FFCP PHASE1:Hg19::chr3:126243162..126243176,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:126243162..126243176,+ to FFCP PHASE1:Hg19::chr3:126243162..126243176,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=166012 | |EntrezGene=166012 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21755 | |HGNC=21755 | ||
|TSSclassifier=strong | |||
|UniProt=Q3SYA3 | |UniProt=Q3SYA3 | ||
|association_with_transcript=0bp_to_ENST00000383575,uc003eja.2_5end | |||
|cluster_id=chr3:126243162..126243176,+ | |||
|coexpression_cluster_id=C4278 | |||
|description=CAGE_peak_3_at_CHST13_5end | |||
|id=chr3:126243162..126243176,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.59e-34!76;CL:0000839!1.65e-32!70;CL:0000763!2.80e-31!112;CL:0000049!2.80e-31!112;CL:0000557!1.68e-30!71;CL:0002009!1.40e-27!65;CL:0002194!3.19e-27!63;CL:0000576!3.19e-27!63;CL:0000040!3.19e-27!63;CL:0000559!3.19e-27!63;CL:0000988!9.25e-18!182;CL:0000037!1.08e-17!172;CL:0000566!1.08e-17!172;CL:0002057!3.49e-17!42;CL:0002032!1.12e-16!165;CL:0000837!1.12e-16!165;CL:0000860!1.83e-15!45;CL:0000738!3.16e-15!140;CL:0002031!2.34e-14!124;CL:0002393!1.68e-12!9;CL:0002397!1.68e-12!9;CL:0002087!2.43e-11!119 | |||
|ontology_enrichment_celltype_v019=CL:0000235;4.99e-19;6!CL:0000182;1.58e-17;12!CL:0002619;4.39e-14;3!CL:0000766;2.11e-12;69!CL:0000097;9.11e-09;5!CL:0000576;2.96e-08;48!CL:0002393;8.21e-07;6!CL:0002397;8.21e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.40e-28,72;CL:0000839,1.60e-23,66;CL:0000557,4.20e-23,67;CL:0000235,4.25e-19,6;CL:0002194,4.75e-19,59;CL:0000576,4.75e-19,59;CL:0000040,4.75e-19,59;CL:0000559,4.75e-19,59;CL:0000763,9.63e-19,108;CL:0000049,9.63e-19,108;CL:0002009,2.68e-18,61;CL:0000182,9.24e-18,12;CL:0000473,2.18e-14,48;CL:0000234,2.18e-14,48;CL:0002619,3.94e-14,3;CL:0000738,1.88e-12,136;CL:0002393,2.41e-11,9;CL:0002397,2.41e-11,9;CL:0000037,4.35e-11,168;CL:0002031,8.01e-11,120;CL:0002032,1.03e-10,161;CL:0000837,1.03e-10,161;CL:0000988,3.13e-10,177;CL:0000097,1.12e-08,5;CL:0002028,1.12e-08,5;CL:0002087,6.88e-08,115 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.43e-14;11!UBERON:0009497;4.95e-12;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.54e-40!102;UBERON:0003061!3.54e-40!102;UBERON:0002193!7.08e-36!112;UBERON:0002405!4.08e-29!115;UBERON:0002371!6.70e-27!80;UBERON:0001474!2.21e-26!86;UBERON:0004765!3.87e-20!101;UBERON:0001434!3.87e-20!101;UBERON:0000178!1.19e-15!15;UBERON:0000179!1.19e-15!15;UBERON:0000463!1.19e-15!15;UBERON:0003081!1.88e-09!216;UBERON:0000926!5.11e-08!448;UBERON:0004120!5.11e-08!448;UBERON:0006603!5.11e-08!448;UBERON:0002204!8.51e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;8.21e-18;19!UBERON:0006925;8.21e-18;19!UBERON:0002423;3.94e-13;25!UBERON:0002365;5.41e-10;31!UBERON:0002330;5.41e-10;31!UBERON:0002368;9.27e-09;33!UBERON:0000178;5.26e-07;15!UBERON:0000179;5.26e-07;15!UBERON:0000463;5.26e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.02e-25,98;UBERON:0003061,2.02e-25,98;UBERON:0002193,1.68e-22,108;UBERON:0002371,6.02e-22,76;UBERON:0001474,5.60e-20,82;UBERON:0002107,5.40e-18,19;UBERON:0006925,5.40e-18,19;UBERON:0008836,5.40e-18,19;UBERON:0004765,9.24e-18,90;UBERON:0002405,