FFCP PHASE1:Hg19::chr1:226862756..226862831,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:226862756..226862831,- to FFCP PHASE1:Hg19::chr1:226862756..226862831,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=41349 | |HGNC=41349 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000412918_5end | |||
|cluster_id=chr1:226862756..226862831,- | |||
|coexpression_cluster_id=C498 | |||
|description=CAGE_peak_1_at_ITPKB-IT1_5end | |||
|id=chr1:226862756..226862831,- | |||
|ontology_enrichment_celltype=CL:0000738!3.28e-55!140;CL:0000037!4.32e-53!172;CL:0000566!4.32e-53!172;CL:0000988!6.10e-50!182;CL:0002032!1.80e-49!165;CL:0000837!1.80e-49!165;CL:0002031!3.75e-46!124;CL:0002087!5.96e-46!119;CL:0000766!1.05e-29!76;CL:0000763!1.92e-26!112;CL:0000049!1.92e-26!112;CL:0000839!8.56e-25!70;CL:0002057!5.33e-24!42;CL:0000557!1.00e-22!71;CL:0002194!1.10e-21!63;CL:0000576!1.10e-21!63;CL:0000040!1.10e-21!63;CL:0000559!1.10e-21!63;CL:0000542!3.29e-21!53;CL:0000051!3.29e-21!53;CL:0000838!5.86e-21!52;CL:0000860!6.41e-21!45;CL:0002009!6.73e-21!65;CL:0000945!1.29e-10!24;CL:0000826!1.29e-10!24;CL:0000791!1.56e-10!18;CL:0000789!1.56e-10!18;CL:0002420!1.56e-10!18;CL:0002419!1.56e-10!18;CL:0000790!1.56e-10!18;CL:0000084!1.22e-09!25;CL:0000827!1.22e-09!25;CL:0000236!1.95e-09!14;CL:0002393!1.37e-07!9;CL:0002397!1.37e-07!9;CL:0000094!4.36e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.96e-23;33!CL:0002057;2.96e-23;33!CL:0000576;3.95e-20;48!CL:0000766;9.40e-19;69!CL:0000473;3.63e-17;39!CL:0000234;3.63e-17;39!CL:0002087;1.34e-16;104!CL:0000542;3.16e-15;53!CL:0000791;6.48e-15;18!CL:0000789;6.48e-15;18!CL:0002419;6.48e-15;18!CL:0000738;1.68e-13;136!CL:0000084;5.01e-13;25!CL:0000236;3.44e-12;13!CL:0000094;2.32e-10;8!CL:0000625;7.23e-10;11!CL:0000945;1.85e-09;24!CL:0000763;4.29e-09;100!CL:0000988;7.04e-09;177!CL:0000081;1.68e-08;11!CL:0000624;5.70e-08;6!CL:0002393;7.64e-08;6!CL:0002397;7.64e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.51e-64,136;CL:0002031,1.15e-55,120;CL:0002087,2.36e-55,115;CL:0000037,9.30e-55,168;CL:0000988,2.32e-51,177;CL:0002032,2.55e-51,161;CL:0000837,2.55e-51,161;CL:0000766,5.12e-40,72;CL:0000860,4.03e-35,42;CL:0002057,4.03e-35,42;CL:0000473,3.12e-32,48;CL:0000234,3.12e-32,48;CL:0000839,2.05e-31,66;CL:0000557,1.86e-29,67;CL:0002194,1.19e-27,59;CL:0000576,1.19e-27,59;CL:0000040,1.19e-27,59;CL:0000559,1.19e-27,59;CL:0000763,1.85e-26,108;CL:0000049,1.85e-26,108;CL:0002009,3.08e-26,61;CL:0000838,7.40e-24,52;CL:0000542,3.81e-23,53;CL:0000051,3.81e-23,53;CL:0000791,8.17e-15,18;CL:0000789,8.17e-15,18;CL:0002420,8.17e-15,18;CL:0002419,8.17e-15,18;CL:0000790,8.17e-15,18;CL:0000084,8.95e-13,25;CL:0000827,8.95e-13,25;CL:0002393,3.68e-11,9;CL:0002397,3.68e-11,9;CL:0000236,4.79e-11,14;CL:0000094,2.29e-10,8;CL:0000625,8.98e-10,11;CL:0000945,1.65e-09,24;CL:0000826,1.65e-09,24;CL:0000134,2.32e-09,354;CL:0002320,1.14e-08,361;CL:0000081,1.55e-08,11;CL:0000624,5.82e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;3.05e-25;42!CL:0000051;3.16e-15;53!CL:0000790;6.48e-15;18!CL:0000049;9.18e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.88e-29!102;UBERON:0003061!1.88e-29!102;UBERON:0002193!1.34e-27!112;UBERON:0007023!2.92e-24!115;UBERON:0