FFCP PHASE1:Hg19::chr3:111260980..111261016,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:111260980..111261016,+ to FFCP PHASE1:Hg19::chr3:111260980..111261016,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10225 | |EntrezGene=10225 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16892 | |HGNC=16892 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WUE2 | |UniProt=Q8WUE2 | ||
|association_with_transcript=0bp_to_ENST00000438817_5end | |||
|cluster_id=chr3:111260980..111261016,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_CD96_5end | |||
|id=chr3:111260980..111261016,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.29e-42!172;CL:0000566!3.29e-42!172;CL:0000988!9.61e-41!182;CL:0000738!6.68e-38!140;CL:0002032!1.21e-37!165;CL:0000837!1.21e-37!165;CL:0002087!1.15e-30!119;CL:0002031!4.15e-29!124;CL:0000542!1.43e-28!53;CL:0000051!1.43e-28!53;CL:0000838!1.90e-28!52;CL:0000084!1.68e-21!25;CL:0000827!1.68e-21!25;CL:0000791!5.80e-18!18;CL:0000789!5.80e-18!18;CL:0002420!5.80e-18!18;CL:0002419!5.80e-18!18;CL:0000790!5.80e-18!18;CL:0000763!6.16e-13!112;CL:0000049!6.16e-13!112;CL:0000625!6.92e-12!11;CL:0000236!7.00e-09!14;CL:0000766!9.04e-09!76;CL:0002057!4.32e-08!42;CL:0000945!2.08e-07!24;CL:0000826!2.08e-07!24;CL:0000134!2.50e-07!358;CL:0000860!5.38e-07!45;CL:0000624!7.41e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;5.38e-28;25!CL:0000791;5.88e-26;18!CL:0000789;5.88e-26;18!CL:0002419;5.88e-26;18!CL:0000542;8.91e-18;53!CL:0000625;6.69e-17;11!CL:0000236;1.31e-10;13!CL:0000624;1.90e-09;6!CL:0002087;1.69e-08;104!CL:0000094;9.85e-08;8!CL:0000738;5.37e-07;136!CL:0000081;7.99e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.67e-35,177;CL:0000037,1.29e-34,168;CL:0000738,3.72e-30,136;CL:0000838,1.43e-29,52;CL:0002032,2.90e-29,161;CL:0000837,2.90e-29,161;CL:0000542,9.24e-29,53;CL:0000051,9.24e-29,53;CL:0000084,5.56e-28,25;CL:0000827,5.56e-28,25;CL:0000791,5.87e-26,18;CL:0000789,5.87e-26,18;CL:0002420,5.87e-26,18;CL:0002419,5.87e-26,18;CL:0000790,5.87e-26,18;CL:0002087,1.61e-22,115;CL:0002031,5.62e-21,120;CL:0000625,6.60e-17,11;CL:0000236,9.79e-10,14;CL:0000624,1.93e-09,6;CL:0000094,9.14e-08,8;CL:0000763,1.26e-07,108;CL:0000049,1.26e-07,108;CL:0000081,7.60e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;5.88e-26;18!CL:0000051;8.91e-18;53 | |||
|ontology_enrichment_disease=DOID:2531!4.22e-07!51;DOID:0060083!4.22e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.86e-17!115;UBERON:0002390!5.59e-14!102;UBERON:0003061!5.59e-14!102;UBERON:0000178!5.24e-13!15;UBERON:0000179!5.24e-13!15;UBERON:0000463!5.24e-13!15;UBERON:0002193!1.60e-12!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.22e-18;15!UBERON:0000179;1.22e-18;15!UBERON:0000463;1.22e-18;15!UBERON:0002390;1.48e-11;32!UBERON:0002193;7.65e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.42e-18,15;UBERON:0000179,1.42e-18,15;UBERON:0000463,1.42e-18,15;UBERON:0002390,3.87e-10,98;UBERON:0003061,3.87e-10,98;UBERON:0002193,1.18e-09,108;UBERON:0004177,2.25e-07,7;UBERON:0005057,2.25e-07,7;UBERON:0002370,7.94e-07,4;UBERON:0005058,7.94e-07,4;UBERON:0009113,7.94e-07,4;UBERON:0003295,7.94e-07,4;UBERON:0005562,7.94e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.305653622991805,0.328402357799783,0.314843125254717,8.26064981382698,37.2314516154296,7.7408061658038,0,0,0,0.154934401160603,0,1.17440175733939,12.7418943962332,8.02177789880567,12.1526087600877,1.56740831967947,11.3362783106643,3.09090681161024,0.581592955118259,0.755751887377619,1.4555043671269,1.16214518452842,0.822335776043652,0,0.28769239232215,0.512321413058201,0.47296445977717,0.689491361473237,2.5819387343353,2.70852973188684,0.376484679085209,0.818718450173537,0.674170453335254,2.14258724659632,1.60464513538047,0,0.989553900560148,0.199463657621632,0,0.870627715885752,1.70215567407342,0.622822248995575,1.50749199154046,2.08593167368081,0.217188844705117,1.81619850790011,1.10483290796269,0.632924774881769,0,0.212604299965044,0,0,0,0,0,0,0,1.75996244461323,4.91524750135918,4.44754626931777,1.28019066769952,1.20118796110804,1.72425731986345,1.32208974556972,2.86216126360609,12.5226853204079,3.52342313622563,5.73409842187843,0,12.8916969485753,3.95076127162616,59.0129310341499,27.9037641551907,42.5595102928984,55.1715434789238,32.2663043967255,38.3492722645134,25.3274746930285,78.4329616471622,31.8174380072824,33.0085502929595,43.0578143386375,32.2790125708701,34.4657271033677,83.5344555386675,75.1672048377508,96.7942306355075,55.7557477489347,55.1134105864809,54.3584723785879,94.7266104951653,63.9978224315208,64.2583323052518,93.3642663551965,60.8459941359025,57.9464273932212,50.3739583557638,59.4771720357202,83.3192838615264,43.7257542933211,72.9273936295572,64.8691117567627,67.9414724667348,46.2671