5.00e-17,93;UBERON:0001434,1.74e-15,100;UBERON:0008835,2.63e-15,22;UBERON:0003894,2.63e-15,22;UBERON:0009854,1.44e-14,23;UBERON:0007499,2.89e-13,25;UBERON:0009497,2.89e-13,25;UBERON:0000015,2.89e-13,25;UBERON:0002423,2.89e-13,25;UBERON:0006235,2.89e-13,25;UBERON:0004161,2.89e-13,25;UBERON:0009856,1.09e-12,26;UBERON:0002365,2.27e-10,31;UBERON:0002330,2.27e-10,31;UBERON:0003081,3.98e-09,203;UBERON:0002368,5.38e-09,35;UBERON:0002204,3.47e-08,167;UBERON:0000178,6.34e-07,15;UBERON:0000179,6.34e-07,15;UBERON:0000463,6.34e-07,15 | |||
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| ||
|short_description=p3@CHST13 | |||
}} | }} |
Latest revision as of 04:29, 20 September 2015
Short description: | p3@CHST13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CHST13_5end |
Coexpression cluster: | C4278_liver_Monocytederived_hepatocellular_Macrophage_Hepatocyte_CD14_small |
Association with transcript: | 0bp_to_ENST00000383575, uc003eja.2_5end |
EntrezGene: | CHST13 |
HGNC: | 21755 |
UniProt: | Q3SYA3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.40e-28 | 72 |
myeloid lineage restricted progenitor cell | 1.60e-23 | 66 |
granulocyte monocyte progenitor cell | 4.20e-23 | 67 |
macrophage | 4.25e-19 | 6 |
monopoietic cell | 4.75e-19 | 59 |
monocyte | 4.75e-19 | 59 |
monoblast | 4.75e-19 | 59 |
promonocyte | 4.75e-19 | 59 |
myeloid cell | 9.63e-19 | 108 |
common myeloid progenitor | 9.63e-19 | 108 |
macrophage dendritic cell progenitor | 2.68e-18 | 61 |
hepatocyte | 9.24e-18 | 12 |
defensive cell | 2.18e-14 | 48 |
phagocyte | 2.18e-14 | 48 |
adult endothelial progenitor cell | 3.94e-14 | 3 |
leukocyte | 1.88e-12 | 136 |
intermediate monocyte | 2.41e-11 | 9 |
CD14-positive, CD16-positive monocyte | 2.41e-11 | 9 |
hematopoietic stem cell | 4.35e-11 | 168 |
hematopoietic lineage restricted progenitor cell | 8.01e-11 | 120 |
hematopoietic oligopotent progenitor cell | 1.03e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.03e-10 | 161 |
hematopoietic cell | 3.13e-10 | 177 |
mast cell | 1.12e-08 | 5 |
basophil mast progenitor cell | 1.12e-08 | 5 |
nongranular leukocyte | 6.88e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.02e-25 | 98 |
blood island | 2.02e-25 | 98 |
hemolymphoid system | 1.68e-22 | 108 |
bone marrow | 6.02e-22 | 76 |
bone element | 5.60e-20 | 82 |
liver | 5.40e-18 | 19 |
digestive gland | 5.40e-18 | 19 |
liver bud | 5.40e-18 | 19 |
skeletal element | 9.24e-18 | 90 |
immune system | 5.00e-17 | 93 |
skeletal system | 1.74e-15 | 100 |
hepatic diverticulum | 2.63e-15 | 22 |
liver primordium | 2.63e-15 | 22 |
digestive tract diverticulum | 1.44e-14 | 23 |
epithelial sac | 2.89e-13 | 25 |
epithelium of foregut-midgut junction | 2.89e-13 | 25 |
anatomical boundary | 2.89e-13 | 25 |
hepatobiliary system | 2.89e-13 | 25 |
foregut-midgut junction | 2.89e-13 | 25 |
septum transversum | 2.89e-13 | 25 |
sac | 1.09e-12 | 26 |
exocrine gland | 2.27e-10 | 31 |
exocrine system | 2.27e-10 | 31 |
lateral plate mesoderm | 3.98e-09 | 203 |
endocrine gland | 5.38e-09 | 35 |
musculoskeletal system | 3.47e-08 | 167 |
blood | 6.34e-07 | 15 |
haemolymphatic fluid | 6.34e-07 | 15 |
organism substance | 6.34e-07 | 15 |