002371!1.74e-18!80;UBERON:0001474!1.31e-16!86;UBERON:0002405!1.77e-13!115;UBERON:0004765!1.35e-12!101;UBERON:0001434!1.35e-12!101;UBERON:0000178!6.47e-10!15;UBERON:0000179!6.47e-10!15;UBERON:0000463!6.47e-10!15;UBERON:0001049!2.51e-07!57;UBERON:0005068!2.51e-07!57;UBERON:0006241!2.51e-07!57;UBERON:0007135!2.51e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.05e-12;15!UBERON:0000179;3.05e-12;15!UBERON:0000463;3.05e-12;15!UBERON:0002390;2.29e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.85e-38,98;UBERON:0003061,1.85e-38,98;UBERON:0002193,3.22e-36,108;UBERON:0002405,6.36e-26,93;UBERON:0002371,5.12e-25,76;UBERON:0001474,6.02e-22,82;UBERON:0004765,1.57e-18,90;UBERON:0001434,4.29e-15,100;UBERON:0000178,2.99e-12,15;UBERON:0000179,2.99e-12,15;UBERON:0000463,2.99e-12,15;UBERON:0007023,1.77e-11,114;UBERON:0003081,2.09e-11,203;UBERON:0002384,4.72e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.305653622991805,0.492603536699674,0.472264687882075,6.68719270643137,5.37361157336098,4.64448369948228,0,0,0.369754010166788,13.7891617032937,2.70121541726101,1.46800219667424,13.2958898047651,14.0381113229099,10.8505435357926,1.79132379391939,0.971680998056939,1.28787783817093,4.50734540216651,3.40088349319928,1.94067248950253,7.90258725479328,5.75635043230556,7.74265927237759,1.7261543539329,2.30544635876191,2.60130452877444,20.3399951634605,13.5551783552603,17.6054432572644,5.83551252582075,1.91034305040492,4.26974620445661,6.73384563215986,3.85114832491312,5.11469700639233,0.329851300186716,1.39624560335142,0.426224750532694,4.06292934080018,1.70215567407342,3.73693349397345,5.52747063564835,5.21482918420201,4.77815458351257,4.84319602106695,5.52416453981347,5.37986058649504,4.64761629886272,5.74031609905618,6.70907665626803,3.93150209012733,3.30389164251314,3.37523732063868,13.6806116995799,7.75775041076451,8.76787938070243,15.839662001519,18.0225741716503,21.3482220927253,16.6424786800938,23.2229672480887,20.1163353984069,16.5261218196216,22.8972901088487,20.4916668879401,11.7447437874188,22.5541204593885,0,0.560508562981536,1.84368859342554,12.7861350573992,16.5064520354649,8.63526295797939,0.83593247695339,13.6887351986108,13.2565385605725,1.94826728407911,1.89397776704795,4.41908861212256,4.2091439970888,3.79125409271022,2.43373507478783,1.1705341280389,3.28875809207352,1.65810010671509,1.44901542867526,6.52460877913066,4.54819407752512,7.31748666634838,0.679856056185397,5.3650869104269,3.77990190030893,3.28925599625354,2.54852331459277,5.20866763085135,5.70271226669025,1.6563263098555,1.02389288923535,4.99722906209383,1.18388626022008,1.64225599384209,4.43534835094411,9.62784704820626,11.1514790989755,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0.263504357079378,0.589405839739707,0,0,1.62273696827342,1.74129737299267,0.531831842075461,0.953962497221368,0.571994910780128,0.371457501329565,0,0,0.347140501607594,0,0,0,0,1.03366703667732,0,0,0,0,0.732186172644509,0.735326160691737,0,0.357198913136319,0,0.112611480483322,0,0,0.183201743930407,10.5424333948851,27.1446184903828,0,0,0,0.264818361626438,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0.336672227908132,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,5.29755719