FFCP PHASE1:Hg19::chr1:12677510..12677525,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:12677510..12677525,- to FFCP PHASE1:Hg19::chr1:12677510..12677525,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9249 | |EntrezGene=9249 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17693 | |HGNC=17693 | ||
|TSSclassifier=strong | |||
|UniProt=O75911 | |UniProt=O75911 | ||
|association_with_transcript=211bp_to_ENST00000376223_5end | |||
|cluster_id=chr1:12677510..12677525,- | |||
|coexpression_cluster_id=C928 | |||
|description=CAGE_peak_3_at_DHRS3_5end | |||
|id=chr1:12677510..12677525,- | |||
|ontology_enrichment_celltype=CL:0000183!2.64e-13!59;CL:0000187!3.27e-13!54;CL:0000222!5.63e-13!119;CL:0000359!3.37e-12!32;CL:0000192!3.81e-12!42;CL:0000514!3.81e-12!42;CL:0000680!1.12e-11!57;CL:0000056!1.12e-11!57;CL:0000355!1.12e-11!57;CL:0000393!2.06e-10!60;CL:0000211!2.06e-10!60;CL:0000220!1.45e-08!246;CL:0002321!1.95e-08!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.35e-11;32!CL:0000192;1.24e-08;43!CL:0000187;7.09e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.18e-13,121;CL:0000187,8.31e-13,55;CL:0000359,2.72e-12,32;CL:0000192,1.13e-11,43;CL:0000514,1.13e-11,43;CL:0000680,3.17e-11,58;CL:0000056,3.17e-11,58;CL:0000355,3.17e-11,58;CL:0000393,3.41e-10,61;CL:0000211,3.41e-10,61;CL:0002321,2.58e-08,250 | |||
|ontology_enrichment_development_v019=CL:0000514;1.24e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!7.04e-18!118;UBERON:0000490!5.20e-17!138;UBERON:0002100!7.62e-16!216;UBERON:0005256!2.25e-14!143;UBERON:0003104!9.75e-13!238;UBERON:0009142!9.75e-13!238;UBERON:0002385!9.56e-12!63;UBERON:0001015!9.56e-12!63;UBERON:0000383!9.56e-12!63;UBERON:0004111!1.02e-11!241;UBERON:0000481!1.87e-11!347;UBERON:0001637!2.38e-11!42;UBERON:0003509!2.38e-11!42;UBERON:0004572!2.38e-11!42;UBERON:0001134!2.72e-11!61;UBERON:0002036!2.72e-11!61;UBERON:0003082!2.72e-11!61;UBERON:0000483!1.64e-10!309;UBERON:0000475!1.67e-10!365;UBERON:0000119!2.02e-10!312;UBERON:0000466!3.04e-10!126;UBERON:0000477!5.44e-10!286;UBERON:0004573!9.51e-10!33;UBERON:0004571!9.51e-10!33;UBERON:0009569!2.30e-09!113;UBERON:0001981!4.40e-09!60;UBERON:0007500!4.40e-09!60;UBERON:0004537!4.40e-09!60;UBERON:0006965!4.40e-09!60;UBERON:0003064!5.26e-09!37;UBERON:0002049!1.49e-08!79;UBERON:0007798!1.49e-08!79;UBERON:0001009!1.95e-08!113;UBERON:0000055!2.98e-08!69;UBERON:0000025!3.10e-08!194;UBERON:0004535!3.17e-08!110;UBERON:0004872!3.53e-08!84;UBERON:0003929!3.69e-08!54;UBERON:0005911!7.00e-08!82;UBERON:0004921!8.72e-08!129;UBERON:0004185!8.72e-08!129;UBERON:0003103!1.40e-07!69;UBERON:0000486!1.49e-07!82;UBERON:0002417!1.69e-07!61;UBERON:0000916!1.69e-07!61;UBERON:0001008!2.16e-07!45;UBERON:0000926!3.27e-07!448;UBERON:0004120!3.27e-07!448;UBERON:0006603