538705468,42.8680235493085,0,0,0.767175371061182,0,0,0,0,0,0,0,0.263504357079378,0.72038491523742,0,0,0,0.522389211897802,0.26591592103773,0.953962497221368,1.14398982156026,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,15.511210565933,0,0,0,0,0,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0.340296549480063,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,17.658523976586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,1.03664057770386,0,2.27236380167484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.5904780142912,58.5181357799724,37.3035704506965,38.1178817750853,0,0,0,0,0,0,17.9496875522415,4.97298616123243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.3573324670137,28.0428461064202,26.0415241040404,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,1.0457418040996,0,0,0,1.44257416306811,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,1.239293992399,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,1.88287601553558,0,0,0,0,23.3425900246798,19.8805673857018,13.1018853050057,27.6348859531035,28.3839968429474,16.8603060910106,17.8210374288578,14.2762531732969,0,0,0,0.185803175125719,8.80042199156314,0.355709216742071,5.26106700005114,31.7331200578178,40.216127727797,0,8.11554850686389,86.7663280370588,0.912938716132769,0.783399478865116,0,0,0,0,0,0.343505344755765,0,0,0,0,6.68174817348582,0,5.40911356951966,7.99372723194768,16.9184406105419,0,1.46508179271894,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,5.43852784948307,0,1.79323189425963,13.5379118610262,0,0,0,0,0,0,0,3.94573622547734,14.3689855408164,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0.295547618953547,0,0,0,1.53900517007594,0.227884111694002,0,0,0,0.957003479195758,0.0915975934018623,1.5991043280559,21.4605926211047,5.65128923022089,0,0,0.19606253431774,0,3.98482838720789,12.5559897394499,0,0,0,0,1.99052386215701,4.42287822516696,2.4441205797345,7.11650708833493,5.06612149680662,4.38572187922913,0.202203398942031,0.802577647298789,0.234264445725339,0.182454789215666,0,0,0.394584402849391,4.83962864194656,1.22429104652196,2.02197054811161,0,0,0,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0,1.55182426381471,0,0.225980740780532,0,0.19871461170299,0.189932387867636,0,0,2.13452994739353,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0.429765441419957,8.14950798265875,0.837847203816763,0.916641696046735,0,0.199679000498991,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0.2249738915515,0,0,0,1.18208560948797,0.104909176269996,0,0,0,2.1440859791201,0,0,0,0,0,0,0.082092520749339,0,0,0.58620893471233,0,0.129282956361551,0.26446520348538,0,0,5.87330769122321,1.41483874589699,4.14239055347196,14.3888146325466,0,0.243585196761792,0,0.544017803369474,0,0,0,0,0,0,0.1251909307065,1.72022758707021,1.10929051536852,0.248385611765534,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67664741214532,1.19578356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| ||
|short_description=p2@CD96 | |||
}} | }} |
Latest revision as of 12:33, 19 September 2015
Short description: | p2@CD96 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CD96_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000438817_5end |
EntrezGene: | CD96 |
HGNC: | 16892 |
UniProt: | Q8WUE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.67e-35 | 177 |
hematopoietic stem cell | 1.29e-34 | 168 |
leukocyte | 3.72e-30 | 136 |
lymphoid lineage restricted progenitor cell | 1.43e-29 | 52 |
hematopoietic oligopotent progenitor cell | 2.90e-29 | 161 |
hematopoietic multipotent progenitor cell | 2.90e-29 | 161 |
lymphocyte | 9.24e-29 | 53 |
common lymphoid progenitor | 9.24e-29 | 53 |
T cell | 5.56e-28 | 25 |
pro-T cell | 5.56e-28 | 25 |
mature alpha-beta T cell | 5.87e-26 | 18 |
alpha-beta T cell | 5.87e-26 | 18 |
immature T cell | 5.87e-26 | 18 |
mature T cell | 5.87e-26 | 18 |
immature alpha-beta T cell | 5.87e-26 | 18 |
nongranular leukocyte | 1.61e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 5.62e-21 | 120 |
CD8-positive, alpha-beta T cell | 6.60e-17 | 11 |
B cell | 9.79e-10 | 14 |
CD4-positive, alpha-beta T cell | 1.93e-09 | 6 |
granulocyte | 9.14e-08 | 8 |
myeloid cell | 1.26e-07 | 108 |
common myeloid progenitor | 1.26e-07 | 108 |
blood cell | 7.60e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
blood | 1.42e-18 | 15 |
haemolymphatic fluid | 1.42e-18 | 15 |
organism substance | 1.42e-18 | 15 |
hematopoietic system | 3.87e-10 | 98 |
blood island | 3.87e-10 | 98 |
hemolymphoid system | 1.18e-09 | 108 |
hemopoietic organ | 2.25e-07 | 7 |
immune organ | 2.25e-07 | 7 |
thymus | 7.94e-07 | 4 |
hemolymphoid system gland | 7.94e-07 | 4 |
thymic region | 7.94e-07 | 4 |
pharyngeal gland | 7.94e-07 | 4 |
thymus primordium | 7.94e-07 | 4 |