297581,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0.570762456703795,0,0,0.738651018262192,0.468008530278475,0.743155811443641,0.93733833986777,0,0,0.0895585227028483,0,0,3.94130590316755,1.76096868026452,9.74442143041629,2.01767934783746,7.19581870530366,0.190493682876507,0.381988425558278,0,0,0.308482478109971,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,3.64871341923571,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0.336255431980582,8.27529192848094,13.3689096412901,12.0642454102963,0,0,0.773288812777695,0.167516265334349,0,17.9761685747324,11.966458368161,22.3784377255459,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,8.47748907103838,10.5699958401122,6.40365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.657779629937804,1.3071772551245,0,0,0,0.9273691048295,0,0.41254749960294,0,0,0,0.096670718292122,0,0,0,0,0.290033387828457,0.255679882248303,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0.192444225451024,0,0,0.376575203107117,0,0,0,0,7.10426652925037,7.64637207142375,13.6715324921799,8.09988036556483,13.9863172849306,7.13320642311989,10.2605973075242,6.34500141035416,0,0,0,0.929015875628594,0.28853842595289,2.20539714380084,0.318852545457645,0.399158742865633,0.957526850661834,1.48171507906718,0.324621940274555,0.842391534340376,3.19528550646469,0,2.50634477090067,0.677167111206413,0.481764225311099,0.201799707191048,1.70338495076131,0.687010689511529,0,0.447352215784832,0.166849141711909,0.390776190804081,0,0,1.08182271390393,0.33307196799782,0,0,1.17206543417515,0.121360521749513,0.334330152832435,0,0,0,0,0.994147647766298,2.53204949538923,0,0,0,2.19172787076177,7.18338180380984,0.251932747854276,0.409074730008619,0.123084805461069,0,0,0,0,2.86065876347107,4.7896618469388,0,1.93866549219044,0.371072392647405,1.99613798001194,0,0.0874599999961957,1.44999915086959,0,0,0,0.344743373241465,0,0.173624994933292,0.885741385813839,0.964771509003264,0,1.10579259931225,0,0.219385397153973,0,0,1.30815439456455,0,0,0,0,0,0.0915975934018623,0.533034776018635,2.04386596391473,1.56980256395025,0.664846727600626,0,0,0,0,0.317873157960757,0.421996129056054,0.326465616318295,0,0,2.98578579323551,0.619202951523374,0.611030144933625,2.6686901581256,0.494255755786011,0.7309536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| ||
|short_description=p1@ITPKB-IT1 | |||
}} | }} |
Latest revision as of 01:51, 16 September 2015
Short description: | p1@ITPKB-IT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ITPKB-IT1_5end |
Coexpression cluster: | C498_Eosinophils_Neutrophils_CD19_Burkitt_diffuse_lymphoma_CD14 |
Association with transcript: | 0bp_to_ENST00000412918_5end |
EntrezGene: | NA |
HGNC: | 41349 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.85e-38 | 98 |
blood island | 1.85e-38 | 98 |
hemolymphoid system | 3.22e-36 | 108 |
immune system | 6.36e-26 | 93 |
bone marrow | 5.12e-25 | 76 |
bone element | 6.02e-22 | 82 |
skeletal element | 1.57e-18 | 90 |
skeletal system | 4.29e-15 | 100 |
blood | 2.99e-12 | 15 |
haemolymphatic fluid | 2.99e-12 | 15 |
organism substance | 2.99e-12 | 15 |
adult organism | 1.77e-11 | 114 |
lateral plate mesoderm | 2.09e-11 | 203 |
connective tissue | 4.72e-08 | 371 |