69;UBERON:0006238!3.54e-14!69;UBERON:0002616!9.15e-14!59;UBERON:0000073!1.46e-13!94;UBERON:0001016!1.46e-13!94;UBERON:0001017!5.75e-13!82;UBERON:0005743!2.13e-12!86;UBERON:0003080!3.44e-12!42;UBERON:0002346!7.43e-12!90;UBERON:0002780!7.90e-12!41;UBERON:0001890!7.90e-12!41;UBERON:0006240!7.90e-12!41;UBERON:0003075!9.96e-12!86;UBERON:0007284!9.96e-12!86;UBERON:0002020!1.09e-10!34;UBERON:0003528!1.09e-10!34;UBERON:0001893!1.75e-10!34;UBERON:0002791!4.80e-10!33;UBERON:0000153!7.99e-10!129;UBERON:0007811!7.99e-10!129;UBERON:0001869!8.32e-10!32;UBERON:0000033!1.64e-09!123;UBERON:0000924!1.95e-08!173;UBERON:0006601!1.95e-08!173;UBERON:0004121!3.17e-08!169;UBERON:0003056!5.29e-08!61;UBERON:0000956!2.04e-07!25;UBERON:0000203!2.04e-07!25;UBERON:0002619!3.32e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.27e-09;34!UBERON:0003528;3.61e-09;34!UBERON:0002020;3.61e-09;34!UBERON:0002791;5.66e-09;32!UBERON:0001869;5.78e-09;32!UBERON:0002780;8.08e-09;41!UBERON:0001890;8.08e-09;41!UBERON:0000073;1.63e-08;53!UBERON:0002616;1.63e-08;53!UBERON:0000956;1.82e-07;25!UBERON:0000203;1.82e-07;25!UBERON:0007023;2.57e-07;114!UBERON:0002619;2.71e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.45e-25,114;UBERON:0001049,4.57e-14,56;UBERON:0005068,4.57e-14,56;UBERON:0006241,4.57e-14,56;UBERON:0007135,4.57e-14,56;UBERON:0000955,7.92e-14,68;UBERON:0006238,7.92e-14,68;UBERON:0001016,8.57e-14,89;UBERON:0000073,1.14e-13,53;UBERON:0002616,1.14e-13,53;UBERON:0001017,1.23e-12,81;UBERON:0002780,7.90e-12,41;UBERON:0001890,7.90e-12,41;UBERON:0003080,7.90e-12,41;UBERON:0006240,7.90e-12,41;UBERON:0003528,1.09e-10,34;UBERON:0002020,1.09e-10,34;UBERON:0002346,1.14e-10,86;UBERON:0003075,1.55e-10,82;UBERON:0007284,1.55e-10,82;UBERON:0001893,1.75e-10,34;UBERON:0001869,8.32e-10,32;UBERON:0002791,8.69e-10,32;UBERON:0010314,3.89e-09,132;UBERON:0003056,5.14e-08,61;UBERON:0004121,9.88e-08,171;UBERON:0000924,9.88e-08,171;UBERON:0006601,9.88e-08,171;UBERON:0010371,1.57e-07,104;UBERON:0000956,2.04e-07,25;UBERON:0000203,2.04e-07,25;UBERON:0002619,3.32e-07,22 | |||
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| ||
|short_description=p1@RALBP1 | |||
}} | }} |
Latest revision as of 21:58, 24 September 2015
Short description: | p1@RALBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RALBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000383432, NM_006788, uc002koc.2_5end |
EntrezGene: | RALBP1 |
HGNC: | 9841 |
UniProt: | Q15311 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.45e-25 | 114 |
neural tube | 4.57e-14 | 56 |
neural rod | 4.57e-14 | 56 |
future spinal cord | 4.57e-14 | 56 |
neural keel | 4.57e-14 | 56 |
brain | 7.92e-14 | 68 |
future brain | 7.92e-14 | 68 |
nervous system | 8.57e-14 | 89 |
regional part of nervous system | 1.14e-13 | 53 |
regional part of brain | 1.14e-13 | 53 |
central nervous system | 1.23e-12 | 81 |
regional part of forebrain | 7.90e-12 | 41 |
forebrain | 7.90e-12 | 41 |
anterior neural tube | 7.90e-12 | 41 |
future forebrain | 7.90e-12 | 41 |
brain grey matter | 1.09e-10 | 34 |
gray matter | 1.09e-10 | 34 |
neurectoderm | 1.14e-10 | 86 |
neural plate | 1.55e-10 | 82 |
presumptive neural plate | 1.55e-10 | 82 |
telencephalon | 1.75e-10 | 34 |
cerebral hemisphere | 8.32e-10 | 32 |
regional part of telencephalon | 8.69e-10 | 32 |
structure with developmental contribution from neural crest | 3.89e-09 | 132 |
pre-chordal neural plate | 5.14e-08 | 61 |
ectoderm-derived structure | 9.88e-08 | 171 |
ectoderm | 9.88e-08 | 171 |
presumptive ectoderm | 9.88e-08 | 171 |
ecto-epithelium | 1.57e-07 | 104 |
cerebral cortex | 2.04e-07 | 25 |
pallium | 2.04e-07 | 25 |
regional part of cerebral cortex | 3.32e-07 | 22 |