!3.27e-07!448;UBERON:0006554!3.91e-07!44;UBERON:0000468!4.03e-07!659;UBERON:0001007!4.44e-07!155;UBERON:0001555!4.44e-07!155;UBERON:0007026!4.44e-07!155;UBERON:0004290!4.88e-07!70;UBERON:0000058!5.28e-07!26;UBERON:0005177!6.07e-07!107;UBERON:0001048!7.90e-07!168;UBERON:0000464!9.28e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.18e-08;33!UBERON:0004571;1.18e-08;33!UBERON:0001637;6.66e-08;42!UBERON:0003509;6.66e-08;42!UBERON:0004572;6.66e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,6.66e-19,199;UBERON:0003914,2.73e-18,117;UBERON:0003104,2.99e-16,160;UBERON:0009142,2.99e-16,160;UBERON:0005256,3.16e-16,122;UBERON:0000490,3.48e-13,148;UBERON:0001637,1.95e-11,42;UBERON:0003509,1.95e-11,42;UBERON:0004572,1.95e-11,42;UBERON:0002385,2.51e-11,64;UBERON:0001015,2.51e-11,64;UBERON:0000383,2.51e-11,64;UBERON:0004111,2.62e-11,240;UBERON:0001134,7.15e-11,62;UBERON:0002036,7.15e-11,62;UBERON:0003082,7.15e-11,62;UBERON:0000483,1.99e-10,306;UBERON:0000119,2.59e-10,309;UBERON:0004573,8.05e-10,33;UBERON:0004571,8.05e-10,33;UBERON:0009569,2.71e-09,112;UBERON:0007500,4.08e-09,59;UBERON:0001981,4.08e-09,59;UBERON:0004537,4.08e-09,59;UBERON:0006965,4.08e-09,59;UBERON:0002049,1.34e-08,78;UBERON:0007798,1.34e-08,78;UBERON:0007503,1.36e-08,78;UBERON:0001009,2.44e-08,112;UBERON:0000055,2.50e-08,68;UBERON:0004535,3.96e-08,109;UBERON:0003929,4.00e-08,54;UBERON:0000025,5.09e-08,192;UBERON:0005911,5.65e-08,82;UBERON:0004872,6.14e-08,83;UBERON:0002417,6.76e-08,60;UBERON:0000916,6.76e-08,60;UBERON:0003103,9.30e-08,68;UBERON:0003064,1.55e-07,28;UBERON:0000486,2.19e-07,83;UBERON:0004921,2.70e-07,118;UBERON:0001008,5.25e-07,48;UBERON:0005177,5.39e-07,101;UBERON:0002329,6.26e-07,71;UBERON:0003059,6.26e-07,71;UBERON:0007282,6.26e-07,71;UBERON:0004290,6.26e-07,71;UBERON:0009618,6.26e-07,71;UBERON:0006554,9.35e-07,47 | |||
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| ||
|short_description=p3@DHRS3 | |||
}} | }} |
Latest revision as of 14:25, 16 September 2015
Short description: | p3@DHRS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DHRS3_5end |
Coexpression cluster: | C928_Retinal_Cardiac_mesothelioma_Renal_Meningeal_Smooth_Astrocyte |
Association with transcript: | 211bp_to_ENST00000376223_5end |
EntrezGene: | DHRS3 |
HGNC: | 17693 |
UniProt: | O75911 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.18e-13 | 121 |
muscle cell | 8.31e-13 | 55 |
vascular associated smooth muscle cell | 2.72e-12 | 32 |
smooth muscle cell | 1.13e-11 | 43 |
smooth muscle myoblast | 1.13e-11 | 43 |
muscle precursor cell | 3.17e-11 | 58 |
myoblast | 3.17e-11 | 58 |
multi-potent skeletal muscle stem cell | 3.17e-11 | 58 |
electrically responsive cell | 3.41e-10 | 61 |
electrically active cell | 3.41e-10 | 61 |
embryonic cell | 2.58e-08 | 250 |